RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Atp13a3Q5XF89 1219 aa12.43□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Peg10Q7TN75 958 aaKnown RBP12.43□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Pnma2Q8BHK0 365 aa12.43□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Ttc26Q8BS45 554 aa12.43□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Slc9b1Q8C0X2 565 aa12.43□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Csgalnact2Q8C1F4 542 aa12.43□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Irak4Q8R4K2 459 aa12.43□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Atp1a1Q8VDN2 1023 aaKnown RBP12.43□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Bbox1Q924Y0 387 aa12.43□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Tfr2Q9JKX3 798 aa12.43□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Mkrn1Q9QXP6 481 aa12.43□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Calcoco2A2A6M5 331 aa12.43□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Q66JV7 365 aa12.43□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Plcg2Q8CIH5 1265 aa12.43□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Spats2Q8K1N4 545 aaKnown RBP12.43□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Ly6iQ9WU67 134 aa12.43□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Knop1Q9Z2Q2 478 aaKnown RBP12.43□□□□□ -0.42
Ddx55-201ENSMUST00000071057 NpcdF8VQB8 469 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Scgb2b19J3QM75 112 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Zfp850J3QPC5 689 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Parp2O88554 559 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Mpp3O88910 568 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Pdrg1P59048 133 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Carmil2Q3V3V9 1296 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Senp6Q6P7W0 1132 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Herc4Q6PAV2 1057 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Zhx2Q8C0C0 836 aaKnown RBP12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 CnstQ8CBC4 711 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Acat1Q8QZT1 424 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Haus2Q9CQS9 234 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 RnmtQ9D0L8 465 aaKnown RBP12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Cnbd1B1AWM0 430 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Fam205a1D3YZF6 1314 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Pmm1O35621 262 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Sema3eP70275 775 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Meis3P97368 378 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Tmem35bQ3U0Y2 150 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Znf532Q6NXK2 1036 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Gpbp1l1Q6NZP2 473 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 March6Q6ZQ89 909 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Maats1Q8BRC6 783 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 ClasrpQ8CFC7 668 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Phldb2Q8K1N2 1249 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Dppa3Q8QZY3 150 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Uap1Q91YN5 522 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Tmem39aQ9CYC3 486 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Cmtm5Q9D6G9 156 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 MrgbpQ9DAT2 204 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Nap1l5Q9JJF0 156 aa12.42□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Flt1P35969 1333 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Chrna9G3X8Z7 479 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 ByslO54825 436 aaKnown RBP12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Hoxa11P31311 313 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 S100a5P63084 93 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 PtgdrP70263 357 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Nsun7Q14AW5 724 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Ncoa7Q6DFV7 943 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Ccdc148Q6P5U8 527 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Fbxo10Q7TQF2 950 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 MtrrQ8C1A3 696 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Exd1Q8CDF7 570 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Spata4Q8K3V1 295 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Slc39a3Q99K24 317 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Atp6v1g1Q9CR51 118 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Tpcn1Q9EQJ0 817 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Ifi202Q9R002 445 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Slc26a4Q9R155 780 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Bcorl1A2AQH4 1781 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Col2a1P28481 1487 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Gcom1E9PZ54 550 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Pip4k2aO70172 405 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Wnt10bP48614 389 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 CtshP49935 333 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 MyzapQ3UIJ9 466 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Ccdc33Q3ULW6 985 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 EregQ61521 162 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Stxbp2Q64324 593 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Nap1l4Q78ZA7 375 aaKnown RBP12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Ccdc186Q8C9S4 917 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Coa7Q921H9 231 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Rfc4Q99J62 364 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Ndst4Q9EQW8 872 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Eif2ak1Q9Z2R9 619 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 SynrgQ5SV85 1306 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Gm6370A0A0G2JGX9 315 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Gm1993A6X8I0 212 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 SlxD3Z347 212 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Gm6309L7N481 315 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Rad51bO35719 350 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Xirp1O70373 1129 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 SarsP26638 512 aaKnown RBP12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Pth1rP41593 591 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Ezh1P70351 747 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Znf827Q505G8 1078 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Naa35Q6PHQ8 725 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Phf8Q80TJ7 1023 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Armcx3Q8BHS6 379 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Morc2bQ8C5W4 1022 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Vps33aQ9D2N9 598 aa12.41□□□□□ -0.42
Ddx55-201ENSMUST00000071057 CsadQ9DBE0 493 aa12.41□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 131.2 ms