RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Msh2P43247 935 aaKnown RBP16.14■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Dpcr1Q3TNW5 500 aa16.14■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Pnma5Q5DTT8 618 aa16.14■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 TwistnbQ78WZ7 330 aaKnown RBP16.14■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Actn1Q7TPR4 892 aaKnown RBP16.14■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Ccdc28aQ8CEI3 192 aa16.14■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Lzts2Q91YU6 671 aa16.14■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Rasgef1cQ9D300 466 aa16.14■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 CoasyQ9DBL7 563 aa16.14■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Duox1A2AQ92 1551 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Tbc1d16A2ABG4 766 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Myo1eE9Q634 1107 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Atp6v0a2P15920 856 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Agxt2Q3UEG6 513 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 GmncQ3URY2 333 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Krt35Q497I4 455 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Tbc1d1Q60949 1255 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Pja2Q80U04 707 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Bbs9Q811G0 885 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 AagabQ8R2R3 316 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Lpin2Q99PI5 893 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Edf1Q9JMG1 148 aaKnown RBP16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Dock5B2RY04 1868 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Armc3A2AU72 881 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Cfap70D3YVL2 1141 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Gm6121L7MUF1 212 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Ebf2O08792 575 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Rab21P35282 222 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Nlrp4cQ3TKR3 982 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Fam183bQ5NC57 135 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Phc1Q64028 1012 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Swap70Q6A028 585 aaKnown RBP16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 R3hdm2Q80TM6 1044 aaKnown RBP16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Ppfia2Q8BSS9 1257 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 GanQ8CA72 597 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Rassf9Q8K342 435 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 MyripQ8K3I4 856 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Trpm8Q8R4D5 1104 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 ZgpatQ8VDM1 511 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Chn1Q91V57 459 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Dnajc19Q9CQV7 116 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Rabgef1Q9JM13 491 aa16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Pacsin2Q9WVE8 486 aaKnown RBP16.13■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 PappaQ8R4K8 1624 aa16.12■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 NesQ6P5H2 1864 aaKnown RBP16.12■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Cep85lA0A1W2P884 806 aa16.12■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Zfp408H7BX78 710 aa16.12■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Kcnh2O35219 1162 aa16.12■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Trip13Q3UA06 432 aa16.12■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Znf583Q3V080 568 aa16.12■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Csgalnact2Q8C1F4 542 aa16.12■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Calml4Q91WQ9 153 aa16.12■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 IscuQ9D7P6 168 aa16.12■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Ddx25Q9QY15 484 aa16.12■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Tex21Q9R0U9 575 aa16.12■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Mapk8ip1Q9WVI9 707 aa16.12■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Zmym2Q9CU65 1376 aa16.12■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Slfn8B1ARD8 910 aa16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Zfp275G3X904 499 aa16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Pde8aO88502 823 aa16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Parp2O88554 559 aa16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Mboat4P0C7A3 435 aa16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Setd4P58467 439 aa16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Gcnt1Q09324 428 aa16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Fam83bQ0VBM2 1012 aa16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Islr2Q5RKR3 745 aa16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Adad1Q5SUE7 619 aa16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Q8C6G1 249 aa16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 HibchQ8QZS1 385 aa16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Sgms1Q8VCQ6 419 aa16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Bzw2Q91VK1 419 aaKnown RBP16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 TbcbQ9D1E6 244 aa16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Krt71Q9R0H5 524 aa16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Rsbn1lD3Z0K6 821 aa16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Lrrc32G3XA59 663 aa16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Xrcc6P23475 608 aa16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Polr2fP61219 127 aa16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Trim80Q3V061 624 aa16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Krt12Q64291 487 aa16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Skor1Q8BX46 964 aa16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Cadps2Q8BYR5 1297 aa16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Dennd1aQ8K382 1016 aa16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Ero1aQ8R180 464 aa16.11■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Nfxl1E9Q8I7 918 aaKnown RBP16.1■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Lrrn4P59383 733 aa16.1■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Znf667Q2TL60 609 aa16.1■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Krt87Q6IMF0 495 aa16.1■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Foxo6Q70KY4 559 aa16.1■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Ube2q2Q8K2Z8 378 aa16.1■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Krt34Q9D646 392 aa16.1■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 NgdnQ9DB96 315 aaKnown RBP16.1■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 DexiQ9WUQ7 95 aa16.1■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Ccdc78D3Z5T1 437 aa16.1■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Xirp1O70373 1129 aa16.1■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 H2afzP0C0S6 128 aa16.1■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Atp11aP98197 1187 aa16.1■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 H2afvQ3THW5 128 aa16.1■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Skap1Q3UUV5 355 aa16.1■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Nr2e1Q64104 385 aa16.1■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 C2cd2lQ80X80 706 aa16.1■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms