RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 TTC19Q6DKK2 380 aaPredicted RBP12.94□□□□□ -0.34
TNFAIP1-201ENST00000226225 MLKLQ8NB16 471 aa12.94□□□□□ -0.34
TNFAIP1-201ENST00000226225 BANK1Q8NDB2 785 aa12.94□□□□□ -0.34
TNFAIP1-201ENST00000226225 RABGGTAQ92696 567 aa12.94□□□□□ -0.34
TNFAIP1-201ENST00000226225 FAM20AQ96MK3 541 aa12.94□□□□□ -0.34
TNFAIP1-201ENST00000226225 NT5C3AQ9H0P0 336 aa12.94□□□□□ -0.34
TNFAIP1-201ENST00000226225 A1CFQ9NQ94 594 aaKnown RBP12.94□□□□□ -0.34
TNFAIP1-201ENST00000226225 CCDC175P0C221 793 aa12.94□□□□□ -0.34
TNFAIP1-201ENST00000226225 VSNL1P62760 191 aa12.94□□□□□ -0.34
TNFAIP1-201ENST00000226225 CLEC4DQ8WXI8 215 aa12.94□□□□□ -0.34
TNFAIP1-201ENST00000226225 BHMT2Q9H2M3 363 aa12.94□□□□□ -0.34
TNFAIP1-201ENST00000226225 PNMA2Q9UL42 364 aa12.94□□□□□ -0.34
TNFAIP1-201ENST00000226225 TFR2Q9UP52 801 aa12.94□□□□□ -0.34
TNFAIP1-201ENST00000226225 SOCS7O14512 581 aa12.94□□□□□ -0.34
TNFAIP1-201ENST00000226225 PDIA5Q14554 519 aa12.94□□□□□ -0.34
TNFAIP1-201ENST00000226225 LRRC41Q15345 812 aa12.94□□□□□ -0.34
TNFAIP1-201ENST00000226225 NOL9Q5SY16 702 aaKnown RBP12.94□□□□□ -0.34
TNFAIP1-201ENST00000226225 GSPT2Q8IYD1 628 aaKnown RBP12.94□□□□□ -0.34
TNFAIP1-201ENST00000226225 SLC35F6Q8N357 371 aa12.94□□□□□ -0.34
TNFAIP1-201ENST00000226225 TRIM47Q96LD4 638 aa12.94□□□□□ -0.34
TNFAIP1-201ENST00000226225 GSDMAQ96QA5 445 aa12.94□□□□□ -0.34
TNFAIP1-201ENST00000226225 SPATC1LQ9H0A9 340 aa12.94□□□□□ -0.34
TNFAIP1-201ENST00000226225 ZNF214Q9UL59 606 aaPredicted RBP12.94□□□□□ -0.34
TNFAIP1-201ENST00000226225 MYH4Q9Y623 1939 aa12.94□□□□□ -0.34
TNFAIP1-201ENST00000226225 SFI1A8K8P3 1242 aa12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 TTC31Q49AM3 519 aaPredicted RBP12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 TMEM139Q8IV31 216 aa12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 IGSF22Q8N9C0 903 aa12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 DYDC2Q96IM9 177 aa12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 BTBD7Q9P203 1132 aa12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 PIK3CDO00329 1044 aa12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 CCND2P30279 289 aa12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 FXR2P51116 673 aaKnown RBP eCLIP12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 RBL2Q08999 1139 aa12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 GRB10Q13322 594 aa12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 PPIL2Q13356 520 aa12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 ANKRD20A12PQ8NF67 263 aa12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 DDX12PQ92771 950 aa12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 MXRA8Q9BRK3 442 aa12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 PDCD2LQ9BRP1 358 aa12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 POLR2AP24928 1970 aaKnown RBP12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 IKBKBO14920 756 aa12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 TBCAO75347 108 aaKnown RBP12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 PLA2G4BP0C869 781 aa12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 ORC2Q13416 577 aaPredicted RBP12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 RAD9BQ6WBX8 426 aa12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 HDXQ7Z353 690 aa12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 KCNK18Q7Z418 384 aa12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 NELFCDQ8IXH7 590 aa12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 PCMTD1Q96MG8 357 aaPredicted RBP12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 EIF2AK1Q9BQI3 630 aaKnown RBP12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 FAM204AQ9H8W3 233 aa12.93□□□□□ -0.34
TNFAIP1-201ENST00000226225 NPHP3-ACAD11A0A0J9YXS1 232 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 PDHXO00330 501 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 PSMA7O14818 248 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 MED24O75448 989 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 ITGB5P18084 799 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 GNPTABQ3T906 1256 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 PACS2Q86VP3 889 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 CATSPER3Q86XQ3 398 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 MICALL1Q8N3F8 863 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 EXOC4Q96A65 974 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 ANKZF1Q9H8Y5 726 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 KCND1Q9NSA2 647 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 TUBE1Q9UJT0 475 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 PNMA3Q9UL41 463 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 AGTPBP1Q9UPW5 1226 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 KDM3AQ9Y4C1 1321 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 LOC102724159A0A0B4J2E5 919 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 EIF3JO75822 258 aaKnown RBP12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 DPYDQ12882 1025 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 PWP2Q15269 919 aaKnown RBP12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 NAALADL2Q58DX5 795 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 PDXDC2PQ6P474 469 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 RSRC2Q7L4I2 434 aaKnown RBP12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 BPIFA3Q9BQP9 254 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 EFCC1Q9HA90 598 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 RABGAP1Q9Y3P9 1069 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 ZC3H4Q9UPT8 1303 aaKnown RBP12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 EIF3CLB5ME19 914 aaKnown RBP12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 EML1O00423 815 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 EDIL3O43854 480 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 ERLIN1O75477 346 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 SRGAP1Q7Z6B7 1085 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 NOA1Q8NC60 698 aaKnown RBP12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 C12orf42Q96LP6 360 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 EIF3CQ99613 913 aaKnown RBP12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 MMTAG2Q9BU76 263 aaKnown RBP12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 MOV10L1Q9BXT6 1211 aaKnown RBP12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 PXMP2Q9NR77 195 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 GUCA1BQ9UMX6 200 aa12.92□□□□□ -0.34
TNFAIP1-201ENST00000226225 AKR1B15C9JRZ8 316 aaPredicted RBP12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 ZBTB39O15060 712 aa12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 CETPP11597 493 aa12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 FCER1AP12319 257 aa12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 PSMC6P62333 389 aa12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 PGM5Q15124 567 aa12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 TKFCQ3LXA3 575 aa12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 PROCA1Q8NCQ7 364 aaPredicted RBP12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 NELFBQ8WX92 580 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms