RNA–Protein interactions for RNA: ENST00000258243.6

URB2-201, Transcript of URB2 ribosome biogenesis 2 homolog (S. cerevisiae), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene URB2, Length 5,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB2-201ENST00000258243 C11orf57Q6ZUT1 292 aaPredicted RBP11.79□□□□□ -0.52
URB2-201ENST00000258243 PEX26Q7Z412 305 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 DENND3A2RUS2 1198 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 PSMD14O00487 310 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 DCCP43146 1447 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 PSMD7P51665 324 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 PTK2Q05397 1052 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 TERF2Q15554 542 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 PPP1R18Q6NYC8 613 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 BCAS4Q8TDM0 211 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 CCDC51Q96ER9 411 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 PDLIM2Q96JY6 352 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 FANCLQ9NW38 375 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 PPP1R9AQ9ULJ8 1098 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 OPHN1O60890 802 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 CELF2O95319 508 aaKnown RBP11.79□□□□□ -0.52
URB2-201ENST00000258243 CLCN6P51797 869 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 HMGCS2P54868 508 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 ALCAMQ13740 583 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 ZKSCAN8Q15776 578 aaPredicted RBP11.79□□□□□ -0.52
URB2-201ENST00000258243 DSTYKQ6XUX3 929 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 GTF3C2Q8WUA4 911 aaPredicted RBP11.79□□□□□ -0.52
URB2-201ENST00000258243 FAM81BQ96LP2 452 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 SLC12A6Q9UHW9 1150 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 TSKSQ9UJT2 592 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 ZNF233A6NK53 670 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 TMED1Q13445 227 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 CASC4Q6P4E1 433 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 NSUN7Q8NE18 718 aaKnown RBP11.79□□□□□ -0.52
URB2-201ENST00000258243 URGCPQ8TCY9 931 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 ASIC3Q9UHC3 531 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 NDUFA8P51970 172 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 TAOK1Q7L7X3 1001 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 HAUS1Q96CS2 278 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 CEP95Q96GE4 821 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 TBC1D22BQ9NU19 505 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 USP42Q9H9J4 1324 aaKnown RBP11.78□□□□□ -0.52
URB2-201ENST00000258243 SYNJ2BP-COX16A0A087WUM0 186 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 HUNKP57058 714 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 LONRF2Q1L5Z9 754 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 PARVGQ9HBI0 331 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 COX16Q9P0S2 106 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 ZNF70Q9UC06 446 aaPredicted RBP11.78□□□□□ -0.52
URB2-201ENST00000258243 C19orf81C9J6K1 198 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 GIPC1O14908 333 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 ZNF131P52739 623 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 RPS6KA1Q15418 735 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 SRGAP1Q7Z6B7 1085 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 SDCCAG8Q86SQ7 713 aaPredicted RBP11.78□□□□□ -0.52
URB2-201ENST00000258243 KLHL7Q8IXQ5 586 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 ARHGEF2Q92974 986 aaKnown RBP11.78□□□□□ -0.52
URB2-201ENST00000258243 CAPS2Q9BXY5 557 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 ATP6V0A4Q9HBG4 840 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 KBTBD13C9JR72 458 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 HMGB3O15347 200 aaKnown RBP11.78□□□□□ -0.52
URB2-201ENST00000258243 XPAP23025 273 aaPredicted RBP11.78□□□□□ -0.52
URB2-201ENST00000258243 NSFP46459 744 aaKnown RBP11.78□□□□□ -0.52
URB2-201ENST00000258243 OSTNP61366 133 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 CTTNQ14247 550 aaKnown RBP11.78□□□□□ -0.52
URB2-201ENST00000258243 RSAD2Q8WXG1 361 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 NOC2LQ9Y3T9 749 aaKnown RBP11.78□□□□□ -0.52
URB2-201ENST00000258243 F5H6K3 240 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 KLRC3Q07444 240 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 MTMR2Q13614 643 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 SLFN12LQ6IEE8 588 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 TMTC3Q6ZXV5 915 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 ELMOD1Q8N336 334 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 BBS5Q8N3I7 341 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 CCDC68Q9H2F9 335 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 KIF9Q9HAQ2 790 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 NKIRAS1Q9NYS0 192 aa11.78□□□□□ -0.52
URB2-201ENST00000258243 PLEKHA8P1O95397 391 aa11.77□□□□□ -0.52
URB2-201ENST00000258243 NR2F2P24468 414 aa11.77□□□□□ -0.52
URB2-201ENST00000258243 PHKA2P46019 1235 aa11.77□□□□□ -0.52
URB2-201ENST00000258243 EXOC3L4Q17RC7 722 aa11.77□□□□□ -0.52
URB2-201ENST00000258243 CCDC62Q6P9F0 684 aa11.77□□□□□ -0.52
URB2-201ENST00000258243 SPDL1Q96EA4 605 aa11.77□□□□□ -0.52
URB2-201ENST00000258243 PRDM5Q9NQX1 630 aaPredicted RBP11.77□□□□□ -0.52
URB2-201ENST00000258243 BAIAP2L1Q9UHR4 511 aa11.77□□□□□ -0.52
URB2-201ENST00000258243 FBXO2Q9UK22 296 aaPredicted RBP11.77□□□□□ -0.52
URB2-201ENST00000258243 AMFRQ9UKV5 643 aa11.77□□□□□ -0.52
URB2-201ENST00000258243 A6NJR5 290 aa11.77□□□□□ -0.53
URB2-201ENST00000258243 ABCB4P21439 1286 aa11.77□□□□□ -0.53
URB2-201ENST00000258243 HNRNPH2P55795 449 aaKnown RBP11.77□□□□□ -0.53
URB2-201ENST00000258243 TGFB2P61812 414 aa11.77□□□□□ -0.53
URB2-201ENST00000258243 KRT76Q01546 638 aa11.77□□□□□ -0.53
URB2-201ENST00000258243 CACNB1Q02641 598 aaPredicted RBP11.77□□□□□ -0.53
URB2-201ENST00000258243 SLC39A14Q15043 492 aa11.77□□□□□ -0.53
URB2-201ENST00000258243 CFAP221Q4G0U5 840 aa11.77□□□□□ -0.53
URB2-201ENST00000258243 FAM186BQ8IYM0 893 aa11.77□□□□□ -0.53
URB2-201ENST00000258243 SLC44A5Q8NCS7 719 aa11.77□□□□□ -0.53
URB2-201ENST00000258243 ZNF302Q9NR11 478 aa11.77□□□□□ -0.53
URB2-201ENST00000258243 PAIP2BQ9ULR5 123 aaKnown RBP11.77□□□□□ -0.53
URB2-201ENST00000258243 SPDYE16A6NNV3 312 aaPredicted RBP11.77□□□□□ -0.53
URB2-201ENST00000258243 WDR64B1ANS9 1081 aa11.77□□□□□ -0.53
URB2-201ENST00000258243 PPP1R12AO14974 1030 aaPredicted RBP11.77□□□□□ -0.53
URB2-201ENST00000258243 ENTPD3O75355 529 aa11.77□□□□□ -0.53
URB2-201ENST00000258243 PLA2G4BP0C869 781 aa11.77□□□□□ -0.53
URB2-201ENST00000258243 POLR2FP61218 127 aaKnown RBP11.77□□□□□ -0.53
URB2-201ENST00000258243 SPDYE2Q495Y8 402 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms