RNA–Protein interactions for RNA: ENSMUST00000042345.6

Ctnna1-201, Transcript of Catenin alpha-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctnna1, Length 3,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna1-201ENSMUST00000042345 Vcpip1Q8CDG3 1220 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Coa7Q921H9 231 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Hdac9Q99N13 588 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Nup50Q9JIH2 466 aaKnown RBP10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Trpc5Q9QX29 975 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 DexiQ9WUQ7 95 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Atp1a4Q9WV27 1032 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Gcom1E9PZ54 550 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Tnfrsf11aO35305 625 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Klrk1O54709 232 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Rnf216P58283 853 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 MyzapQ3UIJ9 466 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Herc4Q6PAV2 1057 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Kbtbd13Q8C828 458 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Mmgt1Q8K273 131 aaKnown RBP10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Fam13bQ8K2H3 851 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Dact1Q8R4A3 778 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 DaglbQ91WC9 669 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Syf2Q9D198 242 aaKnown RBP10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Sapcd2Q9D818 391 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Knop1Q9Z2Q2 478 aaKnown RBP10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Skint3A7TZF0 458 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Foxn2E9Q7L6 429 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Kcnh2O35219 1162 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Pgrmc1O55022 195 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Kif2aP28740 705 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Kifap3P70188 793 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Zc3h18Q0P678 948 aaKnown RBP10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Ezh2Q61188 746 aaKnown RBP10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Gpd2Q64521 727 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Gprasp2Q8BUY8 826 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Traf3ip3Q8C0G2 513 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Rnf25Q9QZR0 456 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Klhdc7aA2APT9 773 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Map4k1P70218 827 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Tubb5P99024 444 aaKnown RBP10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Q66JV7 365 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Garem2Q6PAJ3 880 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Naa35Q6PHQ8 725 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Brd2Q7JJ13 798 aaKnown RBP10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 LdhdQ7TNG8 484 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Lrrc1Q80VQ1 524 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Cacnb1Q8R3Z5 597 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Olfr805Q8VFI4 319 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 CbsQ91WT9 561 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 SerhlQ9EPB5 311 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Ddx25Q9QY15 484 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Trim10Q9WUH5 489 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Ripor3A1L3T7 938 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Fyb2A2A995 729 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Mageb2A2AHM0 380 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 TazI7HJS2 263 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 D1Pas1P16381 660 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Islr2Q5RKR3 745 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Tpm4Q6IRU2 248 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Fbxo10Q7TQF2 950 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Fbxo28Q8BIG4 368 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Sar1bQ9CQC9 198 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Erp44Q9D1Q6 406 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 MicalclQ9D5U9 680 aa10.05□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 A0A286YCQ6 122 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Oip5A2AQ14 241 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Zfp597E9Q6S0 419 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Mcm5P49718 733 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Vsnl1P62761 191 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Prr7Q3V0I2 269 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Carmil2Q3V3V9 1296 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 GartQ64737 1010 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 SucoQ8C341 1250 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Znrd1-asQ8R0E5 213 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Med24Q99K74 987 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Rassf3Q99P51 232 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Mageb16Q9CWV4 363 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Ccdc89Q9DA73 370 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Clrn2B2RVW2 232 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Actn4P57780 912 aaKnown RBP10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Sec31aQ3UPL0 1230 aaKnown RBP10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Sez6lQ6P1D5 963 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Slc9a9Q8BZ00 644 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Efcab8Q8C9R9 203 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Kcnv2Q8CFS6 562 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Klhl20Q8VCK5 604 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Prl2b1Q9DAZ2 228 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Mical3Q8CJ19 1993 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Cap1P40124 474 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Nr2f2P43135 414 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Stim2P83093 746 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Edem3Q2HXL6 931 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Frmd8Q3UFK8 466 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Ccdc84Q4VA36 332 aaKnown RBP10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Rgl1Q60695 768 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Sh3gl1Q62419 368 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 RragaQ80X95 313 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Cyp26b1Q811W2 512 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Dhx32Q8BZS9 744 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Ppil2Q9D787 521 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Il21rQ9JHX3 529 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 EmcnQ9R0H2 261 aa10.04□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Ankrd35E9Q9D8 996 aa10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 NfibP97863 570 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms