RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 EXOC1LA0A1B0GW35 172 aa14.63□□□□□ -0.07
SF3A1-201ENST00000215793 K7ERI5 159 aa14.63□□□□□ -0.07
SF3A1-201ENST00000215793 BZW1Q7L1Q6 419 aaKnown RBP14.63□□□□□ -0.07
SF3A1-201ENST00000215793 ZNF579Q8NAF0 562 aaKnown RBP14.63□□□□□ -0.07
SF3A1-201ENST00000215793 USP17L3A6NCW0 530 aa14.62□□□□□ -0.07
SF3A1-201ENST00000215793 USP17L4A6NCW7 530 aa14.62□□□□□ -0.07
SF3A1-201ENST00000215793 LDHAP00338 332 aaKnown RBP14.62□□□□□ -0.07
SF3A1-201ENST00000215793 HSPA8P11142 646 aaKnown RBP14.62□□□□□ -0.07
SF3A1-201ENST00000215793 THOC5Q13769 683 aaKnown RBP14.62□□□□□ -0.07
SF3A1-201ENST00000215793 SARM1Q6SZW1 724 aa14.62□□□□□ -0.07
SF3A1-201ENST00000215793 UNC13DQ70J99 1090 aa14.62□□□□□ -0.07
SF3A1-201ENST00000215793 USP17L1Q7RTZ2 530 aa14.62□□□□□ -0.07
SF3A1-201ENST00000215793 AIFM3Q96NN9 605 aa14.62□□□□□ -0.07
SF3A1-201ENST00000215793 ZSCAN20P17040 1043 aaPredicted RBP14.62□□□□□ -0.07
SF3A1-201ENST00000215793 DDIT3P35638 169 aa14.62□□□□□ -0.07
SF3A1-201ENST00000215793 UBE2SQ16763 222 aa14.62□□□□□ -0.07
SF3A1-201ENST00000215793 ANKRD20A4Q4UJ75 823 aa14.62□□□□□ -0.07
SF3A1-201ENST00000215793 ANKRD20A8PQ5CZ79 823 aa14.62□□□□□ -0.07
SF3A1-201ENST00000215793 ANKRD20A2Q5SQ80 823 aa14.62□□□□□ -0.07
SF3A1-201ENST00000215793 ANKRD20A1Q5TYW2 823 aa14.62□□□□□ -0.07
SF3A1-201ENST00000215793 SIX6OS1Q8N1H7 587 aa14.62□□□□□ -0.07
SF3A1-201ENST00000215793 PDCD7Q8N8D1 485 aaKnown RBP14.62□□□□□ -0.07
SF3A1-201ENST00000215793 TXLNGQ9NUQ3 528 aa14.62□□□□□ -0.07
SF3A1-201ENST00000215793 DIS3Q9Y2L1 958 aaKnown RBP14.62□□□□□ -0.07
SF3A1-201ENST00000215793 ATP8B3O60423 1300 aa14.62□□□□□ -0.07
SF3A1-201ENST00000215793 CDK12Q9NYV4 1490 aaPredicted RBP14.62□□□□□ -0.07
SF3A1-201ENST00000215793 CYP2D7A0A087X1C5 515 aa14.62□□□□□ -0.07
SF3A1-201ENST00000215793 TTI1O43156 1089 aa14.62□□□□□ -0.07
SF3A1-201ENST00000215793 SMIM24O75264 130 aa14.62□□□□□ -0.07
SF3A1-201ENST00000215793 DYNLT1P63172 113 aa14.62□□□□□ -0.07
SF3A1-201ENST00000215793 RESP18Q5W5W9 173 aa14.62□□□□□ -0.07
SF3A1-201ENST00000215793 DCLK2Q8N568 766 aa14.62□□□□□ -0.07
SF3A1-201ENST00000215793 NUDCD1Q96RS6 583 aa14.62□□□□□ -0.07
SF3A1-201ENST00000215793 QTRT2Q9H974 415 aaKnown RBP14.62□□□□□ -0.07
SF3A1-201ENST00000215793 RCAN1P53805 252 aa14.62□□□□□ -0.07
SF3A1-201ENST00000215793 PDE1CQ14123 709 aaPredicted RBP14.62□□□□□ -0.07
SF3A1-201ENST00000215793 TBC1D10BQ4KMP7 808 aaPredicted RBP14.62□□□□□ -0.07
SF3A1-201ENST00000215793 ZNF449Q6P9G9 518 aa14.62□□□□□ -0.07
SF3A1-201ENST00000215793 CPSF1Q10570 1443 aaKnown RBP14.62□□□□□ -0.07
SF3A1-201ENST00000215793 STK36Q9NRP7 1315 aa14.61□□□□□ -0.07
SF3A1-201ENST00000215793 C6orf118Q5T5N4 469 aa14.61□□□□□ -0.07
SF3A1-201ENST00000215793 MIF4GDA9UHW6 222 aaKnown RBP14.61□□□□□ -0.07
SF3A1-201ENST00000215793 ASNSP08243 561 aa14.61□□□□□ -0.07
SF3A1-201ENST00000215793 PTPN21Q16825 1174 aa14.61□□□□□ -0.07
SF3A1-201ENST00000215793 GLE1Q53GS7 698 aaKnown RBP14.61□□□□□ -0.07
SF3A1-201ENST00000215793 CENPUQ71F23 418 aa14.61□□□□□ -0.07
SF3A1-201ENST00000215793 MYLK4Q86YV6 388 aaPredicted RBP14.61□□□□□ -0.07
SF3A1-201ENST00000215793 PROM2Q8N271 834 aa14.61□□□□□ -0.07
SF3A1-201ENST00000215793 SPDL1Q96EA4 605 aa14.61□□□□□ -0.07
SF3A1-201ENST00000215793 A0A087WUV0 522 aaPredicted RBP14.61□□□□□ -0.07
SF3A1-201ENST00000215793 PODXLO00592 558 aa14.61□□□□□ -0.07
SF3A1-201ENST00000215793 ATP1A3P13637 1013 aa14.61□□□□□ -0.07
SF3A1-201ENST00000215793 NPR1P16066 1061 aa14.61□□□□□ -0.07
SF3A1-201ENST00000215793 NR1D1P20393 614 aa14.61□□□□□ -0.07
SF3A1-201ENST00000215793 ADCY2Q08462 1091 aa14.61□□□□□ -0.07
SF3A1-201ENST00000215793 CASP8Q14790 479 aa14.61□□□□□ -0.07
SF3A1-201ENST00000215793 TCP11Q8WWU5 503 aa14.61□□□□□ -0.07
SF3A1-201ENST00000215793 PPWD1Q96BP3 646 aaKnown RBP14.61□□□□□ -0.07
SF3A1-201ENST00000215793 RPF1Q9H9Y2 349 aaKnown RBP14.61□□□□□ -0.07
SF3A1-201ENST00000215793 RRP15Q9Y3B9 282 aaKnown RBP14.61□□□□□ -0.07
SF3A1-201ENST00000215793 ZMYND12Q9H0C1 365 aa14.61□□□□□ -0.07
SF3A1-201ENST00000215793 TTC37Q6PGP7 1564 aa14.61□□□□□ -0.07
SF3A1-201ENST00000215793 PTCH1Q13635 1447 aa14.6□□□□□ -0.07
SF3A1-201ENST00000215793 CFAP65Q6ZU64 1925 aaKnown RBP14.6□□□□□ -0.07
SF3A1-201ENST00000215793 BBS9Q3SYG4 887 aa14.6□□□□□ -0.07
SF3A1-201ENST00000215793 TMTC4Q5T4D3 741 aa14.6□□□□□ -0.07
SF3A1-201ENST00000215793 DCAF4Q8WV16 495 aa14.6□□□□□ -0.07
SF3A1-201ENST00000215793 PIGBQ92521 554 aa14.6□□□□□ -0.07
SF3A1-201ENST00000215793 ACTR5Q9H9F9 607 aaPredicted RBP14.6□□□□□ -0.07
SF3A1-201ENST00000215793 WDR19Q8NEZ3 1342 aa14.6□□□□□ -0.07
SF3A1-201ENST00000215793 ZBED1O96006 694 aa14.6□□□□□ -0.07
SF3A1-201ENST00000215793 SETSIPP0DME0 302 aa14.6□□□□□ -0.07
SF3A1-201ENST00000215793 CD58P19256 250 aa14.6□□□□□ -0.07
SF3A1-201ENST00000215793 JAK3P52333 1124 aa14.6□□□□□ -0.07
SF3A1-201ENST00000215793 ADCY1Q08828 1119 aa14.6□□□□□ -0.07
SF3A1-201ENST00000215793 RC3H1Q5TC82 1133 aaKnown RBP14.6□□□□□ -0.07
SF3A1-201ENST00000215793 MSTO1Q9BUK6 570 aa14.6□□□□□ -0.07
SF3A1-201ENST00000215793 DRC3Q9H069 523 aa14.6□□□□□ -0.07
SF3A1-201ENST00000215793 NOVA2Q9UNW9 492 aaKnown RBP14.6□□□□□ -0.07
SF3A1-201ENST00000215793 EIF2AK2P19525 551 aaKnown RBP14.6□□□□□ -0.07
SF3A1-201ENST00000215793 MCAMP43121 646 aa14.6□□□□□ -0.07
SF3A1-201ENST00000215793 CALR3Q96L12 384 aaKnown RBP14.6□□□□□ -0.07
SF3A1-201ENST00000215793 KIAA1586Q9HCI6 787 aa14.6□□□□□ -0.07
SF3A1-201ENST00000215793 IQANK1A0A1B0GTG1 560 aa14.6□□□□□ -0.07
SF3A1-201ENST00000215793 SPECC1L-ADORA2AF8WAN1 911 aa14.6□□□□□ -0.07
SF3A1-201ENST00000215793 SLCO1A2P46721 670 aa14.6□□□□□ -0.07
SF3A1-201ENST00000215793 CLCN6P51797 869 aa14.6□□□□□ -0.07
SF3A1-201ENST00000215793 TSTA3Q13630 321 aaPredicted RBP14.6□□□□□ -0.07
SF3A1-201ENST00000215793 ARL13BQ3SXY8 428 aa14.6□□□□□ -0.07
SF3A1-201ENST00000215793 SUSD4Q5VX71 490 aa14.6□□□□□ -0.07
SF3A1-201ENST00000215793 ERICH1Q86X53 443 aa14.6□□□□□ -0.07
SF3A1-201ENST00000215793 MCPH1Q8NEM0 835 aa14.6□□□□□ -0.07
SF3A1-201ENST00000215793 PLEKHA8P1O95397 391 aa14.59□□□□□ -0.07
SF3A1-201ENST00000215793 CA4P22748 312 aa14.59□□□□□ -0.07
SF3A1-201ENST00000215793 LLGL1Q15334 1064 aa14.59□□□□□ -0.07
SF3A1-201ENST00000215793 PYROXD1Q8WU10 500 aa14.59□□□□□ -0.07
SF3A1-201ENST00000215793 LRFN2Q9ULH4 789 aa14.59□□□□□ -0.07
SF3A1-201ENST00000215793 ADGBQ8N7X0 1667 aa14.59□□□□□ -0.07
SF3A1-201ENST00000215793 NPHP4O75161 1426 aaPredicted RBP14.59□□□□□ -0.07
SF3A1-201ENST00000215793 DNAJC8O75937 253 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms