RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 ATP1A1P05023 1023 aaKnown RBP23.92■■□□□ 1.42
CLN6-201ENST00000249806 SPA17Q15506 151 aa23.92■■□□□ 1.42
CLN6-201ENST00000249806 FHOD1Q9Y613 1164 aa23.92■■□□□ 1.42
CLN6-201ENST00000249806 MACROD2A1Z1Q3 448 aa23.91■■□□□ 1.42
CLN6-201ENST00000249806 GAS7O60861 476 aa23.91■■□□□ 1.42
CLN6-201ENST00000249806 ZRANB2O95218 330 aaKnown RBP eCLIP23.91■■□□□ 1.42
CLN6-201ENST00000249806 ZBTB7AO95365 584 aa23.91■■□□□ 1.42
CLN6-201ENST00000249806 PTGER2P43116 358 aa23.91■■□□□ 1.42
CLN6-201ENST00000249806 KIF11P52732 1056 aa23.91■■□□□ 1.42
CLN6-201ENST00000249806 VAV2P52735 878 aa23.91■■□□□ 1.42
CLN6-201ENST00000249806 KCNA1Q09470 495 aa23.91■■□□□ 1.42
CLN6-201ENST00000249806 PPP2R5CQ13362 524 aa23.91■■□□□ 1.42
CLN6-201ENST00000249806 PDXDC1Q6P996 788 aa23.91■■□□□ 1.42
CLN6-201ENST00000249806 PPP4R3CPQ6ZMV5 832 aa23.91■■□□□ 1.42
CLN6-201ENST00000249806 JDP2Q8WYK2 163 aa23.91■■□□□ 1.42
CLN6-201ENST00000249806 ZNF577Q9BSK1 485 aa23.91■■□□□ 1.42
CLN6-201ENST00000249806 DEF6Q9H4E7 631 aa23.91■■□□□ 1.42
CLN6-201ENST00000249806 TRAF3IP3Q9Y228 551 aa23.91■■□□□ 1.42
CLN6-201ENST00000249806 ZNF536O15090 1300 aa23.9■■□□□ 1.42
CLN6-201ENST00000249806 KIF5AQ12840 1032 aa23.9■■□□□ 1.42
CLN6-201ENST00000249806 WHAMMP3Q1A5X7 153 aa23.9■■□□□ 1.42
CLN6-201ENST00000249806 LSM14BQ9BX40 385 aaKnown RBP23.9■■□□□ 1.42
CLN6-201ENST00000249806 TUFT1Q9NNX1 390 aa23.9■■□□□ 1.42
CLN6-201ENST00000249806 WRAP73Q9P2S5 460 aaPredicted RBP23.9■■□□□ 1.42
CLN6-201ENST00000249806 CCPG1Q9ULG6 757 aa23.9■■□□□ 1.42
CLN6-201ENST00000249806 PCDHA13Q9Y5I0 950 aa23.9■■□□□ 1.42
CLN6-201ENST00000249806 TBCAO75347 108 aaKnown RBP23.9■■□□□ 1.42
CLN6-201ENST00000249806 GCNT3O95395 438 aa23.9■■□□□ 1.42
CLN6-201ENST00000249806 POLR2FP61218 127 aaKnown RBP23.9■■□□□ 1.42
CLN6-201ENST00000249806 KCNH2Q12809 1159 aa23.9■■□□□ 1.42
CLN6-201ENST00000249806 BMS1Q14692 1282 aaKnown RBP23.9■■□□□ 1.42
CLN6-201ENST00000249806 TRAPPC11Q7Z392 1133 aa23.9■■□□□ 1.42
CLN6-201ENST00000249806 TEX2Q8IWB9 1127 aa23.9■■□□□ 1.42
CLN6-201ENST00000249806 IFIH1Q9BYX4 1025 aaKnown RBP23.9■■□□□ 1.42
CLN6-201ENST00000249806 TAOK3Q9H2K8 898 aa23.9■■□□□ 1.42
CLN6-201ENST00000249806 AKR1B10O60218 316 aa23.89■■□□□ 1.41
CLN6-201ENST00000249806 SRGAP2O75044 1071 aa23.89■■□□□ 1.41
CLN6-201ENST00000249806 PRELPP51888 382 aa23.89■■□□□ 1.41
CLN6-201ENST00000249806 TEPSINQ96N21 525 aa23.89■■□□□ 1.41
CLN6-201ENST00000249806 UNC45AQ9H3U1 944 aa23.89■■□□□ 1.41
CLN6-201ENST00000249806 ANKZF1Q9H8Y5 726 aa23.89■■□□□ 1.41
CLN6-201ENST00000249806 COL20A1Q9P218 1284 aa23.89■■□□□ 1.41
CLN6-201ENST00000249806 NFIBO00712 420 aa23.88■■□□□ 1.41
CLN6-201ENST00000249806 ICAM1P05362 532 aa23.88■■□□□ 1.41
CLN6-201ENST00000249806 PNMA6AP0CW24 399 aaPredicted RBP23.88■■□□□ 1.41
CLN6-201ENST00000249806 DALRD3Q5D0E6 543 aaKnown RBP23.88■■□□□ 1.41
CLN6-201ENST00000249806 CPXCR1Q8N123 301 aa23.88■■□□□ 1.41
CLN6-201ENST00000249806 KRT222Q8N1A0 295 aa23.88■■□□□ 1.41
CLN6-201ENST00000249806 PURBQ96QR8 312 aaKnown RBP23.88■■□□□ 1.41
CLN6-201ENST00000249806 EDEM3Q9BZQ6 932 aa23.88■■□□□ 1.41
CLN6-201ENST00000249806 EHMT1Q9H9B1 1298 aa23.88■■□□□ 1.41
CLN6-201ENST00000249806 CEP72Q9P209 647 aa23.88■■□□□ 1.41
CLN6-201ENST00000249806 ATAD5Q96QE3 1844 aa23.88■■□□□ 1.41
CLN6-201ENST00000249806 CTAGE15A4D2H0 777 aa23.88■■□□□ 1.41
CLN6-201ENST00000249806 CTAGE8P0CG41 777 aa23.88■■□□□ 1.41
CLN6-201ENST00000249806 HGSNATQ68CP4 663 aa23.88■■□□□ 1.41
CLN6-201ENST00000249806 CC2D1AQ6P1N0 951 aaPredicted RBP23.88■■□□□ 1.41
CLN6-201ENST00000249806 C1orf186Q6ZWK4 172 aa23.88■■□□□ 1.41
CLN6-201ENST00000249806 CTAGE6Q86UF2 777 aa23.88■■□□□ 1.41
CLN6-201ENST00000249806 CTAGE4Q8IX94 777 aa23.88■■□□□ 1.41
CLN6-201ENST00000249806 EHBP1Q8NDI1 1231 aa23.88■■□□□ 1.41
CLN6-201ENST00000249806 IKZF4Q9H2S9 585 aa23.88■■□□□ 1.41
CLN6-201ENST00000249806 FAM184BQ9ULE4 1060 aa23.88■■□□□ 1.41
CLN6-201ENST00000249806 ASTN2O75129 1339 aaPredicted RBP23.88■■□□□ 1.41
CLN6-201ENST00000249806 PDXKO00764 312 aa23.87■■□□□ 1.41
CLN6-201ENST00000249806 TLR2O60603 784 aa23.87■■□□□ 1.41
CLN6-201ENST00000249806 LCA5LO95447 670 aa23.87■■□□□ 1.41
CLN6-201ENST00000249806 GFPT1Q06210 699 aaPredicted RBP23.87■■□□□ 1.41
CLN6-201ENST00000249806 IPO5O00410 1097 aaKnown RBP23.87■■□□□ 1.41
CLN6-201ENST00000249806 ITGB5P18084 799 aa23.87■■□□□ 1.41
CLN6-201ENST00000249806 EPS15P42566 896 aa23.87■■□□□ 1.41
CLN6-201ENST00000249806 TGFB2P61812 414 aa23.87■■□□□ 1.41
CLN6-201ENST00000249806 ASTE1Q2TB18 679 aaPredicted RBP23.87■■□□□ 1.41
CLN6-201ENST00000249806 PAPD7Q5XG87 772 aaKnown RBP23.87■■□□□ 1.41
CLN6-201ENST00000249806 PRPF38AQ8NAV1 312 aaKnown RBP23.87■■□□□ 1.41
CLN6-201ENST00000249806 HOOK2Q96ED9 719 aa23.87■■□□□ 1.41
CLN6-201ENST00000249806 PKD2L1Q9P0L9 805 aa23.87■■□□□ 1.41
CLN6-201ENST00000249806 PPP1R1BQ9UD71 204 aaPredicted RBP23.87■■□□□ 1.41
CLN6-201ENST00000249806 SAR1BQ9Y6B6 198 aa23.87■■□□□ 1.41
CLN6-201ENST00000249806 ASTN1O14525 1302 aa23.87■■□□□ 1.41
CLN6-201ENST00000249806 MYH10P35580 1976 aa23.86■■□□□ 1.41
CLN6-201ENST00000249806 RBBP6Q7Z6E9 1792 aaKnown RBP23.86■■□□□ 1.41
CLN6-201ENST00000249806 DDX39AO00148 427 aaKnown RBP23.86■■□□□ 1.41
CLN6-201ENST00000249806 CLIC2O15247 247 aa23.86■■□□□ 1.41
CLN6-201ENST00000249806 AKAP3O75969 853 aa23.86■■□□□ 1.41
CLN6-201ENST00000249806 NMT1P30419 496 aaKnown RBP23.86■■□□□ 1.41
CLN6-201ENST00000249806 HSD17B4P51659 736 aa23.86■■□□□ 1.41
CLN6-201ENST00000249806 MYCT1Q8N699 235 aa23.86■■□□□ 1.41
CLN6-201ENST00000249806 NOA1Q8NC60 698 aaKnown RBP23.86■■□□□ 1.41
CLN6-201ENST00000249806 SECISBP2LQ93073 1101 aaKnown RBP23.86■■□□□ 1.41
CLN6-201ENST00000249806 ARMCX3Q9UH62 379 aaPredicted RBP23.86■■□□□ 1.41
CLN6-201ENST00000249806 NFKBIEO00221 500 aa23.86■■□□□ 1.41
CLN6-201ENST00000249806 CALUO43852 315 aaPredicted RBP23.86■■□□□ 1.41
CLN6-201ENST00000249806 RHOXF2BP0C7M4 288 aa23.86■■□□□ 1.41
CLN6-201ENST00000249806 CASP4P49662 377 aa23.86■■□□□ 1.41
CLN6-201ENST00000249806 BMT2Q1RMZ1 405 aa23.86■■□□□ 1.41
CLN6-201ENST00000249806 ZC2HC1CQ53FD0 456 aaPredicted RBP23.86■■□□□ 1.41
CLN6-201ENST00000249806 SAMD7Q7Z3H4 446 aa23.86■■□□□ 1.41
CLN6-201ENST00000249806 KCTD17Q8N5Z5 321 aa23.86■■□□□ 1.41
CLN6-201ENST00000249806 CLEC4DQ8WXI8 215 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms