RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Ncf1Q09014 390 aa19.5■□□□□ 0.71
Ptpra-201ENSMUST00000028769 MlxiplQ99MZ3 864 aa19.5■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Hspa1lP16627 641 aa19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Krt35Q497I4 455 aa19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Vmn1r209Q5NC97 312 aa19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Ift20Q61025 132 aa19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Vwa5aQ99KC8 793 aaKnown RBP19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Nfu1Q9QZ23 255 aa19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Tnip1Q9WUU8 647 aa19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 A0A286YCQ6 122 aa19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Klhdc7aA2APT9 773 aa19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 E9QMW4 1145 aa19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Stat4P42228 749 aa19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Gja5Q01231 358 aa19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Ice2Q3UZ18 988 aaKnown RBP19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Gm5935Q497S0 212 aa19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Vipas39Q8BGQ1 491 aa19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Nop9Q8BMC4 636 aaKnown RBP19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 RalylQ8BTF8 293 aa19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Slc5a5Q99PN0 618 aa19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Rexo2Q9D8S4 237 aa19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Gm45261A0A1B0GSP6 197 aa19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Traf5P70191 558 aa19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Rbm46P86049 533 aa19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Rnpc3Q3UZ01 514 aaKnown RBP19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Arhgap44Q5SSM3 814 aa19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Krt31Q61765 416 aa19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Elmo3Q8BYZ7 720 aa19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 CbsQ91WT9 561 aa19.49■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Clcn6O35454 870 aa19.48■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Klra1P20937 262 aa19.48■□□□□ 0.71
Ptpra-201ENSMUST00000028769 4921524L21RikQ9D5T2 438 aa19.48■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Hnrnph3D3Z3N4 346 aaKnown RBP19.48■□□□□ 0.71
Ptpra-201ENSMUST00000028769 GssP51855 474 aa19.48■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Sp4Q62445 782 aa19.48■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Phf8Q80TJ7 1023 aa19.48■□□□□ 0.71
Ptpra-201ENSMUST00000028769 R3hdm2Q80TM6 1044 aaKnown RBP19.48■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Ms4a5Q810P8 197 aa19.48■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Chn1Q91V57 459 aa19.48■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Mettl13Q91YR5 698 aa19.48■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Arl2bpQ9D385 163 aa19.48■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Rabl3Q9D4V7 236 aa19.48■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Flvcr1B2RXV4 560 aa19.47■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Zc3h7bF8VPP8 982 aaKnown RBP19.47■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Gdpd4Q3TT99 632 aa19.47■□□□□ 0.71
Ptpra-201ENSMUST00000028769 LgsnQ8CIX8 563 aa19.47■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Tbx22Q8K402 517 aa19.47■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Prpf40aQ9R1C7 953 aaKnown RBP19.47■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Vcam1P29533 739 aa19.47■□□□□ 0.71
Ptpra-201ENSMUST00000028769 SlmapQ3URD3 845 aa19.47■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Cdk17Q8K0D0 523 aa19.47■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Dhx58Q99J87 678 aa19.47■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Luc7lQ9CYI4 371 aaKnown RBP19.47■□□□□ 0.71
Ptpra-201ENSMUST00000028769 SyncQ9EPM5 470 aa19.47■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Usp14Q9JMA1 493 aaKnown RBP19.47■□□□□ 0.71
Ptpra-201ENSMUST00000028769 EmcnQ9R0H2 261 aa19.47■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Gap43P06837 227 aa19.47■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Dqx1Q924H9 718 aa19.47■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Pstpip2Q99M15 334 aa19.47■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Eif2ak1Q9Z2R9 619 aa19.47■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Mroh8E9PYI4 1049 aa19.46■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Spata18Q0P557 537 aa19.46■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Nhej1Q3KNJ2 295 aa19.46■□□□□ 0.71
Ptpra-201ENSMUST00000028769 CrkQ64010 304 aa19.46■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Nr2e1Q64104 385 aa19.46■□□□□ 0.71
Ptpra-201ENSMUST00000028769 WaplQ65Z40 1200 aaKnown RBP19.46■□□□□ 0.71
Ptpra-201ENSMUST00000028769 KaznQ69ZS8 779 aa19.46■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Afg3l2Q8JZQ2 802 aaKnown RBP19.46■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Q922C1 641 aa19.46■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Six6os1Q9CTN5 574 aa19.46■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Fbf1A2A870 1173 aa19.46■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Skor2A7M7C7 1008 aa19.46■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Krt36B1AQ75 473 aa19.46■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Etv6P97360 485 aa19.46■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Meis2P97367 477 aa19.46■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Brd2Q7JJ13 798 aaKnown RBP19.46■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Nap1l5Q9JJF0 156 aa19.46■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Myh10Q61879 1976 aaKnown RBP19.46■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Heg1E9Q7X6 1337 aa19.46■□□□□ 0.71
Ptpra-201ENSMUST00000028769 Sema6bO54951 886 aa19.46■□□□□ 0.7
Ptpra-201ENSMUST00000028769 DtnbO70585 659 aa19.46■□□□□ 0.7
Ptpra-201ENSMUST00000028769 Pcdha4O88689 947 aa19.46■□□□□ 0.7
Ptpra-201ENSMUST00000028769 MyrflQ3UN70 904 aa19.46■□□□□ 0.7
Ptpra-201ENSMUST00000028769 Krt9Q6RHW0 743 aa19.46■□□□□ 0.7
Ptpra-201ENSMUST00000028769 AopepQ8BXQ6 817 aa19.46■□□□□ 0.7
Ptpra-201ENSMUST00000028769 Rab3il1Q8VDV3 383 aa19.46■□□□□ 0.7
Ptpra-201ENSMUST00000028769 Tdrd3Q91W18 743 aaKnown RBP19.46■□□□□ 0.7
Ptpra-201ENSMUST00000028769 Tjp2Q9Z0U1 1167 aaKnown RBP19.46■□□□□ 0.7
Ptpra-201ENSMUST00000028769 Gm4985A2ALC6 410 aa19.45■□□□□ 0.7
Ptpra-201ENSMUST00000028769 Ccdc78D3Z5T1 437 aa19.45■□□□□ 0.7
Ptpra-201ENSMUST00000028769 Apol10bG3X9K7 334 aa19.45■□□□□ 0.7
Ptpra-201ENSMUST00000028769 Pstpip1P97814 415 aa19.45■□□□□ 0.7
Ptpra-201ENSMUST00000028769 Tsga10Q6NY15 697 aa19.45■□□□□ 0.7
Ptpra-201ENSMUST00000028769 Galnt17Q7TT15 598 aa19.45■□□□□ 0.7
Ptpra-201ENSMUST00000028769 Lrrc4cQ8C031 640 aa19.45■□□□□ 0.7
Ptpra-201ENSMUST00000028769 Acat1Q8QZT1 424 aa19.45■□□□□ 0.7
Ptpra-201ENSMUST00000028769 Psmd2Q8VDM4 908 aa19.45■□□□□ 0.7
Ptpra-201ENSMUST00000028769 Lman1Q9D0F3 517 aa19.45■□□□□ 0.7
Ptpra-201ENSMUST00000028769 Mzb1Q9D8I1 188 aa19.45■□□□□ 0.7
Ptpra-201ENSMUST00000028769 Myoz2Q9JJW5 264 aa19.45■□□□□ 0.7
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms