RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 SLC4A7Q9Y6M7 1214 aa26.05■■□□□ 1.76
LSM4-201ENST00000252816 JAK2O60674 1132 aa26.04■■□□□ 1.76
LSM4-201ENST00000252816 PARNO95453 639 aaKnown RBP26.04■■□□□ 1.76
LSM4-201ENST00000252816 ACTN1P12814 892 aa26.04■■□□□ 1.76
LSM4-201ENST00000252816 TCTN1Q2MV58 587 aa26.04■■□□□ 1.76
LSM4-201ENST00000252816 MARCH8Q5T0T0 291 aa26.04■■□□□ 1.76
LSM4-201ENST00000252816 PLPPR4Q7Z2D5 763 aa26.04■■□□□ 1.76
LSM4-201ENST00000252816 OXER1Q8TDS5 423 aa26.04■■□□□ 1.76
LSM4-201ENST00000252816 GUCD1Q96NT3 240 aa26.04■■□□□ 1.76
LSM4-201ENST00000252816 COL6A3P12111 3177 aa26.03■■□□□ 1.76
LSM4-201ENST00000252816 RSPH10B2B2RC85 870 aa26.03■■□□□ 1.76
LSM4-201ENST00000252816 MSH4O15457 936 aa26.03■■□□□ 1.76
LSM4-201ENST00000252816 TDP2O95551 362 aa26.03■■□□□ 1.76
LSM4-201ENST00000252816 RSPH10BP0C881 870 aa26.03■■□□□ 1.76
LSM4-201ENST00000252816 INSRRP14616 1297 aa26.03■■□□□ 1.76
LSM4-201ENST00000252816 XBP1P17861 261 aa26.03■■□□□ 1.76
LSM4-201ENST00000252816 RBM25P49756 843 aaKnown RBP26.03■■□□□ 1.76
LSM4-201ENST00000252816 PLCB4Q15147 1175 aa26.03■■□□□ 1.76
LSM4-201ENST00000252816 RUFY4Q6ZNE9 571 aa26.03■■□□□ 1.76
LSM4-201ENST00000252816 KRT25Q7Z3Z0 450 aa26.03■■□□□ 1.76
LSM4-201ENST00000252816 CCDC60Q8IWA6 550 aaPredicted RBP26.03■■□□□ 1.76
LSM4-201ENST00000252816 LIMCH1Q9UPQ0 1083 aa26.03■■□□□ 1.76
LSM4-201ENST00000252816 CDH23Q9H251 3354 aa26.03■■□□□ 1.76
LSM4-201ENST00000252816 CYP3A7-CYP3A51PA0A087WV96 503 aa26.02■■□□□ 1.76
LSM4-201ENST00000252816 MBLAC1A4D2B0 266 aaPredicted RBP26.02■■□□□ 1.76
LSM4-201ENST00000252816 CYP3A7P24462 503 aa26.02■■□□□ 1.76
LSM4-201ENST00000252816 NONOQ15233 471 aaKnown RBP eCLIP26.02■■□□□ 1.76
LSM4-201ENST00000252816 INF2Q27J81 1249 aa26.02■■□□□ 1.76
LSM4-201ENST00000252816 ZNF746Q6NUN9 644 aaPredicted RBP26.02■■□□□ 1.76
LSM4-201ENST00000252816 WASF1Q92558 559 aa26.02■■□□□ 1.76
LSM4-201ENST00000252816 TIFAQ96CG3 184 aa26.02■■□□□ 1.76
LSM4-201ENST00000252816 ZBTB10Q96DT7 871 aa26.02■■□□□ 1.76
LSM4-201ENST00000252816 OSBPL7Q9BZF2 842 aa26.02■■□□□ 1.76
LSM4-201ENST00000252816 TUBE1Q9UJT0 475 aa26.02■■□□□ 1.76
LSM4-201ENST00000252816 CHD9Q3L8U1 2897 aa26.02■■□□□ 1.76
LSM4-201ENST00000252816 BACH1O14867 736 aa26.01■■□□□ 1.75
LSM4-201ENST00000252816 CAND2O75155 1236 aa26.01■■□□□ 1.75
LSM4-201ENST00000252816 CTSHP09668 335 aa26.01■■□□□ 1.75
LSM4-201ENST00000252816 RABGGTBP53611 331 aa26.01■■□□□ 1.75
LSM4-201ENST00000252816 IGBP1P78318 339 aa26.01■■□□□ 1.75
LSM4-201ENST00000252816 Q4G0T1 1027 aa26.01■■□□□ 1.75
LSM4-201ENST00000252816 MIS18BP1Q6P0N0 1132 aa26.01■■□□□ 1.75
LSM4-201ENST00000252816 KAT6AQ92794 2004 aa26.01■■□□□ 1.75
LSM4-201ENST00000252816 SLC5A5Q92911 643 aa26.01■■□□□ 1.75
LSM4-201ENST00000252816 GJA10Q969M2 543 aa26.01■■□□□ 1.75
LSM4-201ENST00000252816 MBOAT7Q96N66 472 aa26.01■■□□□ 1.75
LSM4-201ENST00000252816 TRPC6Q9Y210 931 aa26.01■■□□□ 1.75
LSM4-201ENST00000252816 TMEM265A0A087WTH1 108 aa26■■□□□ 1.75
LSM4-201ENST00000252816 ATP2A2P16615 1042 aaKnown RBP26■■□□□ 1.75
LSM4-201ENST00000252816 KRT76Q01546 638 aa26■■□□□ 1.75
LSM4-201ENST00000252816 SWSAP1Q6NVH7 229 aa26■■□□□ 1.75
LSM4-201ENST00000252816 CNKSR3Q6P9H4 555 aa26■■□□□ 1.75
LSM4-201ENST00000252816 TRAPPC12Q8WVT3 735 aa26■■□□□ 1.75
LSM4-201ENST00000252816 ZNF302Q9NR11 478 aa26■■□□□ 1.75
LSM4-201ENST00000252816 YBX2Q9Y2T7 364 aaKnown RBP26■■□□□ 1.75
LSM4-201ENST00000252816 CCDC194A0A1B0GVG4 234 aa25.99■■□□□ 1.75
LSM4-201ENST00000252816 POTEB3A0JP26 581 aa25.99■■□□□ 1.75
LSM4-201ENST00000252816 BAIAP3O94812 1187 aa25.99■■□□□ 1.75
LSM4-201ENST00000252816 SLC26A2P50443 739 aa25.99■■□□□ 1.75
LSM4-201ENST00000252816 EARS2Q5JPH6 523 aaKnown RBP25.99■■□□□ 1.75
LSM4-201ENST00000252816 FAM160B1Q5W0V3 765 aa25.99■■□□□ 1.75
LSM4-201ENST00000252816 TAF2Q6P1X5 1199 aa25.99■■□□□ 1.75
LSM4-201ENST00000252816 PDXDC2PQ6P474 469 aa25.99■■□□□ 1.75
LSM4-201ENST00000252816 POTEBQ6S5H4 581 aa25.99■■□□□ 1.75
LSM4-201ENST00000252816 SMAP1Q8IYB5 467 aaPredicted RBP25.99■■□□□ 1.75
LSM4-201ENST00000252816 RRN3P2A6NIE6 340 aa25.98■■□□□ 1.75
LSM4-201ENST00000252816 MYOGP15173 224 aa25.98■■□□□ 1.75
LSM4-201ENST00000252816 ATP4AP20648 1035 aa25.98■■□□□ 1.75
LSM4-201ENST00000252816 FOSBP53539 338 aa25.98■■□□□ 1.75
LSM4-201ENST00000252816 RAB30Q15771 203 aa25.98■■□□□ 1.75
LSM4-201ENST00000252816 FAM26DQ5JW98 314 aa25.98■■□□□ 1.75
LSM4-201ENST00000252816 MOXD1Q6UVY6 613 aa25.98■■□□□ 1.75
LSM4-201ENST00000252816 PIK3AP1Q6ZUJ8 805 aa25.98■■□□□ 1.75
LSM4-201ENST00000252816 RPAINQ86UA6 219 aa25.98■■□□□ 1.75
LSM4-201ENST00000252816 CCDC83Q8IWF9 413 aa25.98■■□□□ 1.75
LSM4-201ENST00000252816 RIT2Q99578 217 aa25.98■■□□□ 1.75
LSM4-201ENST00000252816 PCDHA10Q9Y5I2 948 aa25.98■■□□□ 1.75
LSM4-201ENST00000252816 GAS7O60861 476 aa25.97■■□□□ 1.75
LSM4-201ENST00000252816 WDR5P61964 334 aaKnown RBP25.97■■□□□ 1.75
LSM4-201ENST00000252816 NR5A1Q13285 461 aa25.97■■□□□ 1.75
LSM4-201ENST00000252816 LETM2Q2VYF4 491 aa25.97■■□□□ 1.75
LSM4-201ENST00000252816 LRCH2Q5VUJ6 765 aa25.97■■□□□ 1.75
LSM4-201ENST00000252816 DBF4BQ8NFT6 615 aa25.97■■□□□ 1.75
LSM4-201ENST00000252816 ETNPPLQ8TBG4 499 aa25.97■■□□□ 1.75
LSM4-201ENST00000252816 ATP8B4Q8TF62 1192 aa25.97■■□□□ 1.75
LSM4-201ENST00000252816 DNAJB3Q8WWF6 145 aa25.97■■□□□ 1.75
LSM4-201ENST00000252816 SLC9A7Q96T83 725 aa25.97■■□□□ 1.75
LSM4-201ENST00000252816 CDX2Q99626 313 aaPredicted RBP25.97■■□□□ 1.75
LSM4-201ENST00000252816 ZNF576Q9H609 170 aa25.97■■□□□ 1.75
LSM4-201ENST00000252816 TCEAL9Q9UHQ7 104 aa25.97■■□□□ 1.75
LSM4-201ENST00000252816 MSRAQ9UJ68 235 aa25.97■■□□□ 1.75
LSM4-201ENST00000252816 STXBP5LQ9Y2K9 1186 aa25.97■■□□□ 1.75
LSM4-201ENST00000252816 MAFBQ9Y5Q3 323 aaPredicted RBP25.97■■□□□ 1.75
LSM4-201ENST00000252816 FAM205CA6NFA0 338 aa25.96■■□□□ 1.75
LSM4-201ENST00000252816 SLC37A4O43826 429 aa25.96■■□□□ 1.75
LSM4-201ENST00000252816 PSMD10O75832 226 aa25.96■■□□□ 1.75
LSM4-201ENST00000252816 CHRNA1P02708 482 aa25.96■■□□□ 1.75
LSM4-201ENST00000252816 PSAPP07602 524 aa25.96■■□□□ 1.75
LSM4-201ENST00000252816 KRT2P35908 639 aa25.96■■□□□ 1.75
LSM4-201ENST00000252816 PLEKHG4Q58EX7 1191 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms