RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Sertad2Q9JJG5 309 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Trim10Q9WUH5 489 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Pex11aQ9Z211 246 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Mical3Q8CJ19 1993 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 A0A286YCQ6 122 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Eif3dO70194 548 aaKnown RBP11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 ArP19091 899 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Hoxc13P50207 328 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Wdr70Q3TWF6 657 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Psmd1Q3TXS7 953 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Lgr6Q3UVD5 967 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Znf354cQ571J5 560 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Pank4Q80YV4 820 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Snip1Q8BIZ6 383 aaKnown RBP11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Yars2Q8BYL4 472 aaKnown RBP11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Nemp2Q8CB65 421 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Bcas3Q8CCN5 928 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Krt222Q8CCX5 294 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 CbsQ91WT9 561 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 2310002L09RikQ9D7L5 217 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Fyb2A2A995 729 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Gm15448F6PZL4 682 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Gfpt1P47856 697 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Tcerg1lQ3B807 590 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 MmeQ61391 750 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Epha7Q61772 998 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Six2Q62232 296 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Krt9Q6RHW0 743 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Krit1Q6S5J6 736 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Fbxo10Q7TQF2 950 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Ccdc93Q7TQK5 629 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Ddx10Q80Y44 875 aaKnown RBP11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Gprasp2Q8BUY8 826 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Trim47Q8C0E3 641 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Leng8Q8CBY3 785 aaKnown RBP11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Phf20l1Q8CCJ9 1013 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Kcnv2Q8CFS6 562 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Appl2Q8K3G9 662 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Dusp19Q8K4T5 220 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Tmem132aQ922P8 1018 aa11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Syf2Q9D198 242 aaKnown RBP11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Nol7Q9D7Z3 254 aaKnown RBP11.17□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Lmod3E9QA62 571 aa11.16□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 MybP06876 636 aa11.16□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Wnt10bP48614 389 aa11.16□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Tnnt2P50752 301 aa11.16□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Traf5P70191 558 aa11.16□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Gjb6P70689 261 aa11.16□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Stim2P83093 746 aa11.16□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Gas8Q60779 478 aa11.16□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Ezh2Q61188 746 aaKnown RBP11.16□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Mapk6Q61532 720 aa11.16□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Actn1Q7TPR4 892 aaKnown RBP11.16□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Q91Z58 1206 aa11.16□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Spdl1Q923A2 608 aa11.16□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Tdrd1Q99MV1 1172 aa11.16□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Tgm5Q9D7I9 724 aa11.16□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Arhgef7Q9ES28 862 aa11.16□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Tjp3Q9QXY1 905 aa11.16□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Mrvi1Q9WUX5 899 aaKnown RBP11.16□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Megf6Q80V70 1572 aa11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Exoc3l2D3YUP5 789 aa11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Rgs22G3UYX5 1258 aa11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Kif3cO35066 796 aa11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Nmt1O70310 496 aaKnown RBP11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Tcp1P11983 556 aaKnown RBP11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 D1Pas1P16381 660 aa11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Rpl13P47963 211 aaKnown RBP11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Gad1P48318 593 aa11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Erbb2P70424 1256 aa11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Irx2P81066 474 aa11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Fgfr4Q03142 799 aa11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Dpcr1Q3TNW5 500 aa11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Ankrd13cQ3UX43 541 aa11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Gas7Q60780 421 aa11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Tfe3Q64092 572 aaKnown RBP11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Ccpg1Q640L3 753 aa11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Hdac10Q6P3E7 666 aa11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 E2f7Q6S7F2 904 aa11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Cyp26b1Q811W2 512 aa11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Gpt2Q8BGT5 522 aa11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 SucoQ8C341 1250 aa11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Fam20aQ8CID3 541 aa11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Slc4a8Q8JZR6 1089 aa11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Mmgt1Q8K273 131 aaKnown RBP11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Ndfip2Q91ZP6 311 aa11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 SetQ9EQU5 289 aaKnown RBP11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Sh2b2Q9JID9 621 aa11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 NrapQ80XB4 1728 aa11.15□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Mageb2A2AHM0 380 aa11.15□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Klhdc7aA2APT9 773 aa11.15□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Tnfrsf11aO35305 625 aa11.15□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Cd68P31996 326 aa11.15□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Rnf216P58283 853 aa11.15□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Rit2P70425 217 aa11.15□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Rbm46P86049 533 aa11.15□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Anp32eP97822 260 aaKnown RBP11.15□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Trim43aQ3TL54 445 aa11.15□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Ccdc84Q4VA36 332 aaKnown RBP11.15□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Krt31Q61765 416 aa11.15□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms