RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Tspan17Q9D7W4 270 aa17■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Sema3fO88632 785 aa16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Rasgrf1P27671 1262 aa16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Adssl1P28650 457 aa16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Nlrp4cQ3TKR3 982 aa16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Madcam1Q61826 405 aa16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Trim17Q7TPM3 477 aa16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Snip1Q8BIZ6 383 aaKnown RBP16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Rbbp5Q8BX09 538 aaKnown RBP16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Zfp317Q8C0Q5 607 aa16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Syne4Q8CII8 388 aa16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Setd3Q91WC0 594 aa16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Aco1P28271 889 aaKnown RBP16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Ccdc85aQ5SP85 500 aa16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Zcchc17Q9ESX4 241 aaKnown RBP16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Psmg1Q9JK23 289 aa16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 4930407I10RikD3Z5T8 1512 aa16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Arhgef26D3YYY8 869 aa16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Xbp1O35426 267 aa16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 C1qbpO35658 278 aa16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Stat4P42228 749 aa16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Cep126Q0VBV7 1103 aa16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 HarsQ61035 509 aa16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Nlrp9bQ66X22 1003 aa16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Rpf1Q7TND5 349 aaKnown RBP16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 AmphQ7TQF7 686 aa16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 EngaseQ8BX80 734 aa16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Dppa3Q8QZY3 150 aa16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Bcs1lQ9CZP5 418 aa16.99■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Gm6588E9Q3K0 461 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 L3mbtl3Q8BLB7 883 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Klhl38Q8BSF5 581 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Gga1Q8R0H9 635 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Hps3Q91VB4 1002 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 YwhagP61982 247 aaKnown RBP16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Fbxo44Q8BK26 255 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Usp15Q8R5H1 981 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Dtnbp1Q91WZ8 352 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Basp1Q91XV3 226 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 1700016D06RikQ9DAA5 166 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Rnf6Q9DBU5 667 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Acad12D3Z7X0 555 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Fam81aQ3UXZ6 364 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Rabep2Q91WG2 554 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Coa7Q921H9 231 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Rpa3Q9CQ71 121 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Ndst4Q9EQW8 872 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Bub1bQ9Z1S0 1052 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Rbm46P86049 533 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Kctd16Q5DTY9 427 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Gucy2fQ5SDA5 1108 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Stxbp2Q64324 593 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Impg2Q80XH2 1243 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Creb3l3Q91XE9 479 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Arl2bpQ9D385 163 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Ccdc182Q9D9C6 152 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Dnajb7Q9QYI8 312 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Abcc10Q8R4P9 1501 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Gm9774A0A0A6YVU8 407 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Supt3B0QZW4 406 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Nova2D3YVV7 556 aaKnown RBP16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Mmp14P53690 582 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Fam161bQ8CB59 589 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Nkiras1Q8CEC5 192 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Eif4enif1Q9EST3 983 aaKnown RBP16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Sgk1Q9WVC6 431 aa16.98■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Sparcl1P70663 650 aa16.97■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Asprv1Q09PK2 339 aa16.97■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Vmn1r209Q5NC97 312 aa16.97■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Fbxo41Q6NS60 873 aa16.97■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Phf20l1Q8CCJ9 1013 aa16.97■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Ltb4r2Q9JJL9 360 aa16.97■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Ccne2Q9Z238 404 aa16.97■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Eif2ak1Q9Z2R9 619 aa16.97■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Gm28042B7ZCM9 1014 aa16.97■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Ms4a2P20490 235 aa16.97■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Kcnma1Q08460 1209 aa16.97■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Klhl14Q69ZK5 630 aa16.97■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Fbxo18Q8K2I9 1042 aa16.97■□□□□ 0.31
Clcn3-203ENSMUST00000093490 DccP70211 1447 aa16.97■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Rabgap1A2AWA9 1064 aa16.97■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Trim5E9PV98 497 aa16.97■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Sec24cG3X972 1096 aaKnown RBP16.97■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Gucy2eP52785 1108 aa16.97■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Tgs1Q923W1 853 aa16.97■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Tmed2Q9R0Q3 201 aa16.97■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Yipf1Q91VU1 306 aa16.97■□□□□ 0.31
Clcn3-203ENSMUST00000093490 IkbkbO88351 757 aa16.96■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Zscan2Q07230 614 aa16.96■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Cog7Q3UM29 770 aa16.96■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Lmbrd1Q8K0B2 537 aa16.96■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Apol6B7ZC55 329 aa16.96■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Stmn1P54227 149 aaKnown RBP16.96■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Rps12P63323 132 aaKnown RBP16.96■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Slc9a2Q3ZAS0 814 aa16.96■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Map3k7Q62073 579 aa16.96■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Brd2Q7JJ13 798 aaKnown RBP16.96■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Arhgap29Q8CGF1 1266 aa16.96■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Arl8aQ8VEH3 186 aa16.96■□□□□ 0.31
Clcn3-203ENSMUST00000093490 Tnni1Q9WUZ5 187 aa16.96■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms