RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 SCFD1Q8WVM8 642 aa18.6■□□□□ 0.57
CDK4-201ENST00000257904 GJA10Q969M2 543 aa18.6■□□□□ 0.57
CDK4-201ENST00000257904 PLCB1Q9NQ66 1216 aa18.6■□□□□ 0.57
CDK4-201ENST00000257904 ECHS1P30084 290 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 EPS15P42566 896 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 CLK2P49760 499 aaKnown RBP18.59■□□□□ 0.57
CDK4-201ENST00000257904 ERVK-9P63128 1117 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 GPSM2P81274 684 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 DDR1Q08345 913 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 CEP85LQ5SZL2 805 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 C10orf76Q5T2E6 689 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 MICALCLQ6ZW33 695 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 MAATS1Q7Z4T9 603 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 YTHDF3Q7Z739 585 aaKnown RBP18.59■□□□□ 0.57
CDK4-201ENST00000257904 PRPF38AQ8NAV1 312 aaKnown RBP18.59■□□□□ 0.57
CDK4-201ENST00000257904 RBM17Q96I25 401 aaKnown RBP18.59■□□□□ 0.57
CDK4-201ENST00000257904 CEP89Q96ST8 783 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 TMBIM4Q9HC24 238 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 CAPN7Q9Y6W3 813 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 PLIN4Q96Q06 1357 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 SRRM3A6NNA2 597 aaPredicted RBP18.59■□□□□ 0.57
CDK4-201ENST00000257904 POLRMTO00411 1230 aaKnown RBP18.59■□□□□ 0.57
CDK4-201ENST00000257904 FSBPO95073 299 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 KIF4AO95239 1232 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 SNHG28P0DPA3 235 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 PLCG2P16885 1265 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 FNTAP49354 379 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 USP11P51784 963 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 RHBDL3P58872 404 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 ADAM9Q13443 819 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 CUL1Q13616 776 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 SWT1Q5T5J6 900 aaKnown RBP18.59■□□□□ 0.57
CDK4-201ENST00000257904 LRIG3Q6UXM1 1119 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 NLRP14Q86W24 1093 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 LRRC47Q8N1G4 583 aaKnown RBP18.59■□□□□ 0.57
CDK4-201ENST00000257904 SCFD2Q8WU76 684 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 MTMR4Q9NYA4 1195 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 PCDHA12Q9UN75 941 aa18.59■□□□□ 0.57
CDK4-201ENST00000257904 E9PMD0 336 aa18.58■□□□□ 0.57
CDK4-201ENST00000257904 MARCH6O60337 910 aa18.58■□□□□ 0.57
CDK4-201ENST00000257904 PTK2Q05397 1052 aa18.58■□□□□ 0.57
CDK4-201ENST00000257904 KCNH2Q12809 1159 aa18.58■□□□□ 0.57
CDK4-201ENST00000257904 HLTFQ14527 1009 aaKnown RBP eCLIP18.58■□□□□ 0.57
CDK4-201ENST00000257904 HERC4Q5GLZ8 1057 aaPredicted RBP18.58■□□□□ 0.57
CDK4-201ENST00000257904 MYCBPAPQ8TBZ2 947 aa18.58■□□□□ 0.57
CDK4-201ENST00000257904 ACTRT1Q8TDG2 376 aa18.58■□□□□ 0.57
CDK4-201ENST00000257904 PBKQ96KB5 322 aa18.58■□□□□ 0.57
CDK4-201ENST00000257904 CCT8L2Q96SF2 557 aa18.58■□□□□ 0.57
CDK4-201ENST00000257904 EMILIN3Q9NT22 766 aa18.58■□□□□ 0.57
CDK4-201ENST00000257904 PNMA6FA0A0J9YX94 578 aa18.58■□□□□ 0.56
CDK4-201ENST00000257904 NPHP3-ACAD11A0A0J9YXS1 232 aa18.58■□□□□ 0.56
CDK4-201ENST00000257904 GOLGA6L10A6NI86 522 aa18.58■□□□□ 0.56
CDK4-201ENST00000257904 PLA2G4BP0C869 781 aa18.58■□□□□ 0.56
CDK4-201ENST00000257904 GCFC2P16383 781 aaKnown RBP18.58■□□□□ 0.56
CDK4-201ENST00000257904 HSD17B3P37058 310 aa18.58■□□□□ 0.56
CDK4-201ENST00000257904 USP8P40818 1118 aa18.58■□□□□ 0.56
CDK4-201ENST00000257904 SEC24CP53992 1094 aa18.58■□□□□ 0.56
CDK4-201ENST00000257904 EDRF1Q3B7T1 1238 aa18.58■□□□□ 0.56
CDK4-201ENST00000257904 PPP4R3CPQ6ZMV5 832 aa18.58■□□□□ 0.56
CDK4-201ENST00000257904 ZNF571Q7Z3V5 609 aaPredicted RBP18.58■□□□□ 0.56
CDK4-201ENST00000257904 IRF2BP2Q7Z5L9 587 aa18.58■□□□□ 0.56
CDK4-201ENST00000257904 COL23A1Q86Y22 540 aaPredicted RBP18.58■□□□□ 0.56
CDK4-201ENST00000257904 LRRC57Q8N9N7 239 aa18.58■□□□□ 0.56
CDK4-201ENST00000257904 JMJD4Q9H9V9 463 aa18.58■□□□□ 0.56
CDK4-201ENST00000257904 GPCPD1Q9NPB8 672 aa18.58■□□□□ 0.56
CDK4-201ENST00000257904 KIAA1024Q9UPX6 916 aa18.58■□□□□ 0.56
CDK4-201ENST00000257904 PPP1R11O60927 126 aaPredicted RBP18.57■□□□□ 0.56
CDK4-201ENST00000257904 CACNB1Q02641 598 aaPredicted RBP18.57■□□□□ 0.56
CDK4-201ENST00000257904 IFI16Q16666 785 aaKnown RBP18.57■□□□□ 0.56
CDK4-201ENST00000257904 DPY19L2P1Q6NXN4 242 aa18.57■□□□□ 0.56
CDK4-201ENST00000257904 C15orf52Q6ZUT6 534 aaKnown RBP18.57■□□□□ 0.56
CDK4-201ENST00000257904 GPBP1Q86WP2 473 aa18.57■□□□□ 0.56
CDK4-201ENST00000257904 CUL5Q93034 780 aa18.57■□□□□ 0.56
CDK4-201ENST00000257904 CALR3Q96L12 384 aaKnown RBP18.57■□□□□ 0.56
CDK4-201ENST00000257904 BHMG1C9JSJ3 638 aaPredicted RBP18.56■□□□□ 0.56
CDK4-201ENST00000257904 H0YGN5 161 aa18.56■□□□□ 0.56
CDK4-201ENST00000257904 GCOM1H8Y6P7 765 aaPredicted RBP18.56■□□□□ 0.56
CDK4-201ENST00000257904 CETN3O15182 167 aa18.56■□□□□ 0.56
CDK4-201ENST00000257904 CEP104O60308 925 aa18.56■□□□□ 0.56
CDK4-201ENST00000257904 UFL1O94874 794 aa18.56■□□□□ 0.56
CDK4-201ENST00000257904 FAM107AO95990 144 aa18.56■□□□□ 0.56
CDK4-201ENST00000257904 MYZAPP0CAP1 466 aa18.56■□□□□ 0.56
CDK4-201ENST00000257904 ACTN1P12814 892 aa18.56■□□□□ 0.56
CDK4-201ENST00000257904 CYP11B2P19099 503 aa18.56■□□□□ 0.56
CDK4-201ENST00000257904 ARFGAP2Q8N6H7 521 aa18.56■□□□□ 0.56
CDK4-201ENST00000257904 HDAC9Q9UKV0 1011 aa18.56■□□□□ 0.56
CDK4-201ENST00000257904 NFS1Q9Y697 457 aa18.56■□□□□ 0.56
CDK4-201ENST00000257904 BZW2Q9Y6E2 419 aaKnown RBP18.56■□□□□ 0.56
CDK4-201ENST00000257904 POTEB3A0JP26 581 aa18.56■□□□□ 0.56
CDK4-201ENST00000257904 FRMD3A2A2Y4 597 aa18.56■□□□□ 0.56
CDK4-201ENST00000257904 POTECB2RU33 542 aa18.56■□□□□ 0.56
CDK4-201ENST00000257904 HDLBPQ00341 1268 aaKnown RBP18.56■□□□□ 0.56
CDK4-201ENST00000257904 UAP1Q16222 522 aaPredicted RBP18.56■□□□□ 0.56
CDK4-201ENST00000257904 POTEBQ6S5H4 581 aa18.56■□□□□ 0.56
CDK4-201ENST00000257904 ADGRF4Q8IZF3 695 aa18.56■□□□□ 0.56
CDK4-201ENST00000257904 LRRC45Q96CN5 670 aa18.56■□□□□ 0.56
CDK4-201ENST00000257904 GOLPH3Q9H4A6 298 aa18.56■□□□□ 0.56
CDK4-201ENST00000257904 GGA2Q9UJY4 613 aa18.56■□□□□ 0.56
CDK4-201ENST00000257904 TNS1Q9HBL0 1735 aaKnown RBP18.55■□□□□ 0.56
CDK4-201ENST00000257904 ZBTB48P10074 688 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms