RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Dppa3Q8QZY3 150 aa20.1■□□□□ 0.81
Trim47-202ENSMUST00000106441 Gmcl1Q920G9 524 aa20.1■□□□□ 0.81
Trim47-202ENSMUST00000106441 Bcs1lQ9CZP5 418 aa20.1■□□□□ 0.81
Trim47-202ENSMUST00000106441 Fam122aQ9DB52 284 aa20.1■□□□□ 0.81
Trim47-202ENSMUST00000106441 Irx5Q9JKQ4 484 aa20.1■□□□□ 0.81
Trim47-202ENSMUST00000106441 Nfu1Q9QZ23 255 aa20.1■□□□□ 0.81
Trim47-202ENSMUST00000106441 Gm45208A0A140LJ36 292 aa20.09■□□□□ 0.81
Trim47-202ENSMUST00000106441 MybP06876 636 aa20.09■□□□□ 0.81
Trim47-202ENSMUST00000106441 Surf6P70279 355 aaKnown RBP20.09■□□□□ 0.81
Trim47-202ENSMUST00000106441 Krt87Q6IMF0 495 aa20.09■□□□□ 0.81
Trim47-202ENSMUST00000106441 RragaQ80X95 313 aa20.09■□□□□ 0.81
Trim47-202ENSMUST00000106441 Armcx3Q8BHS6 379 aa20.09■□□□□ 0.81
Trim47-202ENSMUST00000106441 Fam83aQ8K2P2 436 aa20.09■□□□□ 0.81
Trim47-202ENSMUST00000106441 Kbtbd4Q8R179 534 aa20.09■□□□□ 0.81
Trim47-202ENSMUST00000106441 Map7d1A2AJI0 846 aa20.08■□□□□ 0.81
Trim47-202ENSMUST00000106441 Odf2A3KGV1 830 aaKnown RBP20.08■□□□□ 0.81
Trim47-202ENSMUST00000106441 Lig1P37913 916 aa20.08■□□□□ 0.81
Trim47-202ENSMUST00000106441 Stat4P42228 749 aa20.08■□□□□ 0.81
Trim47-202ENSMUST00000106441 Sfi1Q3UZY0 1216 aaKnown RBP20.08■□□□□ 0.81
Trim47-202ENSMUST00000106441 Sco1Q5SUC9 284 aa20.08■□□□□ 0.81
Trim47-202ENSMUST00000106441 Ccdc189Q6NZQ0 333 aa20.08■□□□□ 0.81
Trim47-202ENSMUST00000106441 Cnksr2Q80YA9 1032 aa20.08■□□□□ 0.81
Trim47-202ENSMUST00000106441 Kctd10Q922M3 315 aa20.08■□□□□ 0.81
Trim47-202ENSMUST00000106441 Ubxn1Q922Y1 297 aa20.08■□□□□ 0.81
Trim47-202ENSMUST00000106441 Smco2Q9DA21 347 aa20.08■□□□□ 0.81
Trim47-202ENSMUST00000106441 Gm5114W4VSN8 858 aa20.08■□□□□ 0.81
Trim47-202ENSMUST00000106441 Rsbn1lD3Z0K6 821 aa20.08■□□□□ 0.8
Trim47-202ENSMUST00000106441 Ankrd35E9Q9D8 996 aa20.08■□□□□ 0.8
Trim47-202ENSMUST00000106441 Senp1P59110 640 aa20.08■□□□□ 0.8
Trim47-202ENSMUST00000106441 Dnajc19Q9CQV7 116 aa20.08■□□□□ 0.8
Trim47-202ENSMUST00000106441 Rwdd2aQ9D9S3 292 aa20.08■□□□□ 0.8
Trim47-202ENSMUST00000106441 Prg3Q9JL95 222 aa20.08■□□□□ 0.8
Trim47-202ENSMUST00000106441 Wee1P47810 646 aa20.07■□□□□ 0.8
Trim47-202ENSMUST00000106441 Otud5Q3U2S4 566 aa20.07■□□□□ 0.8
Trim47-202ENSMUST00000106441 Ttbk2Q3UVR3 1243 aa20.07■□□□□ 0.8
Trim47-202ENSMUST00000106441 Igdcc3Q8BQC3 813 aa20.07■□□□□ 0.8
Trim47-202ENSMUST00000106441 Vcpip1Q8CDG3 1220 aa20.07■□□□□ 0.8
Trim47-202ENSMUST00000106441 Calcoco1Q8CGU1 691 aa20.07■□□□□ 0.8
Trim47-202ENSMUST00000106441 Bst2Q8R2Q8 172 aa20.07■□□□□ 0.8
Trim47-202ENSMUST00000106441 Msantd4Q91YU3 345 aa20.07■□□□□ 0.8
Trim47-202ENSMUST00000106441 Luc7lQ9CYI4 371 aaKnown RBP20.07■□□□□ 0.8
Trim47-202ENSMUST00000106441 Krt34Q9D646 392 aa20.07■□□□□ 0.8
Trim47-202ENSMUST00000106441 Lztfl1Q9JHQ5 299 aa20.07■□□□□ 0.8
Trim47-202ENSMUST00000106441 Sh2b2Q9JID9 621 aa20.07■□□□□ 0.8
Trim47-202ENSMUST00000106441 Col11a1Q61245 1804 aa20.07■□□□□ 0.8
Trim47-202ENSMUST00000106441 Thsd7bQ6P4U0 1607 aa20.07■□□□□ 0.8
Trim47-202ENSMUST00000106441 Apol6B7ZC55 329 aa20.07■□□□□ 0.8
Trim47-202ENSMUST00000106441 Prl2c2P04095 224 aa20.07■□□□□ 0.8
Trim47-202ENSMUST00000106441 Sec31aQ3UPL0 1230 aaKnown RBP20.07■□□□□ 0.8
Trim47-202ENSMUST00000106441 Rasa3Q60790 834 aa20.07■□□□□ 0.8
Trim47-202ENSMUST00000106441 Lrrcc1Q69ZB0 1026 aa20.07■□□□□ 0.8
Trim47-202ENSMUST00000106441 Dcaf15Q6PFH3 600 aa20.07■□□□□ 0.8
Trim47-202ENSMUST00000106441 Six6os1Q9CTN5 574 aa20.07■□□□□ 0.8
Trim47-202ENSMUST00000106441 Ccdc105Q9D4K7 499 aa20.07■□□□□ 0.8
Trim47-202ENSMUST00000106441 Usp14Q9JMA1 493 aaKnown RBP20.07■□□□□ 0.8
Trim47-202ENSMUST00000106441 Nlrp5Q9R1M5 1163 aa20.07■□□□□ 0.8
Trim47-202ENSMUST00000106441 Gm44503E9PYU5 387 aa20.06■□□□□ 0.8
Trim47-202ENSMUST00000106441 HmmrQ00547 794 aaKnown RBP20.06■□□□□ 0.8
Trim47-202ENSMUST00000106441 Skap1Q3UUV5 355 aa20.06■□□□□ 0.8
Trim47-202ENSMUST00000106441 Bbof1Q3V079 533 aa20.06■□□□□ 0.8
Trim47-202ENSMUST00000106441 Carmil2Q3V3V9 1296 aa20.06■□□□□ 0.8
Trim47-202ENSMUST00000106441 Sh3gl2Q62420 352 aa20.06■□□□□ 0.8
Trim47-202ENSMUST00000106441 Sp4Q62445 782 aa20.06■□□□□ 0.8
Trim47-202ENSMUST00000106441 Vmn1r199Q8R280 367 aa20.06■□□□□ 0.8
Trim47-202ENSMUST00000106441 Ero1bQ8R2E9 467 aa20.06■□□□□ 0.8
Trim47-202ENSMUST00000106441 Defb15Q8R2I5 79 aa20.06■□□□□ 0.8
Trim47-202ENSMUST00000106441 Mettl16Q9CQG2 553 aaKnown RBP20.06■□□□□ 0.8
Trim47-202ENSMUST00000106441 4931423N10RikQ9D4J9 382 aa20.06■□□□□ 0.8
Trim47-202ENSMUST00000106441 Sept3Q9Z1S5 350 aa20.06■□□□□ 0.8
Trim47-202ENSMUST00000106441 Gm4985A2ALC6 410 aa20.05■□□□□ 0.8
Trim47-202ENSMUST00000106441 Mms22lB1AUR6 1238 aa20.05■□□□□ 0.8
Trim47-202ENSMUST00000106441 Ddx3xQ62167 662 aaKnown RBP20.05■□□□□ 0.8
Trim47-202ENSMUST00000106441 Srrm3Q80WV7 648 aa20.05■□□□□ 0.8
Trim47-202ENSMUST00000106441 Rfc4Q99J62 364 aa20.05■□□□□ 0.8
Trim47-202ENSMUST00000106441 AacsQ9D2R0 672 aa20.05■□□□□ 0.8
Trim47-202ENSMUST00000106441 AvenQ9D9K3 342 aa20.05■□□□□ 0.8
Trim47-202ENSMUST00000106441 Brca1P48754 1812 aa20.05■□□□□ 0.8
Trim47-202ENSMUST00000106441 Gm7168A0AUV4 508 aa20.05■□□□□ 0.8
Trim47-202ENSMUST00000106441 Lilrb3P97484 841 aa20.05■□□□□ 0.8
Trim47-202ENSMUST00000106441 Gm5169Q5M8P2 212 aa20.05■□□□□ 0.8
Trim47-202ENSMUST00000106441 Gas8Q60779 478 aa20.05■□□□□ 0.8
Trim47-202ENSMUST00000106441 Trpc6Q61143 930 aa20.05■□□□□ 0.8
Trim47-202ENSMUST00000106441 Ankrd24Q80VM7 985 aa20.05■□□□□ 0.8
Trim47-202ENSMUST00000106441 Cc2d1bQ8BRN9 848 aa20.05■□□□□ 0.8
Trim47-202ENSMUST00000106441 Traf3ip3Q8C0G2 513 aa20.05■□□□□ 0.8
Trim47-202ENSMUST00000106441 Lca5lQ8C0X0 741 aa20.05■□□□□ 0.8
Trim47-202ENSMUST00000106441 Zfp446Q8C9M8 523 aa20.05■□□□□ 0.8
Trim47-202ENSMUST00000106441 Il31raQ8K5B1 716 aa20.05■□□□□ 0.8
Trim47-202ENSMUST00000106441 Haus2Q9CQS9 234 aa20.05■□□□□ 0.8
Trim47-202ENSMUST00000106441 Inpp4aQ9EPW0 939 aa20.05■□□□□ 0.8
Trim47-202ENSMUST00000106441 C2cd2E9Q3C1 696 aa20.04■□□□□ 0.8
Trim47-202ENSMUST00000106441 Oog1E9Q5G7 496 aa20.04■□□□□ 0.8
Trim47-202ENSMUST00000106441 Mx1P09922 631 aa20.04■□□□□ 0.8
Trim47-202ENSMUST00000106441 Nap1l1P28656 391 aaKnown RBP20.04■□□□□ 0.8
Trim47-202ENSMUST00000106441 Arl14Q3SXC5 192 aa20.04■□□□□ 0.8
Trim47-202ENSMUST00000106441 Shc3Q61120 474 aa20.04■□□□□ 0.8
Trim47-202ENSMUST00000106441 Clca4aQ6Q473 924 aa20.04■□□□□ 0.8
Trim47-202ENSMUST00000106441 Usp17leQ7M764 540 aa20.04■□□□□ 0.8
Trim47-202ENSMUST00000106441 Slc4a7Q8BTY2 1034 aa20.04■□□□□ 0.8
Trim47-202ENSMUST00000106441 H6pdQ8CFX1 789 aa20.04■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms