RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Slc6a16A0A1L1SR47 742 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Barx2O08686 283 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Diaph1O08808 1255 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Pgk2P09041 417 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Cd68P31996 326 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Lrrc14bQ3UJB3 510 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Nt5c2Q3V1L4 560 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Fam183bQ5NC57 135 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Igbp1Q61249 340 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Ecm1Q61508 559 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Ppp1r13bQ62415 1087 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Slain1Q68FF7 579 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Moxd2Q7TT41 619 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Ubap2lQ80X50 1107 aaKnown RBP9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Zdhhc15Q8BGJ0 337 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Dnajc18Q9CZJ9 357 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 PpihQ9D868 188 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Add1Q9QYC0 735 aaKnown RBP9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Knop1Q9Z2Q2 478 aaKnown RBP9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Scgb2b18A0A087WPA9 112 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 GpiP06745 558 aaKnown RBP9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Psmc5P62196 406 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Slc16a10Q3U9N9 512 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Tsg101Q61187 391 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Tdp1Q8BJ37 609 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 HyiQ8R1F5 277 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Rhobtb3Q9CTN4 611 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Limd1Q9QXD8 668 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Nek3Q9R0A5 511 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Hebp1Q9R257 190 aa9.63□□□□□ -0.87
Trim39-201ENSMUST00000042717 Vmn2r79E9Q067 851 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Apba3O88888 571 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Hps5P59438 1126 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Nom1Q3UFM5 854 aaKnown RBP9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Eif3j1Q3UGC7 261 aaKnown RBP9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Mns1Q61884 491 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Rasal3Q8C2K5 1041 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Znf445Q8R2V3 986 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Rpap2Q8VC34 614 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Ranbp17Q99NF8 1088 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Dhx30Q99PU8 1217 aaKnown RBP9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Itga2bQ9QUM0 1033 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Miga1Q4QQM5 600 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Srrm1Q52KI8 946 aaKnown RBP9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Zfp943Q6NZP4 507 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Smarca1Q6PGB8 1046 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Ercc6lQ8BHK9 1240 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Rbm41Q8JZV4 413 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 NptxrQ99J85 493 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Tlcd1Q99JT6 247 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Ccdc94Q9D6J3 314 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Copb1Q9JIF7 953 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Trappc11B2RXC1 1133 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Prl2c2P04095 224 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 PrkceP16054 737 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Sox5P35710 763 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 PklrP53657 574 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Fgfr4Q03142 799 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 A1cfQ5YD48 595 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Zbtb7bQ64321 544 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Raver2Q7TPD6 673 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Nsun6Q7TS68 476 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Ece2Q80Z60 881 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Slc17a8Q8BFU8 601 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Cep95Q8BVV7 827 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Psmd2Q8VDM4 908 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Vwa5aQ99KC8 793 aaKnown RBP9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Gtf3c6Q9D8P7 227 aa9.62□□□□□ -0.87
Trim39-201ENSMUST00000042717 Prr14lE9Q7C4 1971 aa9.61□□□□□ -0.87
Trim39-201ENSMUST00000042717 Cntnap2Q9CPW0 1332 aa9.61□□□□□ -0.87
Trim39-201ENSMUST00000042717 Klhdc7aA2APT9 773 aa9.61□□□□□ -0.87
Trim39-201ENSMUST00000042717 Ttll6A4Q9E8 822 aa9.61□□□□□ -0.87
Trim39-201ENSMUST00000042717 Mov10P23249 1004 aaKnown RBP9.61□□□□□ -0.87
Trim39-201ENSMUST00000042717 Pdrg1P59048 133 aa9.61□□□□□ -0.87
Trim39-201ENSMUST00000042717 Ric8aQ3TIR3 530 aa9.61□□□□□ -0.87
Trim39-201ENSMUST00000042717 Lrrc55Q3UY51 311 aa9.61□□□□□ -0.87
Trim39-201ENSMUST00000042717 E2f8Q58FA4 860 aa9.61□□□□□ -0.87
Trim39-201ENSMUST00000042717 Znf280dQ68FE8 974 aa9.61□□□□□ -0.87
Trim39-201ENSMUST00000042717 Znf131Q8K3J5 619 aa9.61□□□□□ -0.87
Trim39-201ENSMUST00000042717 Kif17Q99PW8 1038 aa9.61□□□□□ -0.87
Trim39-201ENSMUST00000042717 Rabgap1A2AWA9 1064 aa9.61□□□□□ -0.87
Trim39-201ENSMUST00000042717 Gpatch11Q3UFS4 262 aa9.61□□□□□ -0.87
Trim39-201ENSMUST00000042717 Slc9a2Q3ZAS0 814 aa9.61□□□□□ -0.87
Trim39-201ENSMUST00000042717 Ovgp1Q62010 721 aa9.61□□□□□ -0.87
Trim39-201ENSMUST00000042717 Lrrc8aQ80WG5 810 aa9.61□□□□□ -0.87
Trim39-201ENSMUST00000042717 Nek9Q8K1R7 984 aa9.61□□□□□ -0.87
Trim39-201ENSMUST00000042717 Adcy3Q8VHH7 1145 aa9.61□□□□□ -0.87
Trim39-201ENSMUST00000042717 Spdl1Q923A2 608 aa9.61□□□□□ -0.87
Trim39-201ENSMUST00000042717 Me2Q99KE1 589 aa9.61□□□□□ -0.87
Trim39-201ENSMUST00000042717 Usp26Q99MX1 835 aa9.61□□□□□ -0.87
Trim39-201ENSMUST00000042717 1700129C05RikQ9CQ77 218 aa9.61□□□□□ -0.87
Trim39-201ENSMUST00000042717 Syce1Q9D495 329 aa9.61□□□□□ -0.87
Trim39-201ENSMUST00000042717 Otud7bB2RUR8 840 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Heatr4E9Q357 955 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Vmn2r78K7N6U5 853 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Mdm4O35618 489 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Tpm2P58774 284 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 PtgdrP70263 357 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Specc1lQ2KN98 1118 aaKnown RBP9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Kmt5aQ2YDW7 349 aa9.6□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms