RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 NOP56O00567 594 aaKnown RBP11.88□□□□□ -0.51
VPS50-201ENST00000251739 PRC1O43663 620 aa11.88□□□□□ -0.51
VPS50-201ENST00000251739 LIFRP42702 1097 aa11.88□□□□□ -0.51
VPS50-201ENST00000251739 SKIV2LQ15477 1246 aaKnown RBP11.88□□□□□ -0.51
VPS50-201ENST00000251739 FAM26DQ5JW98 314 aa11.88□□□□□ -0.51
VPS50-201ENST00000251739 SRBD1Q8N5C6 995 aaKnown RBP11.88□□□□□ -0.51
VPS50-201ENST00000251739 IL27Q8NEV9 243 aa11.88□□□□□ -0.51
VPS50-201ENST00000251739 CTCFLQ8NI51 663 aaPredicted RBP11.88□□□□□ -0.51
VPS50-201ENST00000251739 LMBR1Q8WVP7 490 aa11.88□□□□□ -0.51
VPS50-201ENST00000251739 HLA-CQ95604 372 aa11.88□□□□□ -0.51
VPS50-201ENST00000251739 RRP36Q96EU6 259 aaKnown RBP11.88□□□□□ -0.51
VPS50-201ENST00000251739 LZTS2Q9BRK4 669 aa11.88□□□□□ -0.51
VPS50-201ENST00000251739 SETD4Q9NVD3 440 aa11.88□□□□□ -0.51
VPS50-201ENST00000251739 WDR81Q562E7 1941 aa11.88□□□□□ -0.51
VPS50-201ENST00000251739 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.87□□□□□ -0.51
VPS50-201ENST00000251739 AMHP03971 560 aa11.87□□□□□ -0.51
VPS50-201ENST00000251739 KCNA2P16389 499 aa11.87□□□□□ -0.51
VPS50-201ENST00000251739 FAM117BQ6P1L5 589 aa11.87□□□□□ -0.51
VPS50-201ENST00000251739 RPAINQ86UA6 219 aa11.87□□□□□ -0.51
VPS50-201ENST00000251739 PIBF1Q8WXW3 757 aa11.87□□□□□ -0.51
VPS50-201ENST00000251739 GPRASP2Q96D09 838 aa11.87□□□□□ -0.51
VPS50-201ENST00000251739 TMEM87BQ96K49 555 aa11.87□□□□□ -0.51
VPS50-201ENST00000251739 RTEL1Q9NZ71 1219 aa11.87□□□□□ -0.51
VPS50-201ENST00000251739 ZNF215Q9UL58 517 aaPredicted RBP11.87□□□□□ -0.51
VPS50-201ENST00000251739 MTUS1Q9ULD2 1270 aa11.87□□□□□ -0.51
VPS50-201ENST00000251739 INSL6Q9Y581 213 aa11.87□□□□□ -0.51
VPS50-201ENST00000251739 SLC27A2O14975 620 aa11.86□□□□□ -0.51
VPS50-201ENST00000251739 MAP3K7O43318 606 aa11.86□□□□□ -0.51
VPS50-201ENST00000251739 ATP9AO75110 1047 aa11.86□□□□□ -0.51
VPS50-201ENST00000251739 CTSHP09668 335 aa11.86□□□□□ -0.51
VPS50-201ENST00000251739 ITGB5P18084 799 aa11.86□□□□□ -0.51
VPS50-201ENST00000251739 COL9A1P20849 921 aa11.86□□□□□ -0.51
VPS50-201ENST00000251739 MCM5P33992 734 aa11.86□□□□□ -0.51
VPS50-201ENST00000251739 GNAQP50148 359 aa11.86□□□□□ -0.51
VPS50-201ENST00000251739 NECTIN1Q15223 517 aa11.86□□□□□ -0.51
VPS50-201ENST00000251739 C6orf132Q5T0Z8 1188 aa11.86□□□□□ -0.51
VPS50-201ENST00000251739 CASC1Q6TDU7 716 aa11.86□□□□□ -0.51
VPS50-201ENST00000251739 TMTC3Q6ZXV5 915 aa11.86□□□□□ -0.51
VPS50-201ENST00000251739 SGMS1Q86VZ5 419 aa11.86□□□□□ -0.51
VPS50-201ENST00000251739 MYOCDQ8IZQ8 938 aa11.86□□□□□ -0.51
VPS50-201ENST00000251739 TMTC2Q8N394 836 aa11.86□□□□□ -0.51
VPS50-201ENST00000251739 SMARCC2Q8TAQ2 1214 aa11.86□□□□□ -0.51
VPS50-201ENST00000251739 SEPT8Q92599 483 aa11.86□□□□□ -0.51
VPS50-201ENST00000251739 TOP1MTQ969P6 601 aa11.86□□□□□ -0.51
VPS50-201ENST00000251739 C17orf80Q9BSJ5 609 aa11.86□□□□□ -0.51
VPS50-201ENST00000251739 ESYT1Q9BSJ8 1104 aa11.86□□□□□ -0.51
VPS50-201ENST00000251739 RC3H2Q9HBD1 1191 aaKnown RBP11.86□□□□□ -0.51
VPS50-201ENST00000251739 SEC63Q9UGP8 760 aaKnown RBP11.86□□□□□ -0.51
VPS50-201ENST00000251739 UBIAD1Q9Y5Z9 338 aa11.86□□□□□ -0.51
VPS50-201ENST00000251739 TRIOO75962 3097 aa11.86□□□□□ -0.51
VPS50-201ENST00000251739 NRCAMQ92823 1304 aa11.86□□□□□ -0.51
VPS50-201ENST00000251739 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.85□□□□□ -0.51
VPS50-201ENST00000251739 GSTTP1A0A1W2PQM5 241 aa11.85□□□□□ -0.51
VPS50-201ENST00000251739 MBLAC1A4D2B0 266 aaPredicted RBP11.85□□□□□ -0.51
VPS50-201ENST00000251739 LINC00271P0C7V0 271 aa11.85□□□□□ -0.51
VPS50-201ENST00000251739 CALM1P0DP23 149 aa11.85□□□□□ -0.51
VPS50-201ENST00000251739 CALM2P0DP24 149 aa11.85□□□□□ -0.51
VPS50-201ENST00000251739 CALM3P0DP25 149 aa11.85□□□□□ -0.51
VPS50-201ENST00000251739 GNAT1P11488 350 aa11.85□□□□□ -0.51
VPS50-201ENST00000251739 RXRAP19793 462 aa11.85□□□□□ -0.51
VPS50-201ENST00000251739 IRX6P78412 446 aaPredicted RBP11.85□□□□□ -0.51
VPS50-201ENST00000251739 MGAT3Q09327 533 aa11.85□□□□□ -0.51
VPS50-201ENST00000251739 COL19A1Q14993 1142 aa11.85□□□□□ -0.51
VPS50-201ENST00000251739 CREB3L3Q68CJ9 461 aa11.85□□□□□ -0.51
VPS50-201ENST00000251739 NLRX1Q86UT6 975 aa11.85□□□□□ -0.51
VPS50-201ENST00000251739 CMTR1Q8N1G2 835 aaKnown RBP11.85□□□□□ -0.51
VPS50-201ENST00000251739 GIMAP8Q8ND71 665 aaPredicted RBP11.85□□□□□ -0.51
VPS50-201ENST00000251739 APBB2Q92870 758 aa11.85□□□□□ -0.51
VPS50-201ENST00000251739 CUL5Q93034 780 aa11.85□□□□□ -0.51
VPS50-201ENST00000251739 CDHR1Q96JP9 859 aa11.85□□□□□ -0.51
VPS50-201ENST00000251739 UBE2ZQ9H832 354 aaPredicted RBP11.85□□□□□ -0.51
VPS50-201ENST00000251739 PSTPIP2Q9H939 334 aa11.85□□□□□ -0.51
VPS50-201ENST00000251739 EHMT1Q9H9B1 1298 aa11.85□□□□□ -0.51
VPS50-201ENST00000251739 C5orf42Q9H799 3197 aa11.85□□□□□ -0.51
VPS50-201ENST00000251739 CHRNA1P02708 482 aa11.84□□□□□ -0.51
VPS50-201ENST00000251739 TCF7P36402 384 aaPredicted RBP11.84□□□□□ -0.51
VPS50-201ENST00000251739 ARHGAP4P98171 946 aa11.84□□□□□ -0.51
VPS50-201ENST00000251739 SP4Q02446 784 aa11.84□□□□□ -0.51
VPS50-201ENST00000251739 FUT2Q10981 343 aa11.84□□□□□ -0.51
VPS50-201ENST00000251739 TSR1Q2NL82 804 aaKnown RBP11.84□□□□□ -0.51
VPS50-201ENST00000251739 EPC2Q52LR7 807 aa11.84□□□□□ -0.51
VPS50-201ENST00000251739 MARCH8Q5T0T0 291 aa11.84□□□□□ -0.51
VPS50-201ENST00000251739 UTP14CQ5TAP6 766 aaKnown RBP11.84□□□□□ -0.51
VPS50-201ENST00000251739 TAF2Q6P1X5 1199 aa11.84□□□□□ -0.51
VPS50-201ENST00000251739 RUFY4Q6ZNE9 571 aa11.84□□□□□ -0.51
VPS50-201ENST00000251739 TEX2Q8IWB9 1127 aa11.84□□□□□ -0.51
VPS50-201ENST00000251739 MRPL38Q96DV4 380 aaKnown RBP11.84□□□□□ -0.51
VPS50-201ENST00000251739 SAMD11Q96NU1 681 aa11.84□□□□□ -0.51
VPS50-201ENST00000251739 IFIH1Q9BYX4 1025 aaKnown RBP11.84□□□□□ -0.51
VPS50-201ENST00000251739 RAPGEFL1Q9UHV5 662 aa11.84□□□□□ -0.51
VPS50-201ENST00000251739 EVPLQ92817 2033 aa11.84□□□□□ -0.51
VPS50-201ENST00000251739 CNTNAP5Q8WYK1 1306 aa11.84□□□□□ -0.51
VPS50-201ENST00000251739 MYH9P35579 1960 aaKnown RBP11.83□□□□□ -0.52
VPS50-201ENST00000251739 hCG_1642624A0A1W2PR95 340 aa11.83□□□□□ -0.52
VPS50-201ENST00000251739 CCDC69A6NI79 296 aa11.83□□□□□ -0.52
VPS50-201ENST00000251739 H3BNC9 293 aa11.83□□□□□ -0.52
VPS50-201ENST00000251739 ARHGAP33O14559 1287 aa11.83□□□□□ -0.52
VPS50-201ENST00000251739 UBE2SQ16763 222 aa11.83□□□□□ -0.52
VPS50-201ENST00000251739 APOA5Q6Q788 366 aa11.83□□□□□ -0.52
VPS50-201ENST00000251739 NFXL1Q6ZNB6 911 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms