RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Eya4Q9Z191 616 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Ptpn23Q6PB44 1692 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Serpinb6eI7HJI3 429 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Vti1aO89116 217 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Irak1Q62406 710 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Pla2g4cQ64GA5 597 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Efcab14Q8BGQ6 484 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Tsen34Q8BMZ5 316 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Clasp2Q8BRT1 1286 aaKnown RBP11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Pak4Q8BTW9 593 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 P3h4Q8K2B0 443 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Ppp2r3dQ9Z176 491 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Flt1P35969 1333 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Rimbp3Q3V0F0 1606 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Art2aP17981 287 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Ppp4cP97470 307 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Foxn3Q499D0 457 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Drd5Q8BLD9 478 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Lrrc8cQ8R502 803 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Ndufv1Q91YT0 464 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Kdm8Q9CXT6 414 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Mad2l2Q9D752 211 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 1700016D06RikQ9DAA5 166 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Sertad1Q9JL10 236 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 IghaA0A0A6YXW6 389 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Ttll10A4Q9F3 704 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Dnajb6O54946 365 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Nck2O55033 380 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Mphosph8Q3TYA6 858 aaKnown RBP11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Mum1l1Q4VA55 681 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Lrig2Q52KR2 1054 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Akap4Q60662 849 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 CtifQ6PEE2 600 aaKnown RBP11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Taf12Q8VE65 161 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Gm1661E9Q963 441 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Sec24cG3X972 1096 aaKnown RBP11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Gimap9G3X987 291 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Trpc6Q61143 930 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Epha7Q61772 998 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Brd2Q7JJ13 798 aaKnown RBP11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Ube3cQ80U95 1083 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 RimklbQ80WS1 387 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 L3mbtl3Q8BLB7 883 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Naa25Q8BWZ3 972 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Cfap36Q8C6E0 343 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Sept6Q9R1T4 434 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Cog1Q9Z160 980 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 SynrgQ5SV85 1306 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Lrrc38A2VDH3 298 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Actn4P57780 912 aaKnown RBP11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Fam89aQ14BJ1 175 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Tnni3kQ5GIG6 834 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Zfp341Q6PGC9 846 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Kbtbd13Q8C828 458 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Phf20l1Q8CCJ9 1013 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Gtpbp10Q8K013 366 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Tlr3Q99MB1 905 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Fam133bQ9CVI2 245 aaKnown RBP11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Extl3Q9WVL6 918 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Myom1Q62234 1667 aaKnown RBP11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Pcdh10E9PXQ7 1057 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Epha2Q03145 977 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Srrm1Q52KI8 946 aaKnown RBP11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Scfd2Q8BTY8 684 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Fsd1lQ8BYN5 507 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Rint1Q8BZ36 792 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Ciapin1Q8WTY4 309 aa11.11□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Gm9774A0A0A6YVU8 407 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 JrklB2RRL2 523 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Serpinb1cQ5SV42 375 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Sh3gl1Q62419 368 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Q80Y73 168 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Vipas39Q8BGQ1 491 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Cep95Q8BVV7 827 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Slc39a11Q8BWY7 342 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 DpydQ8CHR6 1025 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Dppa3Q8QZY3 150 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Synpo2Q91YE8 1087 aaKnown RBP11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Mms19Q9D071 1031 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Atp6v1e2Q9D593 226 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 ArcQ9WV31 396 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Proca1B0QZF7 307 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Gucy1a2F8VQK3 730 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Rfc1P35601 1131 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 CtshP49935 333 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Hps5P59438 1126 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Slc8a1P70414 970 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Elf1Q60775 612 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Grm4Q68EF4 912 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Cep104Q80V31 926 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Psmd5Q8BJY1 504 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 TbckQ8BM85 762 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Stard7Q8R1R3 373 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Apbb1ipQ8R5A3 670 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Nek8Q91ZR4 698 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Tlcd1Q99JT6 247 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Pabpc6Q9D4E6 643 aaKnown RBP11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Arhgef7Q9ES28 862 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Sucla2Q9Z2I9 463 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Lmtk3Q5XJV6 1424 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 89.4 ms