RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Neurl1bQ0MW30 546 aa16.73■□□□□ 0.27
Upf1-202ENSMUST00000215817 Mettl14Q3UIK4 456 aa16.73■□□□□ 0.27
Upf1-202ENSMUST00000215817 Gm5169Q5M8P2 212 aa16.73■□□□□ 0.27
Upf1-202ENSMUST00000215817 Tbx18Q9EPZ6 613 aa16.73■□□□□ 0.27
Upf1-202ENSMUST00000215817 Irf5P56477 497 aa16.73■□□□□ 0.27
Upf1-202ENSMUST00000215817 Q3TTJ4 293 aa16.73■□□□□ 0.27
Upf1-202ENSMUST00000215817 Hspa4Q61316 841 aa16.73■□□□□ 0.27
Upf1-202ENSMUST00000215817 Jade3Q6IE82 823 aa16.73■□□□□ 0.27
Upf1-202ENSMUST00000215817 Stxbp5Q8K400 1152 aaKnown RBP16.73■□□□□ 0.27
Upf1-202ENSMUST00000215817 Nmt1O70310 496 aaKnown RBP16.73■□□□□ 0.27
Upf1-202ENSMUST00000215817 Tspyl3Q3UYP3 334 aa16.73■□□□□ 0.27
Upf1-202ENSMUST00000215817 Zbtb8osQ505B7 168 aa16.73■□□□□ 0.27
Upf1-202ENSMUST00000215817 Cracr2bQ80ZJ8 394 aa16.73■□□□□ 0.27
Upf1-202ENSMUST00000215817 Lcmt1A0A0U1RNF2 332 aa16.72■□□□□ 0.27
Upf1-202ENSMUST00000215817 Gm10110D3Z5M2 615 aa16.72■□□□□ 0.27
Upf1-202ENSMUST00000215817 Timm44O35857 452 aa16.72■□□□□ 0.27
Upf1-202ENSMUST00000215817 PrkceP16054 737 aa16.72■□□□□ 0.27
Upf1-202ENSMUST00000215817 RimklbQ80WS1 387 aa16.72■□□□□ 0.27
Upf1-202ENSMUST00000215817 FtoQ8BGW1 502 aa16.72■□□□□ 0.27
Upf1-202ENSMUST00000215817 Kiaa0391Q8JZY4 584 aaKnown RBP16.72■□□□□ 0.27
Upf1-202ENSMUST00000215817 Slc25a38Q91XD8 326 aa16.72■□□□□ 0.27
Upf1-202ENSMUST00000215817 Slc4a9E9PUP3 929 aa16.72■□□□□ 0.27
Upf1-202ENSMUST00000215817 Gm10134F6ZQC6 126 aa16.72■□□□□ 0.27
Upf1-202ENSMUST00000215817 Got1P05201 413 aa16.72■□□□□ 0.27
Upf1-202ENSMUST00000215817 Acot6Q32Q92 419 aa16.72■□□□□ 0.27
Upf1-202ENSMUST00000215817 Slain1Q68FF7 579 aa16.72■□□□□ 0.27
Upf1-202ENSMUST00000215817 Znf618Q80YY7 953 aaKnown RBP16.72■□□□□ 0.27
Upf1-202ENSMUST00000215817 Nemp2Q8CB65 421 aa16.72■□□□□ 0.27
Upf1-202ENSMUST00000215817 MajinQ9D992 256 aa16.72■□□□□ 0.27
Upf1-202ENSMUST00000215817 Magi2Q9WVQ1 1275 aa16.72■□□□□ 0.27
Upf1-202ENSMUST00000215817 Nedd1P33215 660 aa16.72■□□□□ 0.27
Upf1-202ENSMUST00000215817 ClasrpQ8CFC7 668 aa16.72■□□□□ 0.27
Upf1-202ENSMUST00000215817 Nek9Q8K1R7 984 aa16.72■□□□□ 0.27
Upf1-202ENSMUST00000215817 Fuca2Q99KR8 461 aa16.72■□□□□ 0.27
Upf1-202ENSMUST00000215817 Kansl3A2RSY1 903 aaKnown RBP16.71■□□□□ 0.27
Upf1-202ENSMUST00000215817 Vmn2r79E9Q067 851 aa16.71■□□□□ 0.27
Upf1-202ENSMUST00000215817 GssP51855 474 aa16.71■□□□□ 0.27
Upf1-202ENSMUST00000215817 Actr2P61161 394 aa16.71■□□□□ 0.27
Upf1-202ENSMUST00000215817 GabpaQ00422 454 aa16.71■□□□□ 0.27
Upf1-202ENSMUST00000215817 Mark3Q03141 753 aa16.71■□□□□ 0.27
Upf1-202ENSMUST00000215817 Gbp4Q61107 620 aa16.71■□□□□ 0.27
Upf1-202ENSMUST00000215817 Zfp397Q7TNK4 527 aa16.71■□□□□ 0.27
Upf1-202ENSMUST00000215817 MyripQ8K3I4 856 aa16.71■□□□□ 0.27
Upf1-202ENSMUST00000215817 Ces4aQ8R0W5 563 aa16.71■□□□□ 0.27
Upf1-202ENSMUST00000215817 Copb1Q9JIF7 953 aa16.71■□□□□ 0.27
Upf1-202ENSMUST00000215817 Skint3A7TZF0 458 aa16.71■□□□□ 0.27
Upf1-202ENSMUST00000215817 Gimap9G3X987 291 aa16.71■□□□□ 0.27
Upf1-202ENSMUST00000215817 Arhgef19Q8BWA8 802 aa16.71■□□□□ 0.27
Upf1-202ENSMUST00000215817 MbipQ99LQ1 341 aa16.71■□□□□ 0.27
Upf1-202ENSMUST00000215817 Arl14Q3SXC5 192 aa16.71■□□□□ 0.27
Upf1-202ENSMUST00000215817 Miga1Q4QQM5 600 aa16.71■□□□□ 0.27
Upf1-202ENSMUST00000215817 Rsad1Q5SUV1 442 aa16.71■□□□□ 0.27
Upf1-202ENSMUST00000215817 Rpap3Q9D706 660 aa16.71■□□□□ 0.27
Upf1-202ENSMUST00000215817 Tekt1Q9DAJ2 418 aa16.71■□□□□ 0.27
Upf1-202ENSMUST00000215817 IydQ9DCX8 285 aa16.71■□□□□ 0.27
Upf1-202ENSMUST00000215817 Tp53i13Q5F267 385 aa16.71■□□□□ 0.26
Upf1-202ENSMUST00000215817 Cnnm4Q69ZF7 771 aa16.71■□□□□ 0.26
Upf1-202ENSMUST00000215817 Nudt16Q6P3D0 195 aa16.71■□□□□ 0.26
Upf1-202ENSMUST00000215817 Add1Q9QYC0 735 aaKnown RBP16.71■□□□□ 0.26
Upf1-202ENSMUST00000215817 Veph1A1A535 833 aa16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 Tmigd3G3X8R9 209 aa16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 Ccdc84Q4VA36 332 aaKnown RBP16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 Srrm1Q52KI8 946 aaKnown RBP16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 Trub2Q91WG3 331 aaKnown RBP16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 Noxred1Q9D3S5 366 aa16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 Pdzd4Q9QY39 772 aa16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 Aimp1P31230 310 aaKnown RBP16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 Rit2P70425 217 aa16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 4933427I04RikQ3V053 235 aa16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 Foxn3Q499D0 457 aa16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 Adamts18Q4VC17 1219 aa16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 Nucks1Q80XU3 234 aaKnown RBP16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 Ipo5Q8BKC5 1097 aaKnown RBP16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 RadxQ8C779 850 aa16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 Ttc27Q8CD92 847 aa16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 Ccdc73Q8CDM4 1066 aa16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 Wrap53Q8VC51 532 aa16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 Eya4Q9Z191 616 aa16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 Exoc4O35382 975 aa16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 Nfe2Q07279 373 aa16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 Sval3Q76I99 144 aa16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 6820408C15RikQ8BJX2 354 aa16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 Fndc3aQ8BX90 1198 aa16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 Trim9Q8C7M3 817 aa16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 Washc1Q8VDD8 475 aa16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 Atp1a1Q8VDN2 1023 aaKnown RBP16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 1700020D05RikQ99PB1 294 aa16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 Stx17Q9D0I4 301 aa16.7■□□□□ 0.26
Upf1-202ENSMUST00000215817 Ube3aO08759 870 aa16.69■□□□□ 0.26
Upf1-202ENSMUST00000215817 GclmO09172 274 aaKnown RBP16.69■□□□□ 0.26
Upf1-202ENSMUST00000215817 LtkP08923 888 aa16.69■□□□□ 0.26
Upf1-202ENSMUST00000215817 Gna14P30677 355 aa16.69■□□□□ 0.26
Upf1-202ENSMUST00000215817 Olfm4Q3UZZ4 505 aa16.69■□□□□ 0.26
Upf1-202ENSMUST00000215817 Sh2d1b2Q45HK4 132 aa16.69■□□□□ 0.26
Upf1-202ENSMUST00000215817 Arhgap10Q6Y5D8 786 aa16.69■□□□□ 0.26
Upf1-202ENSMUST00000215817 Senp7Q8BUH8 1037 aa16.69■□□□□ 0.26
Upf1-202ENSMUST00000215817 Vps37cQ8R105 352 aa16.69■□□□□ 0.26
Upf1-202ENSMUST00000215817 Gle1Q8R322 699 aa16.69■□□□□ 0.26
Upf1-202ENSMUST00000215817 Smc1aQ9CU62 1233 aaKnown RBP16.69■□□□□ 0.26
Upf1-202ENSMUST00000215817 Abcb11Q9QY30 1321 aa16.69■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms