RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 MYBP10242 640 aa27.79■■■□□ 2.04
TMEM55B-201ENST00000250489 ARP10275 920 aa27.79■■■□□ 2.04
TMEM55B-201ENST00000250489 NR2F2P24468 414 aa27.79■■■□□ 2.04
TMEM55B-201ENST00000250489 TPH2Q8IWU9 490 aa27.79■■■□□ 2.04
TMEM55B-201ENST00000250489 ZFP91Q96JP5 570 aaPredicted RBP27.79■■■□□ 2.04
TMEM55B-201ENST00000250489 BRCA1P38398 1863 aaKnown RBP27.79■■■□□ 2.04
TMEM55B-201ENST00000250489 VAV2P52735 878 aa27.79■■■□□ 2.04
TMEM55B-201ENST00000250489 CYP27A1Q02318 531 aa27.79■■■□□ 2.04
TMEM55B-201ENST00000250489 TNFAIP1Q13829 316 aa27.79■■■□□ 2.04
TMEM55B-201ENST00000250489 WHAMMP3Q1A5X7 153 aa27.79■■■□□ 2.04
TMEM55B-201ENST00000250489 EHBP1Q8NDI1 1231 aa27.79■■■□□ 2.04
TMEM55B-201ENST00000250489 PIGOQ8TEQ8 1089 aa27.79■■■□□ 2.04
TMEM55B-201ENST00000250489 ZNF577Q9BSK1 485 aa27.79■■■□□ 2.04
TMEM55B-201ENST00000250489 WDR11Q9BZH6 1224 aa27.79■■■□□ 2.04
TMEM55B-201ENST00000250489 PUF60Q9UHX1 559 aaKnown RBP27.79■■■□□ 2.04
TMEM55B-201ENST00000250489 PRPF6O94906 941 aaKnown RBP27.78■■■□□ 2.04
TMEM55B-201ENST00000250489 CACNA2D4Q7Z3S7 1137 aa27.78■■■□□ 2.04
TMEM55B-201ENST00000250489 PRPF38AQ8NAV1 312 aaKnown RBP27.78■■■□□ 2.04
TMEM55B-201ENST00000250489 LPAR1Q92633 364 aa27.78■■■□□ 2.04
TMEM55B-201ENST00000250489 CEP72Q9P209 647 aa27.78■■■□□ 2.04
TMEM55B-201ENST00000250489 PDXKO00764 312 aa27.77■■■□□ 2.04
TMEM55B-201ENST00000250489 GAP43P17677 238 aa27.77■■■□□ 2.04
TMEM55B-201ENST00000250489 MUTP22033 750 aa27.77■■■□□ 2.04
TMEM55B-201ENST00000250489 RPS12P25398 132 aaKnown RBP27.77■■■□□ 2.04
TMEM55B-201ENST00000250489 SPA17Q15506 151 aa27.77■■■□□ 2.04
TMEM55B-201ENST00000250489 PURBQ96QR8 312 aaKnown RBP27.77■■■□□ 2.04
TMEM55B-201ENST00000250489 KIAA1683Q9H0B3 1180 aa27.77■■■□□ 2.04
TMEM55B-201ENST00000250489 UNC45AQ9H3U1 944 aa27.77■■■□□ 2.04
TMEM55B-201ENST00000250489 ZSWIM4Q9H7M6 989 aa27.77■■■□□ 2.04
TMEM55B-201ENST00000250489 NOL4O94818 638 aa27.77■■■□□ 2.04
TMEM55B-201ENST00000250489 LCA5LO95447 670 aa27.77■■■□□ 2.04
TMEM55B-201ENST00000250489 ZSCAN20P17040 1043 aaPredicted RBP27.77■■■□□ 2.04
TMEM55B-201ENST00000250489 EIF4A3P38919 411 aaKnown RBP27.77■■■□□ 2.04
TMEM55B-201ENST00000250489 KIF11P52732 1056 aa27.77■■■□□ 2.04
TMEM55B-201ENST00000250489 B3GNT9Q6UX72 402 aa27.77■■■□□ 2.04
TMEM55B-201ENST00000250489 KRT26Q7Z3Y9 468 aa27.77■■■□□ 2.04
TMEM55B-201ENST00000250489 HOOK2Q96ED9 719 aa27.77■■■□□ 2.04
TMEM55B-201ENST00000250489 MXRA8Q9BRK3 442 aa27.77■■■□□ 2.04
TMEM55B-201ENST00000250489 LSM14BQ9BX40 385 aaKnown RBP27.77■■■□□ 2.04
TMEM55B-201ENST00000250489 BCAS3Q9H6U6 928 aa27.77■■■□□ 2.04
TMEM55B-201ENST00000250489 OLFML3Q9NRN5 406 aa27.77■■■□□ 2.04
TMEM55B-201ENST00000250489 MYO6Q9UM54 1294 aa27.77■■■□□ 2.04
TMEM55B-201ENST00000250489 RPTORQ8N122 1335 aa27.76■■■□□ 2.03
TMEM55B-201ENST00000250489 CALUO43852 315 aaPredicted RBP27.76■■■□□ 2.03
TMEM55B-201ENST00000250489 C1orf186Q6ZWK4 172 aa27.76■■■□□ 2.03
TMEM55B-201ENST00000250489 CLEC4DQ8WXI8 215 aa27.76■■■□□ 2.03
TMEM55B-201ENST00000250489 TEKT3Q9BXF9 490 aa27.76■■■□□ 2.03
TMEM55B-201ENST00000250489 FAM53CQ9NYF3 392 aa27.76■■■□□ 2.03
TMEM55B-201ENST00000250489 TFRCP02786 760 aaKnown RBP27.75■■■□□ 2.03
TMEM55B-201ENST00000250489 EPHA7Q15375 998 aa27.75■■■□□ 2.03
TMEM55B-201ENST00000250489 FRMD5Q7Z6J6 570 aa27.75■■■□□ 2.03
TMEM55B-201ENST00000250489 TSGA10Q9BZW7 698 aa27.75■■■□□ 2.03
TMEM55B-201ENST00000250489 POLD4Q9HCU8 107 aa27.75■■■□□ 2.03
TMEM55B-201ENST00000250489 GINM1Q9NU53 330 aa27.75■■■□□ 2.03
TMEM55B-201ENST00000250489 TYW1Q9NV66 732 aaKnown RBP27.75■■■□□ 2.03
TMEM55B-201ENST00000250489 COL20A1Q9P218 1284 aa27.75■■■□□ 2.03
TMEM55B-201ENST00000250489 NFIBO00712 420 aa27.75■■■□□ 2.03
TMEM55B-201ENST00000250489 KIF5AQ12840 1032 aa27.75■■■□□ 2.03
TMEM55B-201ENST00000250489 TRAPPC11Q7Z392 1133 aa27.75■■■□□ 2.03
TMEM55B-201ENST00000250489 ASTN1O14525 1302 aa27.74■■■□□ 2.03
TMEM55B-201ENST00000250489 IPO5O00410 1097 aaKnown RBP27.74■■■□□ 2.03
TMEM55B-201ENST00000250489 GCNT3O95395 438 aa27.74■■■□□ 2.03
TMEM55B-201ENST00000250489 GHRHRQ02643 423 aa27.74■■■□□ 2.03
TMEM55B-201ENST00000250489 TMCO3Q6UWJ1 677 aa27.74■■■□□ 2.03
TMEM55B-201ENST00000250489 NUCKS1Q9H1E3 243 aaKnown RBP27.74■■■□□ 2.03
TMEM55B-201ENST00000250489 DEF6Q9H4E7 631 aa27.74■■■□□ 2.03
TMEM55B-201ENST00000250489 NLRC4Q9NPP4 1024 aa27.74■■■□□ 2.03
TMEM55B-201ENST00000250489 WRAP73Q9P2S5 460 aaPredicted RBP27.74■■■□□ 2.03
TMEM55B-201ENST00000250489 PCDHA13Q9Y5I0 950 aa27.74■■■□□ 2.03
TMEM55B-201ENST00000250489 ZBTB39O15060 712 aa27.73■■■□□ 2.03
TMEM55B-201ENST00000250489 CTNND1O60716 968 aaKnown RBP27.73■■■□□ 2.03
TMEM55B-201ENST00000250489 FAM13AO94988 1023 aa27.73■■■□□ 2.03
TMEM55B-201ENST00000250489 ZRANB2O95218 330 aaKnown RBP eCLIP27.73■■■□□ 2.031e-7■■■■■ 26.8
TMEM55B-201ENST00000250489 ITGB5P18084 799 aa27.73■■■□□ 2.03
TMEM55B-201ENST00000250489 POLD1P28340 1107 aa27.73■■■□□ 2.03
TMEM55B-201ENST00000250489 KCNH2Q12809 1159 aa27.73■■■□□ 2.03
TMEM55B-201ENST00000250489 SYN2Q92777 582 aaPredicted RBP27.73■■■□□ 2.03
TMEM55B-201ENST00000250489 NACC1Q96RE7 527 aa27.73■■■□□ 2.03
TMEM55B-201ENST00000250489 RIT2Q99578 217 aa27.73■■■□□ 2.03
TMEM55B-201ENST00000250489 PARD6BQ9BYG5 372 aa27.73■■■□□ 2.03
TMEM55B-201ENST00000250489 IFIH1Q9BYX4 1025 aaKnown RBP27.73■■■□□ 2.03
TMEM55B-201ENST00000250489 DUSP10Q9Y6W6 482 aa27.73■■■□□ 2.03
TMEM55B-201ENST00000250489 FRMPD4Q14CM0 1322 aa27.73■■■□□ 2.03
TMEM55B-201ENST00000250489 MAPK8IP2Q13387 824 aaPredicted RBP27.73■■■□□ 2.03
TMEM55B-201ENST00000250489 DGKZQ13574 1117 aa27.73■■■□□ 2.03
TMEM55B-201ENST00000250489 ASTE1Q2TB18 679 aaPredicted RBP27.73■■■□□ 2.03
TMEM55B-201ENST00000250489 HGSNATQ68CP4 663 aa27.73■■■□□ 2.03
TMEM55B-201ENST00000250489 CRACR2AQ9BSW2 395 aa27.73■■■□□ 2.03
TMEM55B-201ENST00000250489 ARMCX3Q9UH62 379 aaPredicted RBP27.73■■■□□ 2.03
TMEM55B-201ENST00000250489 SSU72P8A0A1W2PR75 194 aa27.72■■■□□ 2.03
TMEM55B-201ENST00000250489 SFI1A8K8P3 1242 aa27.72■■■□□ 2.03
TMEM55B-201ENST00000250489 ENC1O14682 589 aa27.72■■■□□ 2.03
TMEM55B-201ENST00000250489 AKR1B10O60218 316 aa27.72■■■□□ 2.03
TMEM55B-201ENST00000250489 ATP1A1P05023 1023 aaKnown RBP27.72■■■□□ 2.03
TMEM55B-201ENST00000250489 BCRP11274 1271 aa27.72■■■□□ 2.03
TMEM55B-201ENST00000250489 TUBB4BP68371 445 aa27.72■■■□□ 2.03
TMEM55B-201ENST00000250489 PAPD7Q5XG87 772 aaKnown RBP27.72■■■□□ 2.03
TMEM55B-201ENST00000250489 MCF2L2Q86YR7 1114 aa27.72■■■□□ 2.03
TMEM55B-201ENST00000250489 SLC38A10Q9HBR0 1119 aa27.72■■■□□ 2.03
TMEM55B-201ENST00000250489 ASTN2O75129 1339 aaPredicted RBP27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms