RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 C11orf49Q9H6J7 331 aa13.1□□□□□ -0.31
PFDN1-201ENST00000261813 MLXIPQ9HAP2 919 aa13.1□□□□□ -0.31
PFDN1-201ENST00000261813 NR2E3Q9Y5X4 410 aa13.1□□□□□ -0.31
PFDN1-201ENST00000261813 MOXD2PA6NHM9 499 aa13.09□□□□□ -0.31
PFDN1-201ENST00000261813 MSH4O15457 936 aa13.09□□□□□ -0.31
PFDN1-201ENST00000261813 SLC37A4O43826 429 aa13.09□□□□□ -0.31
PFDN1-201ENST00000261813 PPP4R3AQ6IN85 833 aa13.09□□□□□ -0.31
PFDN1-201ENST00000261813 NECAB2Q7Z6G3 386 aa13.09□□□□□ -0.31
PFDN1-201ENST00000261813 NOSTRINQ8IVI9 506 aa13.09□□□□□ -0.31
PFDN1-201ENST00000261813 PCSK9Q8NBP7 692 aaKnown RBP13.09□□□□□ -0.31
PFDN1-201ENST00000261813 PPTC7Q8NI37 304 aa13.09□□□□□ -0.31
PFDN1-201ENST00000261813 TNPO1Q92973 898 aaKnown RBP13.09□□□□□ -0.31
PFDN1-201ENST00000261813 FERMT2Q96AC1 680 aa13.09□□□□□ -0.31
PFDN1-201ENST00000261813 SPATA33Q96N06 139 aa13.09□□□□□ -0.31
PFDN1-201ENST00000261813 DDX25Q9UHL0 483 aaKnown RBP13.09□□□□□ -0.31
PFDN1-201ENST00000261813 ZDHHC9Q9Y397 364 aa13.09□□□□□ -0.31
PFDN1-201ENST00000261813 DOCK5Q9H7D0 1870 aa13.09□□□□□ -0.31
PFDN1-201ENST00000261813 NFASCO94856 1347 aa13.09□□□□□ -0.31
PFDN1-201ENST00000261813 A0A1W2PQ45 241 aaPredicted RBP13.08□□□□□ -0.31
PFDN1-201ENST00000261813 A0A1W2PQY0 241 aa13.08□□□□□ -0.31
PFDN1-201ENST00000261813 IPO5O00410 1097 aaKnown RBP13.08□□□□□ -0.31
PFDN1-201ENST00000261813 DHX15O43143 795 aaKnown RBP13.08□□□□□ -0.31
PFDN1-201ENST00000261813 CCNT1O60563 726 aaKnown RBP13.08□□□□□ -0.31
PFDN1-201ENST00000261813 HOXD8P13378 290 aaPredicted RBP13.08□□□□□ -0.31
PFDN1-201ENST00000261813 PRSS12P56730 875 aa13.08□□□□□ -0.31
PFDN1-201ENST00000261813 SP4Q02446 784 aa13.08□□□□□ -0.31
PFDN1-201ENST00000261813 PKP1Q13835 747 aa13.08□□□□□ -0.31
PFDN1-201ENST00000261813 CXCL17Q6UXB2 119 aa13.08□□□□□ -0.31
PFDN1-201ENST00000261813 GIMAP8Q8ND71 665 aaPredicted RBP13.08□□□□□ -0.31
PFDN1-201ENST00000261813 GJA10Q969M2 543 aa13.08□□□□□ -0.31
PFDN1-201ENST00000261813 ZNF396Q96N95 335 aaPredicted RBP13.08□□□□□ -0.31
PFDN1-201ENST00000261813 GPR20Q99678 358 aa13.08□□□□□ -0.31
PFDN1-201ENST00000261813 ZNF577Q9BSK1 485 aa13.08□□□□□ -0.31
PFDN1-201ENST00000261813 SENP6Q9GZR1 1112 aaPredicted RBP13.08□□□□□ -0.31
PFDN1-201ENST00000261813 CFAP45Q9UL16 551 aa13.08□□□□□ -0.31
PFDN1-201ENST00000261813 DDX39AO00148 427 aaKnown RBP13.07□□□□□ -0.32
PFDN1-201ENST00000261813 ZEB2O60315 1214 aa13.07□□□□□ -0.32
PFDN1-201ENST00000261813 MYL3P08590 195 aa13.07□□□□□ -0.32
PFDN1-201ENST00000261813 GCFC2P16383 781 aaKnown RBP13.07□□□□□ -0.32
PFDN1-201ENST00000261813 PURAQ00577 322 aaKnown RBP13.07□□□□□ -0.32
PFDN1-201ENST00000261813 BRDTQ58F21 947 aaPredicted RBP13.07□□□□□ -0.32
PFDN1-201ENST00000261813 ETNPPLQ8TBG4 499 aa13.07□□□□□ -0.32
PFDN1-201ENST00000261813 SLC5A5Q92911 643 aa13.07□□□□□ -0.32
PFDN1-201ENST00000261813 NAP1L4Q99733 375 aaKnown RBP13.07□□□□□ -0.32
PFDN1-201ENST00000261813 SDF4Q9BRK5 362 aa13.07□□□□□ -0.32
PFDN1-201ENST00000261813 JPH1Q9HDC5 661 aaPredicted RBP13.07□□□□□ -0.32
PFDN1-201ENST00000261813 POLR3EQ9NVU0 708 aa13.07□□□□□ -0.32
PFDN1-201ENST00000261813 KIAA1468Q9P260 1216 aa13.07□□□□□ -0.32
PFDN1-201ENST00000261813 GSTTP1A0A1W2PQM5 241 aa13.07□□□□□ -0.32
PFDN1-201ENST00000261813 NOP56O00567 594 aaKnown RBP13.07□□□□□ -0.32
PFDN1-201ENST00000261813 CCNE2O96020 404 aa13.07□□□□□ -0.32
PFDN1-201ENST00000261813 ATP2B1P20020 1258 aa13.07□□□□□ -0.32
PFDN1-201ENST00000261813 TOB1P50616 345 aaPredicted RBP13.07□□□□□ -0.32
PFDN1-201ENST00000261813 KRT85P78386 507 aa13.07□□□□□ -0.32
PFDN1-201ENST00000261813 DGKDQ16760 1214 aa13.07□□□□□ -0.32
PFDN1-201ENST00000261813 SMYD5Q6GMV2 418 aa13.07□□□□□ -0.32
PFDN1-201ENST00000261813 TTC13Q8NBP0 860 aa13.07□□□□□ -0.32
PFDN1-201ENST00000261813 KAT2BQ92831 832 aa13.07□□□□□ -0.32
PFDN1-201ENST00000261813 GLT1D1Q96MS3 346 aa13.07□□□□□ -0.32
PFDN1-201ENST00000261813 KCNMB3Q9NPA1 279 aa13.07□□□□□ -0.32
PFDN1-201ENST00000261813 STARD7Q9NQZ5 370 aa13.07□□□□□ -0.32
PFDN1-201ENST00000261813 SLC9A2Q9UBY0 812 aa13.07□□□□□ -0.32
PFDN1-201ENST00000261813 CEP290O15078 2479 aa13.06□□□□□ -0.32
PFDN1-201ENST00000261813 KPNA6O60684 536 aa13.06□□□□□ -0.32
PFDN1-201ENST00000261813 PSMD10O75832 226 aa13.06□□□□□ -0.32
PFDN1-201ENST00000261813 ZNF286BP0CG31 522 aa13.06□□□□□ -0.32
PFDN1-201ENST00000261813 TRAPPC10P48553 1259 aa13.06□□□□□ -0.32
PFDN1-201ENST00000261813 PSMC6P62333 389 aa13.06□□□□□ -0.32
PFDN1-201ENST00000261813 RESTQ13127 1097 aa13.06□□□□□ -0.32
PFDN1-201ENST00000261813 SNX17Q15036 470 aa13.06□□□□□ -0.32
PFDN1-201ENST00000261813 LRRC26Q2I0M4 334 aa13.06□□□□□ -0.32
PFDN1-201ENST00000261813 TTC38Q5R3I4 469 aa13.06□□□□□ -0.32
PFDN1-201ENST00000261813 SLC39A5Q6ZMH5 540 aa13.06□□□□□ -0.32
PFDN1-201ENST00000261813 FERMT3Q86UX7 667 aa13.06□□□□□ -0.32
PFDN1-201ENST00000261813 LAPTM4BQ86VI4 370 aa13.06□□□□□ -0.32
PFDN1-201ENST00000261813 SEPT1Q8WYJ6 367 aa13.06□□□□□ -0.32
PFDN1-201ENST00000261813 HAS1Q92839 578 aa13.06□□□□□ -0.32
PFDN1-201ENST00000261813 RIT2Q99578 217 aa13.06□□□□□ -0.32
PFDN1-201ENST00000261813 C16orf70Q9BSU1 422 aa13.06□□□□□ -0.32
PFDN1-201ENST00000261813 MTG1Q9BT17 334 aaPredicted RBP13.06□□□□□ -0.32
PFDN1-201ENST00000261813 SCAND2PQ9GZW5 306 aaPredicted RBP13.06□□□□□ -0.32
PFDN1-201ENST00000261813 TBC1D22BQ9NU19 505 aa13.06□□□□□ -0.32
PFDN1-201ENST00000261813 NOL7Q9UMY1 257 aaKnown RBP13.06□□□□□ -0.32
PFDN1-201ENST00000261813 GRIN2DO15399 1336 aa13.05□□□□□ -0.32
PFDN1-201ENST00000261813 ELP1O95163 1332 aa13.05□□□□□ -0.32
PFDN1-201ENST00000261813 TRIOBPQ9H2D6 2365 aa13.05□□□□□ -0.32
PFDN1-201ENST00000261813 DDX11L8A8MPP1 907 aa13.05□□□□□ -0.32
PFDN1-201ENST00000261813 NEMFO60524 1076 aa13.05□□□□□ -0.32
PFDN1-201ENST00000261813 PPFIA4O75335 1185 aa13.05□□□□□ -0.32
PFDN1-201ENST00000261813 CABYRO75952 493 aa13.05□□□□□ -0.32
PFDN1-201ENST00000261813 BAG4O95429 457 aaKnown RBP13.05□□□□□ -0.32
PFDN1-201ENST00000261813 F2P00734 622 aa13.05□□□□□ -0.32
PFDN1-201ENST00000261813 LGALS2P05162 132 aa13.05□□□□□ -0.32
PFDN1-201ENST00000261813 MCM7P33993 719 aa13.05□□□□□ -0.32
PFDN1-201ENST00000261813 TCF7P36402 384 aaPredicted RBP13.05□□□□□ -0.32
PFDN1-201ENST00000261813 ACTR2P61160 394 aa13.05□□□□□ -0.32
PFDN1-201ENST00000261813 ZNF174Q15697 407 aa13.05□□□□□ -0.32
PFDN1-201ENST00000261813 RILPL1Q5EBL4 403 aa13.05□□□□□ -0.32
PFDN1-201ENST00000261813 LRCH2Q5VUJ6 765 aa13.05□□□□□ -0.32
PFDN1-201ENST00000261813 FOXD4L5Q5VV16 416 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms