RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 ADAMTS7Q9UKP4 1686 aa15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 TDP2O95551 362 aa15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 KRT18P05783 430 aaKnown RBP15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 IFNAR2P48551 515 aa15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 TNNI2P48788 182 aa15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 PAPOLAP51003 745 aaKnown RBP15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 RAB27AP51159 221 aa15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 CDK17Q00537 523 aa15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 MKRN4PQ13434 485 aaPredicted RBP15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 LLGL1Q15334 1064 aa15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 GLE1Q53GS7 698 aaKnown RBP15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 NEK8Q86SG6 692 aa15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 KIF2BQ8N4N8 673 aa15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 COA7Q96BR5 231 aa15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 MMTAG2Q9BU76 263 aaKnown RBP15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 FLT1P17948 1338 aa15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 LRP6O75581 1613 aa15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 NPHP3-ACAD11A0A0J9YXS1 232 aa15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 MGRN1O60291 552 aa15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 TRIM37O94972 964 aa15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 DIXDC1Q155Q3 683 aa15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 ZC3H12AQ5D1E8 599 aaKnown RBP15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 FIGNQ5HY92 759 aa15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 MAPKAPK5Q8IW41 473 aa15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 USP38Q8NB14 1042 aa15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 WHAMMQ8TF30 809 aa15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 NSUN4Q96CB9 384 aaKnown RBP15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 C7orf25Q9BPX7 421 aa15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 FGFBP2Q9BYJ0 223 aa15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 TMBIM4Q9HC24 238 aa15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 CD2APQ9Y5K6 639 aa15.43■□□□□ 0.06
PCDHB3-201ENST00000231130 GRID2IPA4D2P6 1211 aa15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 STXBP3O00186 592 aa15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 ITIH3Q06033 890 aa15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 XRCC4Q13426 336 aa15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 NKX1-1Q15270 411 aaPredicted RBP15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 CALCRLQ16602 461 aa15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 PPP4R3AQ6IN85 833 aa15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 SPICE1Q8N0Z3 855 aa15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 TGFBRAP1Q8WUH2 860 aa15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 PIGSQ96S52 555 aa15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 MAD2L2Q9UI95 211 aa15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 DDX60Q8IY21 1712 aaKnown RBP15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 TTI1O43156 1089 aa15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 FGFR1OPO95684 399 aaKnown RBP15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 CDCA2Q69YH5 1023 aaPredicted RBP15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 B4GALNT2Q8NHY0 566 aa15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 ELAC2Q9BQ52 826 aaKnown RBP15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 SEPT11Q9NVA2 429 aaKnown RBP15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 SEC63Q9UGP8 760 aaKnown RBP15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 FRMPD2Q68DX3 1309 aaPredicted RBP15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 ZNF844Q08AG5 666 aa15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 GRB10Q13322 594 aa15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 UAP1Q16222 522 aaPredicted RBP15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 ASIC2Q16515 512 aa15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 DCAF17Q5H9S7 520 aaPredicted RBP15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 DAAM2Q86T65 1068 aa15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 MAGEC3Q8TD91 643 aa15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 CELF1Q92879 486 aaKnown RBP15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 ZNF570Q96NI8 536 aa15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 TRIM51Q9BSJ1 452 aa15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 BARHL2Q9NY43 387 aa15.42■□□□□ 0.06
PCDHB3-201ENST00000231130 SERPING1P05155 500 aa15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 SLCO1A2P46721 670 aa15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 MYOCDQ8IZQ8 938 aa15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 PPP1R12CQ9BZL4 782 aa15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 BLOC1S4Q9NUP1 217 aa15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 LRRD1A4D1F6 860 aa15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 MYL1P05976 194 aa15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 NAB2Q15742 525 aa15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 PDCD2Q16342 344 aaPredicted RBP15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 RNF10Q8N5U6 811 aaKnown RBP15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 TMEM47Q9BQJ4 181 aa15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 C6orf50Q9HD87 102 aa15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 TSKSQ9UJT2 592 aa15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 PNMA2Q9UL42 364 aa15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 ATP6V0A2Q9Y487 856 aa15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 COL4A3BPQ9Y5P4 624 aa15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 GOLGB1Q14789 3259 aaKnown RBP15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 CCT8L1PA6NM43 557 aa15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 SLC37A4O43826 429 aa15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 HNRNPH3P31942 346 aaKnown RBP15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 PRPHP41219 470 aa15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 HERC4Q5GLZ8 1057 aaPredicted RBP15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 KRT79Q5XKE5 535 aa15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 PEX26Q7Z412 305 aa15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 TRIM74Q86UV6 250 aa15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 TRIM73Q86UV7 250 aa15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 DYDC1Q8WWB3 177 aa15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 ANKS1AQ92625 1134 aa15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 BORCS6Q96GS4 357 aa15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 PICK1Q9NRD5 415 aa15.41■□□□□ 0.06
PCDHB3-201ENST00000231130 PHRF1Q9P1Y6 1649 aaKnown RBP15.4■□□□□ 0.06
PCDHB3-201ENST00000231130 NUP188Q5SRE5 1749 aa15.4■□□□□ 0.06
PCDHB3-201ENST00000231130 TRAPPC3O43617 180 aa15.4■□□□□ 0.06
PCDHB3-201ENST00000231130 SMNDC1O75940 238 aaKnown RBP eCLIP15.4■□□□□ 0.06
PCDHB3-201ENST00000231130 ABCB4P21439 1286 aa15.4■□□□□ 0.06
PCDHB3-201ENST00000231130 PPP2R2AP63151 447 aa15.4■□□□□ 0.06
PCDHB3-201ENST00000231130 MEI1Q5TIA1 1274 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms