RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 KIF19Q2TAC6 998 aa11.96□□□□□ -0.49
KNOP1-201ENST00000219837 ANO4Q32M45 955 aa11.96□□□□□ -0.49
KNOP1-201ENST00000219837 CYP4F22Q6NT55 531 aa11.96□□□□□ -0.49
KNOP1-201ENST00000219837 PPP1R2P3Q6NXS1 205 aa11.96□□□□□ -0.49
KNOP1-201ENST00000219837 TRIM42Q8IWZ5 723 aa11.96□□□□□ -0.49
KNOP1-201ENST00000219837 PTPRTO14522 1441 aa11.96□□□□□ -0.5
KNOP1-201ENST00000219837 SH2B2O14492 632 aaPredicted RBP11.96□□□□□ -0.5
KNOP1-201ENST00000219837 FAM83BQ5T0W9 1011 aa11.96□□□□□ -0.5
KNOP1-201ENST00000219837 C10orf76Q5T2E6 689 aa11.96□□□□□ -0.5
KNOP1-201ENST00000219837 SMAP1Q8IYB5 467 aaPredicted RBP11.96□□□□□ -0.5
KNOP1-201ENST00000219837 FAF2Q96CS3 445 aa11.96□□□□□ -0.5
KNOP1-201ENST00000219837 RNF26Q9BY78 433 aaPredicted RBP11.96□□□□□ -0.5
KNOP1-201ENST00000219837 RAVER2Q9HCJ3 691 aaKnown RBP11.96□□□□□ -0.5
KNOP1-201ENST00000219837 GDAQ9Y2T3 454 aa11.96□□□□□ -0.5
KNOP1-201ENST00000219837 SYNMO15061 1565 aa11.96□□□□□ -0.5
KNOP1-201ENST00000219837 SFI1A8K8P3 1242 aa11.96□□□□□ -0.5
KNOP1-201ENST00000219837 CXCR5P32302 372 aa11.96□□□□□ -0.5
KNOP1-201ENST00000219837 TEX2Q8IWB9 1127 aa11.96□□□□□ -0.5
KNOP1-201ENST00000219837 SLC35F6Q8N357 371 aa11.96□□□□□ -0.5
KNOP1-201ENST00000219837 PPWD1Q96BP3 646 aaKnown RBP11.96□□□□□ -0.5
KNOP1-201ENST00000219837 ANTXR1Q9H6X2 564 aa11.96□□□□□ -0.5
KNOP1-201ENST00000219837 NHEJ1Q9H9Q4 299 aaPredicted RBP11.96□□□□□ -0.5
KNOP1-201ENST00000219837 KRT82Q9NSB4 513 aa11.96□□□□□ -0.5
KNOP1-201ENST00000219837 SERPINB13Q9UIV8 391 aa11.96□□□□□ -0.5
KNOP1-201ENST00000219837 G3BP2Q9UN86 482 aaKnown RBP11.96□□□□□ -0.5
KNOP1-201ENST00000219837 WDR91A4D1P6 747 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 PPARGP37231 505 aaPredicted RBP11.95□□□□□ -0.5
KNOP1-201ENST00000219837 HADHAP40939 763 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 PDCD7Q8N8D1 485 aaKnown RBP11.95□□□□□ -0.5
KNOP1-201ENST00000219837 SNX19Q92543 992 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 PUS7LQ9H0K6 701 aaKnown RBP11.95□□□□□ -0.5
KNOP1-201ENST00000219837 CEP170Q5SW79 1584 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 APOEP02649 317 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 ART3Q13508 389 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 MAN2A1Q16706 1144 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 TTLL6Q8N841 843 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 HAUS4Q9H6D7 363 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 TPX2Q9ULW0 747 aaKnown RBP11.95□□□□□ -0.5
KNOP1-201ENST00000219837 PCDHA13Q9Y5I0 950 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.95□□□□□ -0.5
KNOP1-201ENST00000219837 SERPING1P05155 500 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 IFNAR2P48551 515 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 TRAPPC10P48553 1259 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 GPC3P51654 580 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 PEX3P56589 373 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 DCAF4Q8WV16 495 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 EPB41L5Q9HCM4 733 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 TSR3Q9UJK0 312 aaKnown RBP11.95□□□□□ -0.5
KNOP1-201ENST00000219837 PPP1R9AQ9ULJ8 1098 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 HPCAL4Q9UM19 191 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 PLCG1P19174 1290 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 CRKP46108 304 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 UNC5CLQ8IV45 518 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 PIM2Q9P1W9 311 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 RWDD2AQ9UIY3 292 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 ECE2O60344 883 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 CLTAP09496 248 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 NKX1-1Q15270 411 aaPredicted RBP11.95□□□□□ -0.5
KNOP1-201ENST00000219837 CATSPER4Q7RTX7 472 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 SRRM1Q8IYB3 904 aaKnown RBP11.95□□□□□ -0.5
KNOP1-201ENST00000219837 SLC7A5P2Q9GIP4 190 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 ATP6V0A4Q9HBG4 840 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 EMILIN3Q9NT22 766 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 INTS9Q9NV88 658 aaKnown RBP11.95□□□□□ -0.5
KNOP1-201ENST00000219837 ATP8A1Q9Y2Q0 1164 aa11.95□□□□□ -0.5
KNOP1-201ENST00000219837 ZBBXA8MT70 800 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 F5H423 210 aaPredicted RBP11.94□□□□□ -0.5
KNOP1-201ENST00000219837 HIP1RO75146 1068 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 MT-ND3P03897 115 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 KIAA1755Q5JYT7 1200 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 PDCD6IPQ8WUM4 868 aaKnown RBP11.94□□□□□ -0.5
KNOP1-201ENST00000219837 THAP9Q9H5L6 903 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 ERBB4Q15303 1308 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 PLTPP55058 493 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 SLMAPQ14BN4 828 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 SNCBQ16143 134 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 RBBP7Q16576 425 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 GPT2Q8TD30 523 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 CCHCR1Q8TD31 782 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 ZMYND10O75800 440 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 RASSF3Q86WH2 238 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 ERICH1Q86X53 443 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 STAG1Q8WVM7 1258 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 PIDD1Q9HB75 910 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 XAB2Q9HCS7 855 aaKnown RBP11.94□□□□□ -0.5
KNOP1-201ENST00000219837 DBNLQ9UJU6 430 aaKnown RBP11.94□□□□□ -0.5
KNOP1-201ENST00000219837 DAAM1Q9Y4D1 1078 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 SKIV2LQ15477 1246 aaKnown RBP11.94□□□□□ -0.5
KNOP1-201ENST00000219837 PDCD2Q16342 344 aaPredicted RBP11.94□□□□□ -0.5
KNOP1-201ENST00000219837 SEPT12Q8IYM1 358 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 PRPF38AQ8NAV1 312 aaKnown RBP11.94□□□□□ -0.5
KNOP1-201ENST00000219837 TTC25Q96NG3 672 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 FEM1BQ9UK73 627 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 SNX2O60749 519 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 SUN1O94901 812 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 ZBED1O96006 694 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 JAK3P52333 1124 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 NOP14P78316 857 aaKnown RBP11.94□□□□□ -0.5
KNOP1-201ENST00000219837 TNFAIP2Q03169 654 aa11.94□□□□□ -0.5
KNOP1-201ENST00000219837 MTMR1Q13613 665 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms