RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 LDHBP07195 334 aaKnown RBP14.24□□□□□ -0.13
SNX1-201ENST00000261889 RSPH10BP0C881 870 aa14.24□□□□□ -0.13
SNX1-201ENST00000261889 MDH1P40925 334 aaKnown RBP14.24□□□□□ -0.13
SNX1-201ENST00000261889 CASP4P49662 377 aa14.24□□□□□ -0.13
SNX1-201ENST00000261889 PSMC6P62333 389 aa14.24□□□□□ -0.13
SNX1-201ENST00000261889 GRM4Q14833 912 aa14.24□□□□□ -0.13
SNX1-201ENST00000261889 MAEAQ7L5Y9 396 aa14.24□□□□□ -0.13
SNX1-201ENST00000261889 NBPF5PQ86XG9 351 aaPredicted RBP14.24□□□□□ -0.13
SNX1-201ENST00000261889 CYFIP2Q96F07 1278 aa14.24□□□□□ -0.13
SNX1-201ENST00000261889 PANK4Q9NVE7 773 aa14.24□□□□□ -0.13
SNX1-201ENST00000261889 ARPP21Q9UBL0 812 aaPredicted RBP14.24□□□□□ -0.13
SNX1-201ENST00000261889 PCDHB13Q9Y5F0 798 aa14.24□□□□□ -0.13
SNX1-201ENST00000261889 ZNF804BA4D1E1 1349 aa14.24□□□□□ -0.13
SNX1-201ENST00000261889 ORC4O43929 436 aa14.24□□□□□ -0.13
SNX1-201ENST00000261889 SHBGP04278 402 aa14.24□□□□□ -0.13
SNX1-201ENST00000261889 CLEC4GQ6UXB4 293 aa14.24□□□□□ -0.13
SNX1-201ENST00000261889 OTUD6AQ7L8S5 288 aa14.24□□□□□ -0.13
SNX1-201ENST00000261889 ZNF571Q7Z3V5 609 aaPredicted RBP14.24□□□□□ -0.13
SNX1-201ENST00000261889 ZSCAN29Q8IWY8 852 aaPredicted RBP14.24□□□□□ -0.13
SNX1-201ENST00000261889 ATP6V1G3Q96LB4 118 aa14.24□□□□□ -0.13
SNX1-201ENST00000261889 MYCBPQ99417 103 aaPredicted RBP14.24□□□□□ -0.13
SNX1-201ENST00000261889 GOLGA6L10A6NI86 522 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 KRIT1O00522 736 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 SART1O43290 800 aaKnown RBP14.23□□□□□ -0.13
SNX1-201ENST00000261889 EDIL3O43854 480 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 TAX1BP1Q86VP1 789 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 CPNE8Q86YQ8 564 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 MYOCDQ8IZQ8 938 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 ADAM33Q9BZ11 813 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 EPN3Q9H201 632 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 CXorf56Q9H5V9 222 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 PNMA2Q9UL42 364 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 LRRC37AA6NMS7 1700 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 APBA3O96018 575 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 FNTAP49354 379 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 TUBB4BP68371 445 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 ADAM9Q13443 819 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 LRRC14Q15048 493 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 RPS6KA1Q15418 735 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 FAM133BQ5BKY9 247 aaKnown RBP14.23□□□□□ -0.13
SNX1-201ENST00000261889 FAM26FQ5R3K3 315 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 GBP6Q6ZN66 633 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 U2AF1L4Q8WU68 220 aaKnown RBP14.23□□□□□ -0.13
SNX1-201ENST00000261889 SPIRE2Q8WWL2 714 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 C7orf25Q9BPX7 421 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 C6orf50Q9HD87 102 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 TMOD4Q9NZQ9 345 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 NARFQ9UHQ1 456 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 ZBTB39O15060 712 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 GFPT2O94808 682 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 MYBL1P10243 752 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 POLD1P28340 1107 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 CACNB3P54284 484 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 IFFO1Q0D2I5 559 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 KRT79Q5XKE5 535 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 METTL13Q8N6R0 699 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 CABS1Q96KC9 395 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 SH2D3AQ9BRG2 576 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 OSBPL7Q9BZF2 842 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 SLC40A1Q9NP59 571 aa14.23□□□□□ -0.13
SNX1-201ENST00000261889 DDX20Q9UHI6 824 aaKnown RBP14.23□□□□□ -0.13
SNX1-201ENST00000261889 GCOM1H8Y6P7 765 aaPredicted RBP14.22□□□□□ -0.13
SNX1-201ENST00000261889 MYZAPP0CAP1 466 aa14.22□□□□□ -0.13
SNX1-201ENST00000261889 CDK8P49336 464 aa14.22□□□□□ -0.13
SNX1-201ENST00000261889 RCAN1P53805 252 aa14.22□□□□□ -0.13
SNX1-201ENST00000261889 ZNF844Q08AG5 666 aa14.22□□□□□ -0.13
SNX1-201ENST00000261889 UBE4AQ14139 1066 aa14.22□□□□□ -0.13
SNX1-201ENST00000261889 PHLDB2Q86SQ0 1253 aa14.22□□□□□ -0.13
SNX1-201ENST00000261889 DAAM2Q86T65 1068 aa14.22□□□□□ -0.13
SNX1-201ENST00000261889 GPBP1Q86WP2 473 aa14.22□□□□□ -0.13
SNX1-201ENST00000261889 CCDC25Q86WR0 208 aa14.22□□□□□ -0.13
SNX1-201ENST00000261889 INPP4AQ96PE3 977 aaPredicted RBP14.22□□□□□ -0.13
SNX1-201ENST00000261889 COL4A3BPQ9Y5P4 624 aa14.22□□□□□ -0.13
SNX1-201ENST00000261889 ARAP2Q8WZ64 1704 aa14.22□□□□□ -0.13
SNX1-201ENST00000261889 RFC4P35249 363 aa14.22□□□□□ -0.13
SNX1-201ENST00000261889 BTDP43251 543 aa14.22□□□□□ -0.13
SNX1-201ENST00000261889 AMPD3Q01432 767 aa14.22□□□□□ -0.13
SNX1-201ENST00000261889 KCNH2Q12809 1159 aa14.22□□□□□ -0.13
SNX1-201ENST00000261889 ITGB3BPQ13352 177 aaPredicted RBP14.22□□□□□ -0.13
SNX1-201ENST00000261889 ASIC2Q16515 512 aa14.22□□□□□ -0.13
SNX1-201ENST00000261889 ASTE1Q2TB18 679 aaPredicted RBP14.22□□□□□ -0.13
SNX1-201ENST00000261889 PNMA8AQ86V59 439 aaPredicted RBP14.22□□□□□ -0.13
SNX1-201ENST00000261889 SLC24A3Q9HC58 644 aa14.22□□□□□ -0.13
SNX1-201ENST00000261889 NOC2LQ9Y3T9 749 aaKnown RBP14.22□□□□□ -0.13
SNX1-201ENST00000261889 NR2F2P24468 414 aa14.22□□□□□ -0.13
SNX1-201ENST00000261889 FAM182AQ5T1J6 154 aa14.22□□□□□ -0.13
SNX1-201ENST00000261889 CCDC121Q6ZUS5 278 aa14.22□□□□□ -0.13
SNX1-201ENST00000261889 TCP11Q8WWU5 503 aa14.22□□□□□ -0.13
SNX1-201ENST00000261889 ZKSCAN4Q969J2 545 aaPredicted RBP14.22□□□□□ -0.13
SNX1-201ENST00000261889 ACP6Q9NPH0 428 aa14.22□□□□□ -0.13
SNX1-201ENST00000261889 BSDC1Q9NW68 430 aaPredicted RBP14.22□□□□□ -0.13
SNX1-201ENST00000261889 BAIAP2L1Q9UHR4 511 aa14.22□□□□□ -0.13
SNX1-201ENST00000261889 COL11A2P13942 1736 aaPredicted RBP14.21□□□□□ -0.13
SNX1-201ENST00000261889 RIMBP2O15034 1052 aa14.21□□□□□ -0.13
SNX1-201ENST00000261889 UBXN2AP68543 259 aa14.21□□□□□ -0.13
SNX1-201ENST00000261889 UNC13DQ70J99 1090 aa14.21□□□□□ -0.13
SNX1-201ENST00000261889 CPLX4Q7Z7G2 160 aa14.21□□□□□ -0.13
SNX1-201ENST00000261889 TEX11Q8IYF3 940 aa14.21□□□□□ -0.13
SNX1-201ENST00000261889 MSL3Q8N5Y2 521 aaKnown RBP14.21□□□□□ -0.13
SNX1-201ENST00000261889 USP38Q8NB14 1042 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms