RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 ADAMTS4O75173 837 aa27.34■■□□□ 1.97
SCN1B-201ENST00000262631 PSAPP07602 524 aa27.34■■□□□ 1.97
SCN1B-201ENST00000262631 C6orf222P0C671 652 aaPredicted RBP27.34■■□□□ 1.97
SCN1B-201ENST00000262631 CCL5P13501 91 aa27.34■■□□□ 1.97
SCN1B-201ENST00000262631 PFKFB1P16118 471 aa27.34■■□□□ 1.97
SCN1B-201ENST00000262631 RPA1P27694 616 aa27.34■■□□□ 1.97
SCN1B-201ENST00000262631 NDUFA8P51970 172 aa27.34■■□□□ 1.97
SCN1B-201ENST00000262631 ARMC5Q96C12 935 aa27.34■■□□□ 1.97
SCN1B-201ENST00000262631 PLIN2Q99541 437 aa27.34■■□□□ 1.97
SCN1B-201ENST00000262631 PAK6Q9NQU5 681 aaPredicted RBP27.34■■□□□ 1.97
SCN1B-201ENST00000262631 GABBR1Q9UBS5 961 aa27.34■■□□□ 1.97
SCN1B-201ENST00000262631 HPSEQ9Y251 543 aa27.34■■□□□ 1.97
SCN1B-201ENST00000262631 HOXD8P13378 290 aaPredicted RBP27.33■■□□□ 1.97
SCN1B-201ENST00000262631 FSCN1Q16658 493 aaKnown RBP27.33■■□□□ 1.97
SCN1B-201ENST00000262631 HAUS3Q68CZ6 603 aa27.33■■□□□ 1.97
SCN1B-201ENST00000262631 PDILTQ8N807 584 aa27.33■■□□□ 1.97
SCN1B-201ENST00000262631 LRRC15Q8TF66 581 aa27.33■■□□□ 1.97
SCN1B-201ENST00000262631 PNMA5Q96PV4 448 aa27.33■■□□□ 1.97
SCN1B-201ENST00000262631 LXNQ9BS40 222 aa27.33■■□□□ 1.97
SCN1B-201ENST00000262631 POLR3CQ9BUI4 534 aaPredicted RBP27.33■■□□□ 1.97
SCN1B-201ENST00000262631 BACH1O14867 736 aa27.33■■□□□ 1.97
SCN1B-201ENST00000262631 P4HBP07237 508 aaKnown RBP27.33■■□□□ 1.97
SCN1B-201ENST00000262631 GRB10Q13322 594 aa27.33■■□□□ 1.97
SCN1B-201ENST00000262631 UTP14CQ5TAP6 766 aaKnown RBP27.33■■□□□ 1.97
SCN1B-201ENST00000262631 POTEGQ6S5H5 508 aa27.33■■□□□ 1.97
SCN1B-201ENST00000262631 TPH2Q8IWU9 490 aa27.33■■□□□ 1.97
SCN1B-201ENST00000262631 MCOLN1Q9GZU1 580 aa27.33■■□□□ 1.97
SCN1B-201ENST00000262631 RNF208Q9H0X6 261 aa27.33■■□□□ 1.97
SCN1B-201ENST00000262631 A0A087WWV3 80 aa27.32■■□□□ 1.96
SCN1B-201ENST00000262631 FAM237AA0A1B0GTK4 181 aa27.32■■□□□ 1.96
SCN1B-201ENST00000262631 ZNF862O60290 1169 aa27.32■■□□□ 1.96
SCN1B-201ENST00000262631 MSCO60682 206 aa27.32■■□□□ 1.96
SCN1B-201ENST00000262631 PPFIA4O75335 1185 aa27.32■■□□□ 1.96
SCN1B-201ENST00000262631 ZNF286BP0CG31 522 aa27.32■■□□□ 1.96
SCN1B-201ENST00000262631 LIG1P18858 919 aa27.32■■□□□ 1.96
SCN1B-201ENST00000262631 CPT1AP50416 773 aa27.32■■□□□ 1.96
SCN1B-201ENST00000262631 FAM13BQ9NYF5 915 aa27.32■■□□□ 1.96
SCN1B-201ENST00000262631 KCNH3Q9ULD8 1083 aa27.32■■□□□ 1.96
SCN1B-201ENST00000262631 LGR5O75473 907 aa27.31■■□□□ 1.96
SCN1B-201ENST00000262631 TXLNAP40222 546 aa27.31■■□□□ 1.96
SCN1B-201ENST00000262631 QARSP47897 775 aaKnown RBP27.31■■□□□ 1.96
SCN1B-201ENST00000262631 NKX3-2P78367 333 aa27.31■■□□□ 1.96
SCN1B-201ENST00000262631 DGKDQ16760 1214 aa27.31■■□□□ 1.96
SCN1B-201ENST00000262631 GNASQ5JWF2 1037 aa27.31■■□□□ 1.96
SCN1B-201ENST00000262631 HYIQ5T013 277 aa27.31■■□□□ 1.96
SCN1B-201ENST00000262631 TUFT1Q9NNX1 390 aa27.31■■□□□ 1.96
SCN1B-201ENST00000262631 ZNF302Q9NR11 478 aa27.31■■□□□ 1.96
SCN1B-201ENST00000262631 KIAA1024Q9UPX6 916 aa27.31■■□□□ 1.96
SCN1B-201ENST00000262631 MAFBQ9Y5Q3 323 aaPredicted RBP27.31■■□□□ 1.96
SCN1B-201ENST00000262631 IGSF9BQ9UPX0 1349 aa27.31■■□□□ 1.96
SCN1B-201ENST00000262631 ZBTB39O15060 712 aa27.3■■□□□ 1.96
SCN1B-201ENST00000262631 LGALS2P05162 132 aa27.3■■□□□ 1.96
SCN1B-201ENST00000262631 PLCG1P19174 1290 aa27.3■■□□□ 1.96
SCN1B-201ENST00000262631 KCNK18Q7Z418 384 aa27.3■■□□□ 1.96
SCN1B-201ENST00000262631 NEK9Q8TD19 979 aa27.3■■□□□ 1.96
SCN1B-201ENST00000262631 DEFB118Q96PH6 123 aa27.3■■□□□ 1.96
SCN1B-201ENST00000262631 C16orf70Q9BSU1 422 aa27.3■■□□□ 1.96
SCN1B-201ENST00000262631 STK24Q9Y6E0 443 aa27.3■■□□□ 1.96
SCN1B-201ENST00000262631 EMSYQ7Z589 1322 aa27.3■■□□□ 1.96
SCN1B-201ENST00000262631 DDX11L8A8MPP1 907 aa27.3■■□□□ 1.96
SCN1B-201ENST00000262631 POLR2DO15514 142 aaKnown RBP27.3■■□□□ 1.96
SCN1B-201ENST00000262631 MYCNP04198 464 aaPredicted RBP27.3■■□□□ 1.96
SCN1B-201ENST00000262631 ATP4AP20648 1035 aa27.3■■□□□ 1.96
SCN1B-201ENST00000262631 PSMC5P62195 406 aa27.3■■□□□ 1.96
SCN1B-201ENST00000262631 PSMC6P62333 389 aa27.3■■□□□ 1.96
SCN1B-201ENST00000262631 TMEM119Q4V9L6 283 aa27.3■■□□□ 1.96
SCN1B-201ENST00000262631 TRMT1LQ7Z2T5 733 aaKnown RBP27.3■■□□□ 1.96
SCN1B-201ENST00000262631 KLHDC9Q8NEP7 349 aa27.3■■□□□ 1.96
SCN1B-201ENST00000262631 RASSF8Q8NHQ8 419 aa27.3■■□□□ 1.96
SCN1B-201ENST00000262631 GLG1Q92896 1179 aa27.3■■□□□ 1.96
SCN1B-201ENST00000262631 SPC25Q9HBM1 224 aa27.3■■□□□ 1.96
SCN1B-201ENST00000262631 DDX19AQ9NUU7 478 aaKnown RBP27.3■■□□□ 1.96
SCN1B-201ENST00000262631 STAT5BP51692 787 aa27.29■■□□□ 1.96
SCN1B-201ENST00000262631 SNW1Q13573 536 aaKnown RBP27.29■■□□□ 1.96
SCN1B-201ENST00000262631 NFKBIBQ15653 356 aa27.29■■□□□ 1.96
SCN1B-201ENST00000262631 PDXDC2PQ6P474 469 aa27.29■■□□□ 1.96
SCN1B-201ENST00000262631 ENGASEQ8NFI3 743 aa27.29■■□□□ 1.96
SCN1B-201ENST00000262631 GPT2Q8TD30 523 aa27.29■■□□□ 1.96
SCN1B-201ENST00000262631 AFAP1L1Q8TED9 768 aa27.29■■□□□ 1.96
SCN1B-201ENST00000262631 CALML4Q96GE6 196 aa27.29■■□□□ 1.96
SCN1B-201ENST00000262631 ZSWIM4Q9H7M6 989 aa27.29■■□□□ 1.96
SCN1B-201ENST00000262631 KDM3AQ9Y4C1 1321 aa27.28■■□□□ 1.96
SCN1B-201ENST00000262631 NR1I2O75469 434 aa27.28■■□□□ 1.96
SCN1B-201ENST00000262631 E2F4Q16254 413 aa27.28■■□□□ 1.96
SCN1B-201ENST00000262631 NAALADL2Q58DX5 795 aa27.28■■□□□ 1.96
SCN1B-201ENST00000262631 FMR1NBQ8N0W7 255 aaPredicted RBP27.28■■□□□ 1.96
SCN1B-201ENST00000262631 ATP6V0A1Q93050 837 aa27.28■■□□□ 1.96
SCN1B-201ENST00000262631 CDK5RAP3Q96JB5 506 aa27.28■■□□□ 1.96
SCN1B-201ENST00000262631 AZI2Q9H6S1 392 aa27.28■■□□□ 1.96
SCN1B-201ENST00000262631 DNAH12Q6ZR08 3092 aa27.28■■□□□ 1.96
SCN1B-201ENST00000262631 TMEM150BA6NC51 233 aa27.27■■□□□ 1.96
SCN1B-201ENST00000262631 MARK3P27448 753 aa27.27■■□□□ 1.96
SCN1B-201ENST00000262631 SYKP43405 635 aa27.27■■□□□ 1.96
SCN1B-201ENST00000262631 LRRC41Q15345 812 aa27.27■■□□□ 1.96
SCN1B-201ENST00000262631 BRDTQ58F21 947 aaPredicted RBP27.27■■□□□ 1.96
SCN1B-201ENST00000262631 FAM160B1Q5W0V3 765 aa27.27■■□□□ 1.96
SCN1B-201ENST00000262631 CCSAPQ6IQ19 270 aaPredicted RBP27.27■■□□□ 1.96
SCN1B-201ENST00000262631 CCDC73Q6ZRK6 1079 aa27.27■■□□□ 1.96
SCN1B-201ENST00000262631 PIGOQ8TEQ8 1089 aa27.27■■□□□ 1.96
SCN1B-201ENST00000262631 DHX58Q96C10 678 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms