RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 HUS1O60921 280 aa18.32■□□□□ 0.52
SORT1-201ENST00000256637 POLR3FQ9H1D9 316 aaPredicted RBP18.32■□□□□ 0.52
SORT1-201ENST00000256637 MED7O43513 233 aa18.32■□□□□ 0.52
SORT1-201ENST00000256637 DDHD2O94830 711 aa18.32■□□□□ 0.52
SORT1-201ENST00000256637 KIF12Q96FN5 646 aa18.32■□□□□ 0.52
SORT1-201ENST00000256637 PARVGQ9HBI0 331 aa18.32■□□□□ 0.52
SORT1-201ENST00000256637 ESRRBO95718 433 aa18.32■□□□□ 0.52
SORT1-201ENST00000256637 RSBN1LQ6PCB5 846 aaPredicted RBP18.32■□□□□ 0.52
SORT1-201ENST00000256637 SAMSN1Q9NSI8 373 aaKnown RBP18.32■□□□□ 0.52
SORT1-201ENST00000256637 ASMTLO95671 621 aa18.31■□□□□ 0.52
SORT1-201ENST00000256637 PPP6R3Q5H9R7 873 aaPredicted RBP18.31■□□□□ 0.52
SORT1-201ENST00000256637 ARMCX2Q7L311 632 aa18.31■□□□□ 0.52
SORT1-201ENST00000256637 IFT43Q96FT9 208 aa18.31■□□□□ 0.52
SORT1-201ENST00000256637 RSPH10B2B2RC85 870 aa18.31■□□□□ 0.52
SORT1-201ENST00000256637 RSPH10BP0C881 870 aa18.31■□□□□ 0.52
SORT1-201ENST00000256637 NNMTP40261 264 aa18.31■□□□□ 0.52
SORT1-201ENST00000256637 ARL4AP40617 200 aa18.31■□□□□ 0.52
SORT1-201ENST00000256637 SMC5Q8IY18 1101 aa18.31■□□□□ 0.52
SORT1-201ENST00000256637 ZNF274Q96GC6 653 aaPredicted RBP18.31■□□□□ 0.52
SORT1-201ENST00000256637 ZCWPW1Q9H0M4 648 aa18.31■□□□□ 0.52
SORT1-201ENST00000256637 FAM217BQ9NTX9 383 aaPredicted RBP18.31■□□□□ 0.52
SORT1-201ENST00000256637 NOL3O60936 208 aaKnown RBP18.31■□□□□ 0.52
SORT1-201ENST00000256637 DCAF4Q8WV16 495 aa18.31■□□□□ 0.52
SORT1-201ENST00000256637 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.31■□□□□ 0.52
SORT1-201ENST00000256637 AOX1Q06278 1338 aa18.31■□□□□ 0.52
SORT1-201ENST00000256637 FAM47DPA6NHR8 397 aa18.31■□□□□ 0.52
SORT1-201ENST00000256637 FAM133AQ8N9E0 248 aa18.31■□□□□ 0.52
SORT1-201ENST00000256637 ACAD9Q9H845 621 aa18.31■□□□□ 0.52
SORT1-201ENST00000256637 MROH7-TTC4A0A0A0MT08 1334 aa18.31■□□□□ 0.52
SORT1-201ENST00000256637 ZNF233A6NK53 670 aa18.31■□□□□ 0.52
SORT1-201ENST00000256637 MAP1SQ66K74 1059 aaPredicted RBP18.31■□□□□ 0.52
SORT1-201ENST00000256637 SP8Q8IXZ3 490 aa18.31■□□□□ 0.52
SORT1-201ENST00000256637 PLCG1P19174 1290 aa18.3■□□□□ 0.52
SORT1-201ENST00000256637 SPON2Q9BUD6 331 aa18.3■□□□□ 0.52
SORT1-201ENST00000256637 GCOM2Q9BZD3 368 aaPredicted RBP18.3■□□□□ 0.52
SORT1-201ENST00000256637 DDNO94850 711 aaPredicted RBP18.3■□□□□ 0.52
SORT1-201ENST00000256637 MAPK6Q16659 721 aa18.3■□□□□ 0.52
SORT1-201ENST00000256637 LGSNQ5TDP6 509 aa18.3■□□□□ 0.52
SORT1-201ENST00000256637 G3BP2Q9UN86 482 aaKnown RBP18.3■□□□□ 0.52
SORT1-201ENST00000256637 TXNDC9O14530 226 aa18.3■□□□□ 0.52
SORT1-201ENST00000256637 PRPSAP2O60256 369 aa18.3■□□□□ 0.52
SORT1-201ENST00000256637 SLC15A2Q16348 729 aa18.3■□□□□ 0.52
SORT1-201ENST00000256637 SSH3Q8TE77 659 aa18.3■□□□□ 0.52
SORT1-201ENST00000256637 BHMT2Q9H2M3 363 aa18.3■□□□□ 0.52
SORT1-201ENST00000256637 SPATA31A6Q5VVP1 1343 aa18.3■□□□□ 0.52
SORT1-201ENST00000256637 DFFAO00273 331 aa18.3■□□□□ 0.52
SORT1-201ENST00000256637 SERPIND1P05546 499 aa18.3■□□□□ 0.52
SORT1-201ENST00000256637 PTPN12Q05209 780 aaKnown RBP18.3■□□□□ 0.52
SORT1-201ENST00000256637 DNAJC24Q6P3W2 148 aa18.3■□□□□ 0.52
SORT1-201ENST00000256637 ARHGEF18Q6ZSZ5 1173 aa18.3■□□□□ 0.52
SORT1-201ENST00000256637 TBC1D16Q8TBP0 767 aa18.3■□□□□ 0.52
SORT1-201ENST00000256637 NSUN6Q8TEA1 469 aaKnown RBP18.3■□□□□ 0.52
SORT1-201ENST00000256637 CYP2E1P05181 493 aaPredicted RBP18.29■□□□□ 0.52
SORT1-201ENST00000256637 BASP1P80723 227 aaKnown RBP18.29■□□□□ 0.52
SORT1-201ENST00000256637 SAAL1Q96ER3 474 aa18.29■□□□□ 0.52
SORT1-201ENST00000256637 POTEMA6NI47 508 aa18.29■□□□□ 0.52
SORT1-201ENST00000256637 RGL2O15211 777 aa18.29■□□□□ 0.52
SORT1-201ENST00000256637 SPTLC1O15269 473 aa18.29■□□□□ 0.52
SORT1-201ENST00000256637 LMBRD2Q68DH5 695 aaPredicted RBP18.29■□□□□ 0.52
SORT1-201ENST00000256637 STMN2Q93045 179 aa18.29■□□□□ 0.52
SORT1-201ENST00000256637 SNX21Q969T3 373 aa18.29■□□□□ 0.52
SORT1-201ENST00000256637 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.29■□□□□ 0.521e-11■□□□□ 8.6
SORT1-201ENST00000256637 EVCP57679 992 aa18.29■□□□□ 0.52
SORT1-201ENST00000256637 BEST2Q8NFU1 509 aa18.29■□□□□ 0.52
SORT1-201ENST00000256637 MTIF3Q9H2K0 278 aaKnown RBP18.29■□□□□ 0.52
SORT1-201ENST00000256637 DNAJB2P25686 324 aa18.29■□□□□ 0.52
SORT1-201ENST00000256637 ATL3Q6DD88 541 aa18.29■□□□□ 0.52
SORT1-201ENST00000256637 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.29■□□□□ 0.52
SORT1-201ENST00000256637 NGRNQ9NPE2 291 aaKnown RBP18.29■□□□□ 0.52
SORT1-201ENST00000256637 RIC8AQ9NPQ8 531 aa18.29■□□□□ 0.52
SORT1-201ENST00000256637 SPATA31A1Q5TZJ5 1347 aa18.29■□□□□ 0.52
SORT1-201ENST00000256637 CAMSAP1Q5T5Y3 1602 aa18.29■□□□□ 0.52
SORT1-201ENST00000256637 ZNF699Q32M78 642 aa18.29■□□□□ 0.52
SORT1-201ENST00000256637 PRR5LQ6MZQ0 368 aa18.29■□□□□ 0.52
SORT1-201ENST00000256637 SFMBT1Q9UHJ3 866 aa18.29■□□□□ 0.52
SORT1-201ENST00000256637 MAGI3Q5TCQ9 1506 aa18.29■□□□□ 0.52
SORT1-201ENST00000256637 ABCA8O94911 1581 aa18.29■□□□□ 0.52
SORT1-201ENST00000256637 AFPP02771 609 aaKnown RBP18.29■□□□□ 0.52
SORT1-201ENST00000256637 ATF2P15336 505 aa18.29■□□□□ 0.52
SORT1-201ENST00000256637 MXD4Q14582 209 aaPredicted RBP18.29■□□□□ 0.52
SORT1-201ENST00000256637 CLEC4GQ6UXB4 293 aa18.29■□□□□ 0.52
SORT1-201ENST00000256637 GJB4Q9NTQ9 266 aa18.29■□□□□ 0.52
SORT1-201ENST00000256637 PQBP1O60828 265 aaKnown RBP18.28■□□□□ 0.52
SORT1-201ENST00000256637 GNASQ5JWF2 1037 aa18.28■□□□□ 0.52
SORT1-201ENST00000256637 GIMAP8Q8ND71 665 aaPredicted RBP18.28■□□□□ 0.52
SORT1-201ENST00000256637 ZNF70Q9UC06 446 aaPredicted RBP18.28■□□□□ 0.52
SORT1-201ENST00000256637 GBP1P32455 592 aa18.28■□□□□ 0.52
SORT1-201ENST00000256637 TMCO5AQ8N6Q1 288 aa18.28■□□□□ 0.52
SORT1-201ENST00000256637 MAP3K20Q9NYL2 800 aaKnown RBP18.28■□□□□ 0.52
SORT1-201ENST00000256637 PREX2Q70Z35 1606 aa18.28■□□□□ 0.52
SORT1-201ENST00000256637 KRT10P13645 584 aa18.28■□□□□ 0.52
SORT1-201ENST00000256637 EPHA10Q5JZY3 1008 aa18.28■□□□□ 0.52
SORT1-201ENST00000256637 DNAJC17Q9NVM6 304 aaKnown RBP18.28■□□□□ 0.52
SORT1-201ENST00000256637 NPHP3-ACAD11A0A0J9YXS1 232 aa18.28■□□□□ 0.52
SORT1-201ENST00000256637 GALNT17Q6IS24 598 aa18.28■□□□□ 0.52
SORT1-201ENST00000256637 PBXIP1Q96AQ6 731 aa18.28■□□□□ 0.52
SORT1-201ENST00000256637 BRIP1Q9BX63 1249 aa18.28■□□□□ 0.52
SORT1-201ENST00000256637 IVLP07476 585 aa18.28■□□□□ 0.52
SORT1-201ENST00000256637 LONP1P36776 959 aaKnown RBP18.28■□□□□ 0.52
SORT1-201ENST00000256637 IFT20Q8IY31 132 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms