RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Add1Q9QYC0 735 aaKnown RBP14.67□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Magea4F2Z493 315 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Traf5P70191 558 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Tcp11Q01755 566 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 YdjcQ14BV6 310 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Smyd5Q3TYX3 416 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Vwa3aQ3UVV9 1148 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Pls1Q3V0K9 630 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Gm11437Q5QR91 290 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Shc3Q61120 474 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Asic3Q6X1Y6 530 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Chtf18Q8BIW9 969 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Lman1lQ8VCD3 505 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Bzw2Q91VK1 419 aaKnown RBP14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Tdrd3Q91W18 743 aaKnown RBP14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 EpgnQ924X1 152 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Npm3Q9CPP0 175 aaKnown RBP14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Cntn6Q9JMB8 1028 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Extl3Q9WVL6 918 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Golgb1E9PVZ8 3238 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 NrapQ80XB4 1728 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Skint3A7TZF0 458 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Ppp1r9aH3BJD6 1292 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Actn3O88990 900 aaKnown RBP14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Tp53P02340 387 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 ArP19091 899 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Top1Q04750 767 aaKnown RBP14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Zc3h18Q0P678 948 aaKnown RBP14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Edem3Q2HXL6 931 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 AlcamQ61490 583 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 NntQ61941 1086 aaKnown RBP14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Ccpg1Q640L3 753 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Ptrh1Q8BW00 204 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Trappc12Q8K2L8 797 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Tmem132aQ922P8 1018 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Rassf3Q99P51 232 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Mageb16Q9CWV4 363 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Tmx2Q9D710 295 aaKnown RBP14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Ppil2Q9D787 521 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Phtf1Q9QZ09 761 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Pex11aQ9Z211 246 aa14.66□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Taf4bG5E8Z2 855 aa14.65□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Has3O08650 554 aa14.65□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Exoc4O35382 975 aa14.65□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Cbx1P83917 185 aaKnown RBP14.65□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Fgfr4Q03142 799 aa14.65□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Tcerg1lQ3B807 590 aa14.65□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Scarf1Q5ND28 820 aa14.65□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Cacna2d4Q5RJF7 1116 aa14.65□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Msantd2Q6NZR2 559 aa14.65□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Q6PD19 689 aa14.65□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Fbxo10Q7TQF2 950 aa14.65□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Tbc1d22bQ80VE5 505 aa14.65□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Btnl9Q8BJE2 536 aa14.65□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 NkrfQ8BY02 690 aaKnown RBP14.65□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Sash3Q8K352 380 aa14.65□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Prpf6Q91YR7 941 aaKnown RBP14.65□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 AdarQ99MU3 1178 aaKnown RBP14.65□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 SerhlQ9EPB5 311 aa14.65□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Prpf40aQ9R1C7 953 aaKnown RBP14.65□□□□□ -0.06
Pdlim5-208ENSMUST00000196220 Klrk1O54709 232 aa14.64□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Tal1P22091 329 aa14.64□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Kif2aP28740 705 aa14.64□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Cct6aP80317 531 aaKnown RBP14.64□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Meis3P97368 378 aa14.64□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Grik5Q61626 979 aa14.64□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Dhx37Q6NZL1 1150 aa14.64□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Drc7Q6V3W6 876 aa14.64□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Fmnl3Q6ZPF4 1028 aa14.64□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 SucoQ8C341 1250 aa14.64□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Prl7b1Q8CGZ9 251 aa14.64□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Ulbp1Q8HWA3 334 aa14.64□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Med24Q99K74 987 aa14.64□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Ccdc43Q9CR29 222 aaKnown RBP14.64□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 PdclQ9DBX2 301 aa14.64□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Ercc4Q9QZD4 917 aa14.64□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Akap2O54931 893 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Men1O88559 611 aaKnown RBP14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Idh1O88844 414 aaKnown RBP14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Cyp11b2P15539 500 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Pth1rP41593 591 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Irf6P97431 467 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Atp8b1Q148W0 1251 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Zc3h15Q3TIV5 426 aaKnown RBP14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 ItpripQ3TNL8 555 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 ItgadQ3V0T4 1168 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Tmem232Q5K6N0 675 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Fbxo41Q6NS60 873 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 DnerQ8JZM4 737 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 CbsQ91WT9 561 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 1700020D05RikQ99PB1 294 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Mzb1Q9D8I1 188 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Kcnh7Q9ER47 1195 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Gm38392E9Q2A2 434 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Gm10436L7N1Y3 520 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Dhx15O35286 795 aaKnown RBP14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Ap1b1O35643 943 aaKnown RBP14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Itgb5O70309 798 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 P4hbP09103 509 aaKnown RBP14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Serpinc1P32261 465 aa14.63□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 54.5 ms