RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Efcab14Q8BGQ6 484 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Mtmr4Q91XS1 1190 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Klra10Q9R1G6 266 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Mboat4P0C7A3 435 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Q3TTJ4 293 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Qrich1Q3UA37 777 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Tmed8Q3UHI4 326 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Ehbp1Q69ZW3 1231 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 SugctQ7TNE1 436 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Celf4Q7TSY6 486 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 AdalQ80SY6 360 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Nup58Q8R332 587 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Zkscan3Q91VW9 553 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Arhgef7Q9ES28 862 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Myh7Q91Z83 1935 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Rasal2E9PW37 1286 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Akr1b10G5E895 316 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Mier3Q3UHF3 551 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Rnpc3Q3UZ01 514 aaKnown RBP10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Stxbp3Q60770 592 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Trpc6Q61143 930 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Sema4bQ62179 823 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Mindy1Q76LS9 468 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Snx24Q9CRB0 169 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Slc40a1Q9JHI9 570 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Prdm11A2AGX3 565 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Dnaaf5B9EJR8 853 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Pik3caP42337 1068 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Hsd17b1P51656 344 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Gas7Q60780 421 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 HrQ61645 1182 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 GnptabQ69ZN6 1235 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Bank1Q80VH0 783 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Psmd2Q8VDM4 908 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Mettl13Q91YR5 698 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Myh6Q02566 1938 aaKnown RBP10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 March10E9PX79 788 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Sclt1G5E861 688 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Xirp1O70373 1129 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Krt31Q61765 416 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Clca4aQ6Q473 924 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 DaglaQ6WQJ1 1044 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Adcy2Q80TL1 1090 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Igdcc3Q8BQC3 813 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Q8BWG4 1187 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Appl2Q8K3G9 662 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Chn1Q91V57 459 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Ascc1Q9D8Z1 356 aaKnown RBP10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Myoz2Q9JJW5 264 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Gm28036V9GXJ1 658 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Lrp6O88572 1613 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 MycnP03966 462 aaKnown RBP10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Sept2P42208 361 aaKnown RBP10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Fam207aP58468 219 aaKnown RBP10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Ppp4cP97470 307 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Zbtb17Q60821 794 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Cypt2Q6P924 180 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Foxo6Q70KY4 559 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Fnbp1Q80TY0 616 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Acad11Q80XL6 779 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Morc2bQ8C5W4 1022 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Atxn7Q8R4I1 867 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Ube2sQ921J4 223 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Mis12Q9CY25 206 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 IqcdQ9D3V1 458 aa10.59□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Esr2O08537 530 aa10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Fgd3O88842 733 aa10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Eef1dP57776 281 aaKnown RBP10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 MagohP61327 146 aaKnown RBP10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Zc3h18Q0P678 948 aaKnown RBP10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Grm4Q68EF4 912 aa10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Usp17leQ7M764 540 aa10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Riox2Q8CD15 465 aa10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Mmgt1Q8K273 131 aaKnown RBP10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Znf830Q8R1N0 363 aaKnown RBP10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Yipf1Q91VU1 306 aa10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 MagohbQ9CQL1 146 aa10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Psma8Q9CWH6 250 aa10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 MesdQ9ERE7 224 aa10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Cacna2d3Q9Z1L5 1091 aa10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Mtmr9Q9Z2D0 545 aa10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Nmt1O70310 496 aaKnown RBP10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 HarsQ61035 509 aa10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 WaplQ65Z40 1200 aaKnown RBP10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 IarsQ8BU30 1262 aa10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 E330017A01RikQ8BU47 192 aa10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Proser2Q8C5R2 471 aa10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Pramef12Q9D2F1 463 aa10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Hsf2bpQ9D4G2 338 aa10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 March8Q9DBD2 286 aa10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Znf394Q9Z1D9 521 aa10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Gna14P30677 355 aa10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 NppbP40753 121 aa10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Tmtc1Q3UV71 942 aa10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Git1Q68FF6 770 aa10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 TwistnbQ78WZ7 330 aaKnown RBP10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Gpr101Q80T62 511 aa10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Vps52Q8C754 723 aaKnown RBP10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Bst2Q8R2Q8 172 aa10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Coro7Q9D2V7 922 aa10.58□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms