RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 ZNF287Q9HBT7 754 aa18.44■□□□□ 0.54
SGPP1-201ENST00000247225 GLI3P10071 1580 aa18.44■□□□□ 0.54
SGPP1-201ENST00000247225 GTF2IP78347 998 aa18.44■□□□□ 0.54
SGPP1-201ENST00000247225 SF3B3Q15393 1217 aaKnown RBP18.44■□□□□ 0.54
SGPP1-201ENST00000247225 GALNT17Q6IS24 598 aa18.44■□□□□ 0.54
SGPP1-201ENST00000247225 MYCBPQ99417 103 aaPredicted RBP18.44■□□□□ 0.54
SGPP1-201ENST00000247225 TMOD4Q9NZQ9 345 aa18.44■□□□□ 0.54
SGPP1-201ENST00000247225 PKD2L1Q9P0L9 805 aa18.44■□□□□ 0.54
SGPP1-201ENST00000247225 BAIAP2L1Q9UHR4 511 aa18.44■□□□□ 0.54
SGPP1-201ENST00000247225 SNX24Q9Y343 169 aa18.44■□□□□ 0.54
SGPP1-201ENST00000247225 NR2E1Q9Y466 385 aa18.44■□□□□ 0.54
SGPP1-201ENST00000247225 NUP188Q5SRE5 1749 aa18.43■□□□□ 0.54
SGPP1-201ENST00000247225 KIF4AO95239 1232 aa18.43■□□□□ 0.54
SGPP1-201ENST00000247225 SHROOM1Q2M3G4 852 aaPredicted RBP18.43■□□□□ 0.54
SGPP1-201ENST00000247225 SPRED3Q2MJR0 410 aa18.43■□□□□ 0.54
SGPP1-201ENST00000247225 WDR66Q8TBY9 1149 aa18.43■□□□□ 0.54
SGPP1-201ENST00000247225 PIGOQ8TEQ8 1089 aa18.43■□□□□ 0.54
SGPP1-201ENST00000247225 CYFIP2Q96F07 1278 aa18.43■□□□□ 0.54
SGPP1-201ENST00000247225 CD2APQ9Y5K6 639 aa18.43■□□□□ 0.54
SGPP1-201ENST00000247225 SLIT2O94813 1529 aa18.43■□□□□ 0.54
SGPP1-201ENST00000247225 LDHCP07864 332 aa18.43■□□□□ 0.54
SGPP1-201ENST00000247225 VIMP08670 466 aaKnown RBP18.43■□□□□ 0.54
SGPP1-201ENST00000247225 ZNF76P36508 570 aa18.43■□□□□ 0.54
SGPP1-201ENST00000247225 FIGNQ5HY92 759 aa18.43■□□□□ 0.54
SGPP1-201ENST00000247225 GLYCTKQ8IVS8 523 aa18.43■□□□□ 0.54
SGPP1-201ENST00000247225 CCDC13Q8IYE1 715 aa18.43■□□□□ 0.54
SGPP1-201ENST00000247225 ZNF219Q9P2Y4 722 aaPredicted RBP18.43■□□□□ 0.54
SGPP1-201ENST00000247225 PTPN22Q9Y2R2 807 aa18.43■□□□□ 0.54
SGPP1-201ENST00000247225 LRP6O75581 1613 aa18.43■□□□□ 0.54
SGPP1-201ENST00000247225 G3V3G9 751 aa18.43■□□□□ 0.54
SGPP1-201ENST00000247225 CYP2J2P51589 502 aa18.43■□□□□ 0.54
SGPP1-201ENST00000247225 DCAF8Q5TAQ9 597 aa18.43■□□□□ 0.54
SGPP1-201ENST00000247225 SFR1Q86XK3 245 aa18.43■□□□□ 0.54
SGPP1-201ENST00000247225 ADGRF4Q8IZF3 695 aa18.43■□□□□ 0.54
SGPP1-201ENST00000247225 LAMB4A4D0S4 1761 aa18.42■□□□□ 0.54
SGPP1-201ENST00000247225 PVALEFA0A1B0GWK0 134 aa18.42■□□□□ 0.54
SGPP1-201ENST00000247225 SPDYE3A6NKU9 549 aa18.42■□□□□ 0.54
SGPP1-201ENST00000247225 OPLAHO14841 1288 aa18.42■□□□□ 0.54
SGPP1-201ENST00000247225 MYBP10242 640 aa18.42■□□□□ 0.54
SGPP1-201ENST00000247225 CDK17Q00537 523 aa18.42■□□□□ 0.54
SGPP1-201ENST00000247225 MEI1Q5TIA1 1274 aa18.42■□□□□ 0.54
SGPP1-201ENST00000247225 OTUD6AQ7L8S5 288 aa18.42■□□□□ 0.54
SGPP1-201ENST00000247225 SCFD1Q8WVM8 642 aa18.42■□□□□ 0.54
SGPP1-201ENST00000247225 ELMO3Q96BJ8 720 aa18.42■□□□□ 0.54
SGPP1-201ENST00000247225 GDF3Q9NR23 364 aa18.42■□□□□ 0.54
SGPP1-201ENST00000247225 STK17AQ9UEE5 414 aa18.42■□□□□ 0.54
SGPP1-201ENST00000247225 CNOT8Q9UFF9 292 aaKnown RBP18.42■□□□□ 0.54
SGPP1-201ENST00000247225 PNMA2Q9UL42 364 aa18.42■□□□□ 0.54
SGPP1-201ENST00000247225 XRCC5P13010 732 aaKnown RBP18.42■□□□□ 0.54
SGPP1-201ENST00000247225 FAM133BQ5BKY9 247 aaKnown RBP18.42■□□□□ 0.54
SGPP1-201ENST00000247225 RNF10Q8N5U6 811 aaKnown RBP18.42■□□□□ 0.54
SGPP1-201ENST00000247225 CAVIN3Q969G5 261 aa18.42■□□□□ 0.54
SGPP1-201ENST00000247225 MAGEF1Q9HAY2 307 aa18.42■□□□□ 0.54
SGPP1-201ENST00000247225 CTNND1O60716 968 aaKnown RBP18.41■□□□□ 0.54
SGPP1-201ENST00000247225 HOXA13P31271 388 aaPredicted RBP18.41■□□□□ 0.54
SGPP1-201ENST00000247225 RBM5P52756 815 aaKnown RBP eCLIP18.41■□□□□ 0.54
SGPP1-201ENST00000247225 TCP11Q8WWU5 503 aa18.41■□□□□ 0.54
SGPP1-201ENST00000247225 GMNCA6NCL1 334 aa18.41■□□□□ 0.54
SGPP1-201ENST00000247225 H2AFZP0C0S5 128 aa18.41■□□□□ 0.54
SGPP1-201ENST00000247225 PRLRP16471 622 aa18.41■□□□□ 0.54
SGPP1-201ENST00000247225 PPP1R2P41236 205 aa18.41■□□□□ 0.54
SGPP1-201ENST00000247225 H2AFVQ71UI9 128 aa18.41■□□□□ 0.54
SGPP1-201ENST00000247225 PHLDB2Q86SQ0 1253 aa18.41■□□□□ 0.54
SGPP1-201ENST00000247225 RIC8AQ9NPQ8 531 aa18.41■□□□□ 0.54
SGPP1-201ENST00000247225 KLC4Q9NSK0 619 aa18.41■□□□□ 0.54
SGPP1-201ENST00000247225 TSKSQ9UJT2 592 aa18.41■□□□□ 0.54
SGPP1-201ENST00000247225 PGRMC1O00264 195 aaKnown RBP18.41■□□□□ 0.54
SGPP1-201ENST00000247225 CLTAP09496 248 aa18.41■□□□□ 0.54
SGPP1-201ENST00000247225 UCHL3P15374 230 aa18.41■□□□□ 0.54
SGPP1-201ENST00000247225 PPP1R7Q15435 360 aa18.41■□□□□ 0.54
SGPP1-201ENST00000247225 ASTE1Q2TB18 679 aaPredicted RBP18.41■□□□□ 0.54
SGPP1-201ENST00000247225 ZNF746Q6NUN9 644 aaPredicted RBP18.41■□□□□ 0.54
SGPP1-201ENST00000247225 KDM7AQ6ZMT4 941 aa18.41■□□□□ 0.54
SGPP1-201ENST00000247225 MTMR9Q96QG7 549 aa18.41■□□□□ 0.54
SGPP1-201ENST00000247225 SH2D3AQ9BRG2 576 aa18.41■□□□□ 0.54
SGPP1-201ENST00000247225 GCNT4Q9P109 453 aa18.41■□□□□ 0.54
SGPP1-201ENST00000247225 COL4A1P02462 1669 aa18.4■□□□□ 0.54
SGPP1-201ENST00000247225 SSU72P8A0A1W2PR75 194 aa18.4■□□□□ 0.54
SGPP1-201ENST00000247225 PPP1R12BO60237 982 aaPredicted RBP18.4■□□□□ 0.54
SGPP1-201ENST00000247225 RFC4P35249 363 aa18.4■□□□□ 0.54
SGPP1-201ENST00000247225 LRRC14Q15048 493 aa18.4■□□□□ 0.54
SGPP1-201ENST00000247225 INPP4AQ96PE3 977 aaPredicted RBP18.4■□□□□ 0.54
SGPP1-201ENST00000247225 NCAPGQ9BPX3 1015 aa18.4■□□□□ 0.54
SGPP1-201ENST00000247225 RGL1Q9NZL6 768 aa18.4■□□□□ 0.54
SGPP1-201ENST00000247225 HNRNPH3P31942 346 aaKnown RBP18.4■□□□□ 0.54
SGPP1-201ENST00000247225 GSTO1P78417 241 aa18.4■□□□□ 0.54
SGPP1-201ENST00000247225 ZNF844Q08AG5 666 aa18.4■□□□□ 0.54
SGPP1-201ENST00000247225 ZNF804AQ7Z570 1209 aa18.4■□□□□ 0.54
SGPP1-201ENST00000247225 WHAMMQ8TF30 809 aa18.4■□□□□ 0.54
SGPP1-201ENST00000247225 HAS1Q92839 578 aa18.4■□□□□ 0.54
SGPP1-201ENST00000247225 DNAJC19Q96DA6 116 aa18.4■□□□□ 0.54
SGPP1-201ENST00000247225 SPZ1Q9BXG8 430 aa18.4■□□□□ 0.54
SGPP1-201ENST00000247225 BHMT2Q9H2M3 363 aa18.4■□□□□ 0.54
SGPP1-201ENST00000247225 DDX20Q9UHI6 824 aaKnown RBP18.4■□□□□ 0.54
SGPP1-201ENST00000247225 UTP11Q9Y3A2 253 aaKnown RBP18.4■□□□□ 0.54
SGPP1-201ENST00000247225 ZBTB39O15060 712 aa18.39■□□□□ 0.54
SGPP1-201ENST00000247225 MED24O75448 989 aa18.39■□□□□ 0.54
SGPP1-201ENST00000247225 TRIM49P0CI25 452 aa18.39■□□□□ 0.54
SGPP1-201ENST00000247225 TRIM49CP0CI26 452 aa18.39■□□□□ 0.54
SGPP1-201ENST00000247225 ITGB3BPQ13352 177 aaPredicted RBP18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms