RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Creb3l3Q91XE9 479 aa13.96□□□□□ -0.18
Rnf4-201ENSMUST00000030992 VillQ91YD6 859 aa13.96□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Sh2b1Q91ZM2 756 aa13.96□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Pex11aQ9Z211 246 aa13.96□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Fam205a1D3YZF6 1314 aa13.95□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Adgrf5G5E8Q8 1348 aa13.95□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Ace3D0G895 737 aa13.95□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Tp53P02340 387 aa13.95□□□□□ -0.18
Rnf4-201ENSMUST00000030992 FechP22315 420 aaKnown RBP13.95□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Slc12a2P55012 1205 aa13.95□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Dpcr1Q3TNW5 500 aa13.95□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Lrig2Q52KR2 1054 aa13.95□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Hdac10Q6P3E7 666 aa13.95□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Il17cQ8K4C5 194 aa13.95□□□□□ -0.18
Rnf4-201ENSMUST00000030992 IntS13Q8QZV7 732 aa13.95□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Cmtm5Q9D6G9 156 aa13.95□□□□□ -0.18
Rnf4-201ENSMUST00000030992 IkQ9Z1M8 557 aaKnown RBP13.95□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Btbd18A0A0A6YY25 723 aa13.95□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Lrrc6O88978 473 aa13.95□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Cd44P15379 778 aa13.95□□□□□ -0.18
Rnf4-201ENSMUST00000030992 CtshP49935 333 aa13.95□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Rbm46P86049 533 aa13.95□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Eif3j1Q3UGC7 261 aaKnown RBP13.95□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Pacsin1Q61644 441 aa13.95□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Eif3j2Q66JS6 263 aa13.95□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Pdzph1Q8BGR1 1238 aa13.95□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Asic2Q925H0 512 aa13.95□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Pstpip2Q99M15 334 aa13.95□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Scn3aA2ASI5 1947 aa13.95□□□□□ -0.18
Rnf4-201ENSMUST00000030992 CatspereP0DP43 985 aa13.94□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Pla2g4aP47713 748 aa13.94□□□□□ -0.18
Rnf4-201ENSMUST00000030992 CnstQ8CBC4 711 aa13.94□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Bcas3Q8CCN5 928 aa13.94□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Acat1Q8QZT1 424 aa13.94□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Bst2Q8R2Q8 172 aa13.94□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Ubxn1Q922Y1 297 aa13.94□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Fam114a1Q9D281 569 aa13.94□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Lrrc38A2VDH3 298 aa13.94□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Eif3dO70194 548 aaKnown RBP13.94□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Znf354cQ571J5 560 aa13.94□□□□□ -0.18
Rnf4-201ENSMUST00000030992 H6pdQ8CFX1 789 aa13.94□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Arhgef25Q9CWR0 618 aa13.94□□□□□ -0.18
Rnf4-201ENSMUST00000030992 4921524L21RikQ9D5T2 438 aa13.94□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Extl2Q9ES89 330 aa13.94□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Usp14Q9JMA1 493 aaKnown RBP13.94□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Acot3Q9QYR7 432 aa13.94□□□□□ -0.18
Rnf4-201ENSMUST00000030992 C87977A2A958 498 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Pja1O55176 578 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Lmnb1P14733 588 aaKnown RBP13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 YdjcQ14BV6 310 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Skap1Q3UUV5 355 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Lrsam1Q80ZI6 727 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 IarsQ8BU30 1262 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Zc3h6Q8BYK8 1177 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Zhx2Q8C0C0 836 aaKnown RBP13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Ccdc113Q8C5T8 377 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Luc7lQ9CYI4 371 aaKnown RBP13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Folh1O35409 752 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 HmmrQ00547 794 aaKnown RBP13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Sfi1Q3UZY0 1216 aaKnown RBP13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Rgl1Q60695 768 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Krt31Q61765 416 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Tlr11Q6R5P0 926 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Fut8Q9WTS2 575 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Kmt2eQ3UG20 1868 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Cacna1fQ9JIS7 1985 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Ap1b1O35643 943 aaKnown RBP13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Rfc1P35601 1131 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Rpl13P47963 211 aaKnown RBP13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Klra9Q2TJJ8 266 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Nhej1Q3KNJ2 295 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Q6PD19 689 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Exoc8Q6PGF7 716 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Brd2Q7JJ13 798 aaKnown RBP13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Sap130Q8BIH0 1057 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 SucoQ8C341 1250 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Nemp2Q8CB65 421 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Dppa3Q8QZY3 150 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Bzw2Q91VK1 419 aaKnown RBP13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Slc25a38Q91XD8 326 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Arhgef7Q9ES28 862 aa13.93□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Nfxl1E9Q8I7 918 aaKnown RBP13.92□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Tnfrsf11aO35305 625 aa13.92□□□□□ -0.18
Rnf4-201ENSMUST00000030992 XlrP05531 208 aa13.92□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Serpina1aP07758 413 aa13.92□□□□□ -0.18
Rnf4-201ENSMUST00000030992 LdhbP16125 334 aaKnown RBP13.92□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Serpina1bP22599 413 aa13.92□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Serpinc1P32261 465 aa13.92□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Serpina1cQ00896 412 aa13.92□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Serpina1dQ00897 413 aa13.92□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Muc3aQ3U5A2 218 aa13.92□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Ccdc114Q3UX62 658 aa13.92□□□□□ -0.18
Rnf4-201ENSMUST00000030992 E2f7Q6S7F2 904 aa13.92□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Acad11Q80XL6 779 aa13.92□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Ergic2Q9CR89 377 aa13.92□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Golga5Q9QYE6 729 aa13.92□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Tjp2Q9Z0U1 1167 aaKnown RBP13.92□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Tspoap1Q7TNF8 1846 aa13.92□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Nmt1O70310 496 aaKnown RBP13.92□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Traf5P70191 558 aa13.92□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms