RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Snx12O70493 165 aa10.07□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Gbp10Q000W5 611 aa10.07□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Ccdc50Q810U5 305 aaKnown RBP10.07□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Atg16l1Q8C0J2 607 aa10.07□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 SnrkQ8VDU5 748 aa10.07□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Ccdc65Q8VHI7 493 aa10.07□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Pdcd7Q9WTY1 482 aa10.07□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Peg12Q9WVA7 283 aa10.07□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 SftpbP50405 377 aa10.07□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Usp44Q8C2S0 711 aa10.07□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Ercc4Q9QZD4 917 aa10.07□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Uggt1Q6P5E4 1551 aa10.07□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 DgkkE9Q7N4 1118 aa10.07□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Vmn2r78K7N6U5 853 aa10.07□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Per2O54943 1257 aa10.07□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Lig1P37913 916 aa10.07□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Coa7Q921H9 231 aa10.07□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Gins2Q9D600 185 aa10.07□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Large1Q9Z1M7 756 aa10.07□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Rtl9Q32KG4 1339 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Tulp4Q9JIL5 1547 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 GfapP03995 430 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Sh3gl3Q62421 347 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 PrimpolQ6P1E7 537 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Eif3cQ8R1B4 911 aaKnown RBP10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Cox16Q9CR63 106 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Gm9774A0A0A6YVU8 407 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Gm6370A0A0G2JGX9 315 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Gm6588E9Q3K0 461 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Gm6309L7N481 315 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Tfcp2l1Q3UNW5 479 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 H6pdQ8CFX1 789 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Trim32Q8CH72 655 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Ccdc92Q8VDN4 314 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Ccne2Q9Z238 404 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Abcc3B2RX12 1523 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Syngap1F6SEU4 1340 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Vsnl1P62761 191 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Sptlc3Q8BG54 563 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Fbxo18Q8K2I9 1042 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Pdik1lQ8QZR7 341 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Dnajc3Q91YW3 504 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Ttc1Q91Z38 292 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Maged2Q9ER67 616 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Arl6ip4Q9JM93 229 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Mtmr2Q9Z2D1 643 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Med14A2ABV5 1459 aaKnown RBP10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Tcp11x2A2AEI7 503 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 GabrdP22933 449 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Alppl2P24823 529 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Mettl17Q3U2U7 461 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Asap3Q5U464 904 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Vav2Q60992 868 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 PhkbQ7TSH2 1085 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Sap130Q8BIH0 1057 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 6820408C15RikQ8BJX2 354 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Haus7Q8BKT8 364 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Kcnh2O35219 1162 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Tmod1P49813 359 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Dclk2Q6PGN3 756 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Ppp1r12bQ8BG95 976 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Ttc26Q8BS45 554 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Trim35Q8C006 501 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Cdk8Q8R3L8 464 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 ErmapQ9JLN5 566 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Pcsk1nQ9QXV0 258 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Wdr46Q9Z0H1 622 aaKnown RBP10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Ulk4Q3V129 1303 aa10.06□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Gm7168A0AUV4 508 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Ttc38A3KMP2 465 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Tpp1O89023 562 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Gm5592Q3V0A6 857 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Znf827Q505G8 1078 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Lrrc14Q8VC16 493 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Rpap2Q8VC34 614 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Trim16Q99PP9 556 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Kdm8Q9CXT6 414 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Gtf2ird1Q9JI57 1104 aaKnown RBP10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Akt3Q9WUA6 479 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Cog1Q9Z160 980 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Frmpd4A2AFR3 1320 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Gm6657A0A1B0GRJ3 277 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Cyp4f40G3UW81 524 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Nmt2O70311 529 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Pfdn6Q03958 127 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Prmt9Q3U3W5 846 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Lrig2Q52KR2 1054 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Pramel6Q810Y9 485 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Rfx6Q8C7R7 927 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Zcrb1Q9CZ96 217 aaKnown RBP10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Med7Q9CZB6 233 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Slc8a3S4R2P9 928 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 A630010A05RikA9C473 232 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Vmn2r79E9Q067 851 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 RimklbQ80WS1 387 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Serpinb10Q8K1K6 397 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Fam84aQ9D650 292 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Dbn1Q9QXS6 706 aa10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Wdr36Q3TAQ9 899 aaKnown RBP10.05□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Znf652Q5DU09 608 aa10.05□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms