RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 TRIM66O15016 1216 aa28.1■■■□□ 2.09
RAB40C-201ENST00000248139 CASP4P49662 377 aa28.1■■■□□ 2.09
RAB40C-201ENST00000248139 USP11P51784 963 aa28.1■■■□□ 2.09
RAB40C-201ENST00000248139 TRADDQ15628 312 aa28.1■■■□□ 2.09
RAB40C-201ENST00000248139 LENG9Q96B70 501 aa28.1■■■□□ 2.09
RAB40C-201ENST00000248139 ZBTB39O15060 712 aa28.1■■■□□ 2.09
RAB40C-201ENST00000248139 CETN3O15182 167 aa28.1■■■□□ 2.09
RAB40C-201ENST00000248139 PRLRP16471 622 aa28.1■■■□□ 2.09
RAB40C-201ENST00000248139 TCERG1LQ5VWI1 586 aa28.1■■■□□ 2.09
RAB40C-201ENST00000248139 SAMD1Q6SPF0 538 aaPredicted RBP28.1■■■□□ 2.09
RAB40C-201ENST00000248139 PROCA1Q8NCQ7 364 aaPredicted RBP28.1■■■□□ 2.09
RAB40C-201ENST00000248139 GANQ9H2C0 597 aa28.1■■■□□ 2.09
RAB40C-201ENST00000248139 BHMT2Q9H2M3 363 aa28.1■■■□□ 2.09
RAB40C-201ENST00000248139 GLI1P08151 1106 aa28.09■■■□□ 2.09
RAB40C-201ENST00000248139 PTK2Q05397 1052 aa28.09■■■□□ 2.09
RAB40C-201ENST00000248139 SLC18A3Q16572 532 aa28.09■■■□□ 2.09
RAB40C-201ENST00000248139 C8orf74Q6P047 294 aa28.09■■■□□ 2.09
RAB40C-201ENST00000248139 GJB7Q6PEY0 223 aa28.09■■■□□ 2.09
RAB40C-201ENST00000248139 PIGOQ8TEQ8 1089 aa28.09■■■□□ 2.09
RAB40C-201ENST00000248139 CCDC17Q96LX7 622 aa28.09■■■□□ 2.09
RAB40C-201ENST00000248139 NDUFB10O96000 172 aa28.08■■■□□ 2.09
RAB40C-201ENST00000248139 DNAJC21Q5F1R6 531 aaKnown RBP28.08■■■□□ 2.09
RAB40C-201ENST00000248139 TTC19Q6DKK2 380 aaPredicted RBP28.08■■■□□ 2.09
RAB40C-201ENST00000248139 GOLGA6L1Q8N7Z2 621 aa28.08■■■□□ 2.09
RAB40C-201ENST00000248139 EDEM3Q9BZQ6 932 aa28.08■■■□□ 2.09
RAB40C-201ENST00000248139 STIM2Q9P246 746 aa28.08■■■□□ 2.09
RAB40C-201ENST00000248139 AJAP1Q9UKB5 411 aaPredicted RBP28.08■■■□□ 2.09
RAB40C-201ENST00000248139 DNM3Q9UQ16 869 aa28.08■■■□□ 2.09
RAB40C-201ENST00000248139 RBAK-RBAKDNI3L0D1 243 aa28.08■■■□□ 2.09
RAB40C-201ENST00000248139 UBXN2AP68543 259 aa28.08■■■□□ 2.09
RAB40C-201ENST00000248139 ASIC2Q16515 512 aa28.08■■■□□ 2.09
RAB40C-201ENST00000248139 IFT81Q8WYA0 676 aa28.08■■■□□ 2.09
RAB40C-201ENST00000248139 RUSC1Q9BVN2 902 aa28.08■■■□□ 2.09
RAB40C-201ENST00000248139 EHD4Q9H223 541 aa28.08■■■□□ 2.09
RAB40C-201ENST00000248139 MYO3BQ8WXR4 1341 aa28.08■■■□□ 2.09
RAB40C-201ENST00000248139 EML1O00423 815 aa28.07■■■□□ 2.08
RAB40C-201ENST00000248139 AKAP3O75969 853 aa28.07■■■□□ 2.08
RAB40C-201ENST00000248139 RRP1BQ14684 758 aaKnown RBP28.07■■■□□ 2.08
RAB40C-201ENST00000248139 NAB2Q15742 525 aa28.07■■■□□ 2.08
RAB40C-201ENST00000248139 KSR1Q8IVT5 923 aa28.07■■■□□ 2.08
RAB40C-201ENST00000248139 AMNQ9BXJ7 453 aa28.07■■■□□ 2.08
RAB40C-201ENST00000248139 CYP3A7-CYP3A51PA0A087WV96 503 aa28.07■■■□□ 2.08
RAB40C-201ENST00000248139 SPDYE3A6NKU9 549 aa28.07■■■□□ 2.08
RAB40C-201ENST00000248139 CYP3A7P24462 503 aa28.07■■■□□ 2.08
RAB40C-201ENST00000248139 CARSP49589 748 aaKnown RBP28.07■■■□□ 2.08
RAB40C-201ENST00000248139 ZNF572Q7Z3I7 529 aaPredicted RBP28.07■■■□□ 2.08
RAB40C-201ENST00000248139 ZNF571Q7Z3V5 609 aaPredicted RBP28.07■■■□□ 2.08
RAB40C-201ENST00000248139 FBXO11Q86XK2 927 aa28.07■■■□□ 2.08
RAB40C-201ENST00000248139 CRYGNQ8WXF5 182 aa28.07■■■□□ 2.08
RAB40C-201ENST00000248139 TDRD3Q9H7E2 651 aaKnown RBP28.07■■■□□ 2.08
RAB40C-201ENST00000248139 PI4KBQ9UBF8 816 aa28.07■■■□□ 2.08
RAB40C-201ENST00000248139 TULP2O00295 520 aa28.06■■■□□ 2.08
RAB40C-201ENST00000248139 MSH4O15457 936 aa28.06■■■□□ 2.08
RAB40C-201ENST00000248139 CHMP2AO43633 222 aa28.06■■■□□ 2.08
RAB40C-201ENST00000248139 SLFN12Q8IYM2 578 aa28.06■■■□□ 2.08
RAB40C-201ENST00000248139 ZDHHC15Q96MV8 337 aa28.06■■■□□ 2.08
RAB40C-201ENST00000248139 UTRNP46939 3433 aa28.06■■■□□ 2.08
RAB40C-201ENST00000248139 FRMD3A2A2Y4 597 aa28.06■■■□□ 2.08
RAB40C-201ENST00000248139 OPLAHO14841 1288 aa28.06■■■□□ 2.08
RAB40C-201ENST00000248139 GNA14O95837 355 aa28.06■■■□□ 2.08
RAB40C-201ENST00000248139 GH2P01242 217 aa28.06■■■□□ 2.08
RAB40C-201ENST00000248139 FAM153BP0C7A2 387 aa28.06■■■□□ 2.08
RAB40C-201ENST00000248139 FAM153CQ494X1 144 aa28.06■■■□□ 2.08
RAB40C-201ENST00000248139 ARMCX3Q9UH62 379 aaPredicted RBP28.06■■■□□ 2.08
RAB40C-201ENST00000248139 FAM153AQ9UHL3 310 aa28.06■■■□□ 2.08
RAB40C-201ENST00000248139 RSPH14Q9UHP6 348 aa28.06■■■□□ 2.08
RAB40C-201ENST00000248139 NPR1P16066 1061 aa28.05■■■□□ 2.08
RAB40C-201ENST00000248139 CTTNQ14247 550 aaKnown RBP28.05■■■□□ 2.08
RAB40C-201ENST00000248139 KNOP1Q1ED39 458 aaKnown RBP28.05■■■□□ 2.08
RAB40C-201ENST00000248139 COL23A1Q86Y22 540 aaPredicted RBP28.05■■■□□ 2.08
RAB40C-201ENST00000248139 RNF10Q8N5U6 811 aaKnown RBP28.05■■■□□ 2.08
RAB40C-201ENST00000248139 DCAF4Q8WV16 495 aa28.05■■■□□ 2.08
RAB40C-201ENST00000248139 MKL1Q969V6 931 aa28.05■■■□□ 2.08
RAB40C-201ENST00000248139 NYAP2Q9P242 653 aa28.05■■■□□ 2.08
RAB40C-201ENST00000248139 NFU1Q9UMS0 254 aa28.05■■■□□ 2.08
RAB40C-201ENST00000248139 PCDHB13Q9Y5F0 798 aa28.05■■■□□ 2.08
RAB40C-201ENST00000248139 MARSP56192 900 aaKnown RBP28.05■■■□□ 2.08
RAB40C-201ENST00000248139 CFAP221Q4G0U5 840 aa28.05■■■□□ 2.08
RAB40C-201ENST00000248139 RBM46Q8TBY0 533 aaKnown RBP28.05■■■□□ 2.08
RAB40C-201ENST00000248139 MBOAT7Q96N66 472 aa28.05■■■□□ 2.08
RAB40C-201ENST00000248139 SPAG5Q96R06 1193 aa28.05■■■□□ 2.08
RAB40C-201ENST00000248139 KRT12Q99456 494 aa28.05■■■□□ 2.08
RAB40C-201ENST00000248139 ANKRD31Q8N7Z5 1873 aa28.05■■■□□ 2.08
RAB40C-201ENST00000248139 A0A1W2PRG0 241 aa28.05■■■□□ 2.08
RAB40C-201ENST00000248139 GRID2IPA4D2P6 1211 aa28.05■■■□□ 2.08
RAB40C-201ENST00000248139 GCNT3O95395 438 aa28.05■■■□□ 2.08
RAB40C-201ENST00000248139 GUCY2DQ02846 1103 aa28.05■■■□□ 2.08
RAB40C-201ENST00000248139 C10orf67Q8IYJ2 551 aa28.05■■■□□ 2.08
RAB40C-201ENST00000248139 EPB41L5Q9HCM4 733 aa28.05■■■□□ 2.08
RAB40C-201ENST00000248139 UCHL3P15374 230 aa28.04■■■□□ 2.08
RAB40C-201ENST00000248139 RPA1P27694 616 aa28.04■■■□□ 2.08
RAB40C-201ENST00000248139 ZNF76P36508 570 aa28.04■■■□□ 2.08
RAB40C-201ENST00000248139 ABCB5Q2M3G0 1257 aa28.04■■■□□ 2.08
RAB40C-201ENST00000248139 DPY19L2P1Q6NXN4 242 aa28.04■■■□□ 2.08
RAB40C-201ENST00000248139 IRF2BP2Q7Z5L9 587 aa28.04■■■□□ 2.08
RAB40C-201ENST00000248139 SYT2Q8N9I0 419 aaPredicted RBP28.04■■■□□ 2.08
RAB40C-201ENST00000248139 LRRC37AA6NMS7 1700 aa28.04■■■□□ 2.08
RAB40C-201ENST00000248139 GOLGA6CA6NDK9 693 aa28.04■■■□□ 2.08
RAB40C-201ENST00000248139 MMP10P09238 476 aa28.04■■■□□ 2.08
RAB40C-201ENST00000248139 GOLGA6DP0CG33 693 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms