RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Gtf2iQ9ESZ8 998 aaKnown RBP11.21□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Ahdc1Q6PAL7 1594 aaKnown RBP11.21□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Gnrh1P13562 90 aa11.21□□□□□ -0.61
Scn8a-201ENSMUST00000082209 NyxP83503 476 aa11.21□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Kcnb1Q03717 857 aa11.21□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Ifit1Q64282 463 aa11.21□□□□□ -0.61
Scn8a-201ENSMUST00000082209 P4hbP09103 509 aaKnown RBP11.21□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Sfi1Q3UZY0 1216 aaKnown RBP11.21□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Ddx19bQ8BZY3 494 aa11.21□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Champ1Q8K327 802 aaKnown RBP11.21□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Ero1aQ8R180 464 aa11.21□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Ifi207E9Q3L4 978 aa11.21□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Fyb2A2A995 729 aa11.21□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Adcy7P51829 1099 aa11.21□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Trip13Q3UA06 432 aa11.21□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Rps6kc1Q8BLK9 1056 aa11.21□□□□□ -0.62
Scn8a-201ENSMUST00000082209 CoasyQ9DBL7 563 aa11.21□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Cpsf3Q9QXK7 684 aa11.21□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Fem1bQ9Z2G0 627 aa11.21□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Mettl17Q3U2U7 461 aa11.21□□□□□ -0.62
Scn8a-201ENSMUST00000082209 BlvraQ9CY64 295 aa11.21□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Cdc27A2A6Q5 825 aa11.21□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Arl4cP61208 192 aa11.21□□□□□ -0.62
Scn8a-201ENSMUST00000082209 SnrpfP62307 86 aaKnown RBP11.21□□□□□ -0.62
Scn8a-201ENSMUST00000082209 PtgdrP70263 357 aa11.21□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Ccdc22Q9JIG7 627 aa11.21□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Krt24A1L317 512 aa11.21□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Rad51ap2G3UW63 976 aa11.21□□□□□ -0.62
Scn8a-201ENSMUST00000082209 1700013D24RikQ0P521 120 aa11.21□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Lrch2Q3UMG5 773 aa11.21□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Q8BWG4 1187 aa11.21□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Vps33bP59016 617 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 ThrspQ62264 150 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Bbs9Q811G0 885 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Abcg3Q99P81 650 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Zmat2Q9CPW7 199 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Zfp846G3X996 541 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Gm21962L7N280 338 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Idi1P58044 227 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Trpc6Q61143 930 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Tbc1d22bQ80VE5 505 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Sytl1Q99N80 567 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Abcb1bP06795 1276 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Miga1Q4QQM5 600 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Orc2Q60862 576 aaKnown RBP11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Snf8Q9CZ28 258 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 DtnaQ9D2N4 746 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Shcbp1Q9Z179 668 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Ddx3yQ62095 658 aaKnown RBP11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Bud13Q8R149 637 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 6030498E09RikB1AX85 169 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Rfx8D3YU81 596 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Fam160b1Q8CDM8 764 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Apol6B7ZC55 329 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Stam2O88811 523 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 PighQ5M9N4 188 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Dclre1bQ8C7W7 541 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Znf608Q56A10 1511 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Kif23E9Q5G3 953 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Pik3r1P26450 724 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 SrlQ7TQ48 910 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Znf598Q80YR4 908 aaKnown RBP11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Tbc1d19Q8VDV7 526 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Tmed2Q9R0Q3 201 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Gpr182P43142 395 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Usp17leQ7M764 540 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Vps33aQ9D2N9 598 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Mtmr7Q9Z2C9 660 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Suclg2Q9Z2I8 433 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Qtrt2B8ZXI1 415 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 GypcQ78HU7 95 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 BaatQ91X34 420 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 HgsQ99LI8 775 aa11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 AatfQ9JKX4 526 aaKnown RBP11.2□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Pagr1bF6V0H0 108 aa11.19□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Vmn2r71L7N2D8 855 aa11.19□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Akap7Q7TN79 314 aa11.19□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Fam20aQ8CID3 541 aa11.19□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Pagr1aQ99L02 253 aa11.19□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Setd6Q9CWY3 473 aa11.19□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Crlf3Q9Z2L7 442 aa11.19□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Pfkfb3A7UAK5 555 aa11.19□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Ece1Q4PZA2 769 aa11.19□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Usp28Q5I043 1051 aa11.19□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Gnl3Q8CI11 538 aaKnown RBP11.19□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Mms19Q9D071 1031 aa11.19□□□□□ -0.62
Scn8a-201ENSMUST00000082209 PplQ9R269 1755 aa11.19□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Brpf3B2KF05 1204 aaKnown RBP11.19□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Xxylt1Q3U4G3 392 aa11.19□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Gngt2Q61017 69 aa11.19□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Spata21Q8BHW6 681 aa11.19□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Zfp449Q8CB76 518 aa11.19□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Atp1a1Q8VDN2 1023 aaKnown RBP11.19□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Eif4a3Q91VC3 411 aaKnown RBP11.19□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Tekt1Q9DAJ2 418 aa11.19□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Apobec2Q9WV35 224 aa11.19□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Anxa1P10107 346 aaKnown RBP11.19□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Hspa2P17156 633 aa11.19□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Pdcd2P46718 343 aa11.19□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Krt35Q497I4 455 aa11.19□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms