RNA–Protein interactions for RNA: ENST00000261448.5

CASQ2-201, Transcript of calsequestrin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASQ2, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2-201ENST00000261448 CEP63Q96MT8 703 aa13.1□□□□□ -0.31
CASQ2-201ENST00000261448 AS3MTQ9HBK9 375 aa13.1□□□□□ -0.31
CASQ2-201ENST00000261448 PKD2L1Q9P0L9 805 aa13.1□□□□□ -0.31
CASQ2-201ENST00000261448 REXO2Q9Y3B8 237 aaKnown RBP13.1□□□□□ -0.31
CASQ2-201ENST00000261448 A0A1W2PQJ5 194 aa13.09□□□□□ -0.31
CASQ2-201ENST00000261448 DDX39AO00148 427 aaKnown RBP13.09□□□□□ -0.31
CASQ2-201ENST00000261448 MARSP56192 900 aaKnown RBP13.09□□□□□ -0.31
CASQ2-201ENST00000261448 ZBED6P86452 979 aa13.09□□□□□ -0.31
CASQ2-201ENST00000261448 ITGB3BPQ13352 177 aaPredicted RBP13.09□□□□□ -0.31
CASQ2-201ENST00000261448 DLK2Q6UY11 383 aa13.09□□□□□ -0.31
CASQ2-201ENST00000261448 NIPA1Q7RTP0 329 aa13.09□□□□□ -0.31
CASQ2-201ENST00000261448 LRRN4CLQ8ND94 238 aa13.09□□□□□ -0.31
CASQ2-201ENST00000261448 REPS2Q8NFH8 660 aa13.09□□□□□ -0.31
CASQ2-201ENST00000261448 ANKRD7Q92527 254 aa13.09□□□□□ -0.31
CASQ2-201ENST00000261448 PCMTD1Q96MG8 357 aaPredicted RBP13.09□□□□□ -0.31
CASQ2-201ENST00000261448 EPN1Q9Y6I3 576 aaPredicted RBP13.09□□□□□ -0.31
CASQ2-201ENST00000261448 SRCAPQ6ZRS2 3230 aa13.09□□□□□ -0.31
CASQ2-201ENST00000261448 PARP14Q460N5 1801 aa13.09□□□□□ -0.31
CASQ2-201ENST00000261448 PRPF6O94906 941 aaKnown RBP13.09□□□□□ -0.31
CASQ2-201ENST00000261448 KIF20AO95235 890 aa13.09□□□□□ -0.31
CASQ2-201ENST00000261448 NDUFA10O95299 355 aa13.09□□□□□ -0.31
CASQ2-201ENST00000261448 EIF2AK2P19525 551 aaKnown RBP13.09□□□□□ -0.31
CASQ2-201ENST00000261448 MUTP22033 750 aa13.09□□□□□ -0.31
CASQ2-201ENST00000261448 ADAM9Q13443 819 aa13.09□□□□□ -0.31
CASQ2-201ENST00000261448 PGM5Q15124 567 aa13.09□□□□□ -0.31
CASQ2-201ENST00000261448 KNOP1Q1ED39 458 aaKnown RBP13.09□□□□□ -0.31
CASQ2-201ENST00000261448 EDRF1Q3B7T1 1238 aa13.09□□□□□ -0.31
CASQ2-201ENST00000261448 BANK1Q8NDB2 785 aa13.09□□□□□ -0.31
CASQ2-201ENST00000261448 C12orf42Q96LP6 360 aa13.09□□□□□ -0.31
CASQ2-201ENST00000261448 AGO4Q9HCK5 861 aaKnown RBP13.09□□□□□ -0.31
CASQ2-201ENST00000261448 JADE2Q9NQC1 790 aa13.09□□□□□ -0.31
CASQ2-201ENST00000261448 ADAMTS5Q9UNA0 930 aa13.09□□□□□ -0.31
CASQ2-201ENST00000261448 TRAF3IP3Q9Y228 551 aa13.09□□□□□ -0.31
CASQ2-201ENST00000261448 SLU7O95391 586 aaKnown RBP13.08□□□□□ -0.31
CASQ2-201ENST00000261448 ARHGAP25P42331 645 aa13.08□□□□□ -0.31
CASQ2-201ENST00000261448 KCNA1Q09470 495 aa13.08□□□□□ -0.31
CASQ2-201ENST00000261448 KCNMA1Q12791 1236 aa13.08□□□□□ -0.31
CASQ2-201ENST00000261448 TRIM59Q8IWR1 403 aa13.08□□□□□ -0.31
CASQ2-201ENST00000261448 SAMD3Q8N6K7 520 aa13.08□□□□□ -0.31
CASQ2-201ENST00000261448 NACC1Q96RE7 527 aa13.08□□□□□ -0.31
CASQ2-201ENST00000261448 LXNQ9BS40 222 aa13.08□□□□□ -0.31
CASQ2-201ENST00000261448 OLFML3Q9NRN5 406 aa13.08□□□□□ -0.31
CASQ2-201ENST00000261448 FAM207AQ9NSI2 230 aaPredicted RBP13.08□□□□□ -0.31
CASQ2-201ENST00000261448 RLFQ13129 1914 aa13.08□□□□□ -0.32
CASQ2-201ENST00000261448 FDX1P10109 184 aa13.08□□□□□ -0.32
CASQ2-201ENST00000261448 BMT2Q1RMZ1 405 aa13.08□□□□□ -0.32
CASQ2-201ENST00000261448 CCDC40Q4G0X9 1142 aa13.08□□□□□ -0.32
CASQ2-201ENST00000261448 PPP4R3CPQ6ZMV5 832 aa13.08□□□□□ -0.32
CASQ2-201ENST00000261448 RNF207Q6ZRF8 634 aa13.08□□□□□ -0.32
CASQ2-201ENST00000261448 CTDP1Q9Y5B0 961 aaPredicted RBP13.08□□□□□ -0.32
CASQ2-201ENST00000261448 PHIPQ8WWQ0 1821 aa13.08□□□□□ -0.32
CASQ2-201ENST00000261448 C19orf81C9J6K1 198 aa13.07□□□□□ -0.32
CASQ2-201ENST00000261448 TBCAO75347 108 aaKnown RBP13.07□□□□□ -0.32
CASQ2-201ENST00000261448 URI1O94763 535 aaPredicted RBP13.07□□□□□ -0.32
CASQ2-201ENST00000261448 DDNO94850 711 aaPredicted RBP13.07□□□□□ -0.32
CASQ2-201ENST00000261448 GNA14O95837 355 aa13.07□□□□□ -0.32
CASQ2-201ENST00000261448 CASQ1P31415 396 aa13.07□□□□□ -0.32
CASQ2-201ENST00000261448 DSG3P32926 999 aa13.07□□□□□ -0.32
CASQ2-201ENST00000261448 MTMR1Q13613 665 aa13.07□□□□□ -0.32
CASQ2-201ENST00000261448 PRKG1Q13976 671 aa13.07□□□□□ -0.32
CASQ2-201ENST00000261448 NSMFQ6X4W1 530 aa13.07□□□□□ -0.32
CASQ2-201ENST00000261448 SMCR8Q8TEV9 937 aaPredicted RBP13.07□□□□□ -0.32
CASQ2-201ENST00000261448 ERO1AQ96HE7 468 aa13.07□□□□□ -0.32
CASQ2-201ENST00000261448 FIZ1Q96SL8 496 aa13.07□□□□□ -0.32
CASQ2-201ENST00000261448 RMDN3Q96TC7 470 aa13.07□□□□□ -0.32
CASQ2-201ENST00000261448 PDCD2LQ9BRP1 358 aa13.07□□□□□ -0.32
CASQ2-201ENST00000261448 MMRN2Q9H8L6 949 aa13.07□□□□□ -0.32
CASQ2-201ENST00000261448 PXMP2Q9NR77 195 aa13.07□□□□□ -0.32
CASQ2-201ENST00000261448 ZNF214Q9UL59 606 aaPredicted RBP13.07□□□□□ -0.32
CASQ2-201ENST00000261448 AFG3L2Q9Y4W6 797 aa13.07□□□□□ -0.32
CASQ2-201ENST00000261448 PPP2R3BQ9Y5P8 575 aa13.07□□□□□ -0.32
CASQ2-201ENST00000261448 USP2O75604 605 aaPredicted RBP13.07□□□□□ -0.32
CASQ2-201ENST00000261448 NR2F2P24468 414 aa13.07□□□□□ -0.32
CASQ2-201ENST00000261448 BAATQ14032 418 aaPredicted RBP13.07□□□□□ -0.32
CASQ2-201ENST00000261448 TSR1Q2NL82 804 aaKnown RBP13.07□□□□□ -0.32
CASQ2-201ENST00000261448 RNF146Q9NTX7 359 aa13.07□□□□□ -0.32
CASQ2-201ENST00000261448 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.07□□□□□ -0.32
CASQ2-201ENST00000261448 V9GYY5 206 aaPredicted RBP13.07□□□□□ -0.32
CASQ2-201ENST00000261448 PDXKO00764 312 aa13.06□□□□□ -0.32
CASQ2-201ENST00000261448 ATP9AO75110 1047 aa13.06□□□□□ -0.32
CASQ2-201ENST00000261448 GCNT3O95395 438 aa13.06□□□□□ -0.32
CASQ2-201ENST00000261448 MYCLP12524 364 aaPredicted RBP13.06□□□□□ -0.32
CASQ2-201ENST00000261448 GAP43P17677 238 aa13.06□□□□□ -0.32
CASQ2-201ENST00000261448 NMT1P30419 496 aaKnown RBP13.06□□□□□ -0.32
CASQ2-201ENST00000261448 HNRNPH3P31942 346 aaKnown RBP13.06□□□□□ -0.32
CASQ2-201ENST00000261448 ZNF131P52739 623 aa13.06□□□□□ -0.32
CASQ2-201ENST00000261448 COG2Q14746 738 aa13.06□□□□□ -0.32
CASQ2-201ENST00000261448 TMEM132BQ14DG7 1078 aa13.06□□□□□ -0.32
CASQ2-201ENST00000261448 NOL9Q5SY16 702 aaKnown RBP13.06□□□□□ -0.32
CASQ2-201ENST00000261448 MIER3Q7Z3K6 550 aa13.06□□□□□ -0.32
CASQ2-201ENST00000261448 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.06□□□□□ -0.32
CASQ2-201ENST00000261448 IKZF4Q9H2S9 585 aa13.06□□□□□ -0.32
CASQ2-201ENST00000261448 NHEJ1Q9H9Q4 299 aaPredicted RBP13.06□□□□□ -0.32
CASQ2-201ENST00000261448 PNMA2Q9UL42 364 aa13.06□□□□□ -0.32
CASQ2-201ENST00000261448 PLAGL2Q9UPG8 496 aa13.06□□□□□ -0.32
CASQ2-201ENST00000261448 ASTN1O14525 1302 aa13.06□□□□□ -0.32
CASQ2-201ENST00000261448 DICER1Q9UPY3 1922 aaKnown RBP13.06□□□□□ -0.32
CASQ2-201ENST00000261448 HERVK_113P62684 666 aa13.06□□□□□ -0.32
CASQ2-201ENST00000261448 MAP3K9P80192 1104 aa13.06□□□□□ -0.32
CASQ2-201ENST00000261448 SNRNP48Q6IEG0 339 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms