RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 MTA1Q13330 715 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 LAMB3Q13751 1172 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 TTC31Q49AM3 519 aaPredicted RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 TNNI3KQ59H18 835 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 TTC38Q5R3I4 469 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 SNX30Q5VWJ9 437 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 PRAMEF18Q5VWM3 479 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 CCDC149Q6ZUS6 474 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 CHMP1BQ7LBR1 199 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 CCDC84Q86UT8 332 aaPredicted RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 MRPS27Q92552 414 aaKnown RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 HDAC11Q96DB2 347 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 RNPC3Q96LT9 517 aaKnown RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 MKNK1Q9BUB5 465 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 EPC1Q9H2F5 836 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 IGFLR1Q9H665 355 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 EXO5Q9H790 373 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 ZSWIM6Q9HCJ5 1215 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 GGT7Q9UJ14 662 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 MID2Q9UJV3 735 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 USTQ9Y2C2 406 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 COL17A1Q9UMD9 1497 aaPredicted RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 KDRP35968 1356 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 KIF24Q5T7B8 1368 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 SYNJ2BP-COX16A0A087WUM0 186 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 GRXCR2A6NFK2 248 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 ADCY3O60266 1144 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 PRDM1O75626 825 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 KLRC2P26717 231 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 AP3B2Q13367 1082 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 TRIM14Q14142 442 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 SUZ12Q15022 739 aaKnown RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 TMEM164Q5U3C3 297 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 BSPRYQ5W0U4 402 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 RSBN1LQ6PCB5 846 aaPredicted RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 NEK8Q86SG6 692 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 ERICH1Q86X53 443 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 TFB1MQ8WVM0 346 aaKnown RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 POP1Q99575 1024 aaKnown RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 NLNQ9BYT8 704 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 GIMAP4Q9NUV9 329 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 NKIRAS1Q9NYS0 192 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 COX16Q9P0S2 106 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 MAGED2Q9UNF1 606 aaPredicted RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 PA2G4Q9UQ80 394 aaKnown RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 RBM8AQ9Y5S9 174 aaKnown RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 ARAP3Q8WWN8 1544 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 USP6P35125 1406 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 ZNF532Q9HCE3 1301 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 ATP10BO94823 1461 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 KDM5DQ9BY66 1539 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 CCDC189A1A4V9 331 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 ERICH4A6NGS2 130 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 H3BUI4 141 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 STRNO43815 780 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 PQBP1O60828 265 aaKnown RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 ENTPD3O75355 529 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 GGPS1O95749 300 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 PYGMP11217 842 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 ABCB4P21439 1286 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 NSFP46459 744 aaKnown RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 EFNA5P52803 228 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 MFAP3P55082 362 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 HDAC4P56524 1084 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 FSTL1Q12841 308 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 MYSM1Q5VVJ2 828 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 LRRC69Q6ZNQ3 347 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 MTERF4Q7Z6M4 381 aaKnown RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 CABP7Q86V35 215 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 GPC2Q8N158 579 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 FIBCD1Q8N539 461 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 RNF214Q8ND24 703 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 SPATA18Q8TC71 538 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 CCDC124Q96CT7 223 aaKnown RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 OSBPL5Q9H0X9 879 aaPredicted RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 ZNF302Q9NR11 478 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 STK17AQ9UEE5 414 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 SRP68Q9UHB9 627 aaKnown RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 PLA2G4CQ9UP65 541 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 MRFAP1Q9Y605 127 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 UBN2Q6ZU65 1347 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 ADCY9O60503 1353 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 B4E1Z4 1266 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 UBE2Q2LH0YL09 131 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 CXCL11O14625 94 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 MGEA5O60502 916 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 MPOP05164 745 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 APOA4P06727 396 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 DLATP10515 647 aaKnown RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 ALPPL2P10696 532 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 XRCC5P13010 732 aaKnown RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 AKR1A1P14550 325 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 GNSP15586 552 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 EIF2AK2P19525 551 aaKnown RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 MARK3P27448 753 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 DCAF4L1Q3SXM0 396 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 TMEM259Q4ZIN3 620 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 ATAT1Q5SQI0 421 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 ANKRD23Q86SG2 305 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 GPBP1Q86WP2 473 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms