RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 Pdzd8B9EJ80 1147 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 LmnaP48678 665 aaKnown RBP8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 SrlQ7TQ48 910 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Zbtb18Q9WUK6 522 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Akap17bA2A3V1 959 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Pgrmc1O55022 195 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Sorbs1Q62417 1290 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Cyp2d12Q8BVD2 504 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Rpap2Q8VC34 614 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Gdap1l1Q8VE33 370 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Coa7Q921H9 231 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 1700016D06RikQ9DAA5 166 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Ptk2bQ9QVP9 1009 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Gm45015A0A140LII9 184 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 FscbA1EGX6 1074 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Nsun7Q14AW5 724 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Mettl17Q3U2U7 461 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Pank2Q3U4S0 443 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 CrkQ64010 304 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Rbm15bQ6PHZ5 887 aaKnown RBP8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 AmphQ7TQF7 686 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Atp6v0d2Q80SY3 350 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Frmd4aQ8BIE6 1020 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Tubgcp2Q921G8 905 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Tmem132aQ922P8 1018 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Gm6370A0A0G2JGX9 315 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Gm6309L7N481 315 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Fkbp1aP26883 108 aaKnown RBP8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Tlr8P58682 1032 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Polr2fP61219 127 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Zfyve27Q3TXX3 415 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 GlyctkQ8QZY2 523 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Psmd2Q8VDM4 908 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Trappc3O55013 180 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 XlrP05531 208 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Il7P10168 154 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Ulk3Q3U3Q1 472 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Cnot7Q60809 285 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Znf12Q7TSI0 686 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Fermt3Q8K1B8 665 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Trmt112Q9DCG9 125 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Ppp2r3cQ9JK24 453 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 EmsyQ8BMB0 1264 aaKnown RBP8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Plekha4Q8VC98 588 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Dr1Q91WV0 176 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Slc2a5Q9WV38 501 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Snx1Q9WV80 522 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Atg4a-psA0A0G2JFS9 396 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Acnat1A2AKK5 416 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Stam2O88811 523 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 P4hbP09103 509 aaKnown RBP8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Arpp19P56212 112 aaKnown RBP8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Hspd1P63038 573 aaKnown RBP8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Nbr1P97432 988 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Aggf1Q7TN31 711 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Sgsm2Q80U12 1005 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 4930504O13RikQ8C5Z9 145 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Atg4aQ8C9S8 396 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 4930449I24RikQ9D5E3 319 aa8.88□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Kctd1Q5M956 257 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Snx14Q8BHY8 964 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Gpr108Q91WD0 569 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Spc24Q9D083 201 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Topaz1E5FYH1 1653 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 1700013D24RikQ0P521 120 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Anp32cQ64G17 123 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Rassf10Q8BL43 508 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Olfr1494Q8VGP8 315 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Taf5lQ91WQ5 589 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Rgs3Q9DC04 966 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Tmed2Q9R0Q3 201 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 EsrraO08580 422 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Creb3Q61817 404 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Anxa13Q99JG3 317 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Ccdc103Q9D9P2 237 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Sdccag3A2AIW0 432 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 U2af2P26369 475 aaKnown RBP8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Tubgcp3P58854 905 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Evi5P97366 809 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Scg2Q03517 617 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Krt80Q0VBK2 452 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Caln1Q9JJG7 219 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 GsdmeQ9Z2D3 512 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Abca17E9PX95 1733 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Abcb1bP06795 1276 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Inpp1P49442 396 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Trim80Q3V061 624 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 1810065E05RikQ5NC41 235 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Adat2Q6P6J0 191 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Fbxo44Q8BK26 255 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Rint1Q8BZ36 792 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Pdia6Q922R8 440 aaKnown RBP8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Cyp27a1Q9DBG1 533 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 PycardQ9EPB4 193 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Slc13a1Q9JHI4 594 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Eif3dO70194 548 aaKnown RBP8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Actn3O88990 900 aaKnown RBP8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 L1camP11627 1260 aa8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 MarsQ68FL6 902 aaKnown RBP8.87□□□□□ -0.99
Ssr1-201ENSMUST00000021864 Arhgap29Q8CGF1 1266 aa8.87□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms