RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Krt14Q61781 484 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 Bcas3Q8CCN5 928 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 Capn15Q9JLG8 1095 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 Vav3Q9R0C8 847 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 Gm5737A0A140LI11 423 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 Gm1758F6VZZ1 202 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 Fgd3O88842 733 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 AaasP58742 546 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 Spata18Q0P557 537 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 Vars2Q3U2A8 1060 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 Ift20Q61025 132 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 Ttc22Q8C159 568 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 Ccdc89Q9DA73 370 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 Eid1Q9DCR4 169 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 Tjp2Q9Z0U1 1167 aaKnown RBP17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 1700016G14RikA0A286YCZ6 238 aa17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 Gap43P06837 227 aa17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 EporP14753 507 aa17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 Stat4P42228 749 aa17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 Ptger2Q62053 362 aa17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 Usp17leQ7M764 540 aa17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 Lpin2Q99PI5 893 aa17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 Ddah1Q9CWS0 285 aa17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 Sf3a3Q9D554 501 aaKnown RBP17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 IkQ9Z1M8 557 aaKnown RBP17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 Col1a1P11087 1453 aa17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 Gm28510A0A087WP28 240 aa17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 Vmn2r79E9Q067 851 aa17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 NppbP40753 121 aa17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 Cdc25aP48964 514 aa17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 Gdpd4Q3TT99 632 aa17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 Mettl14Q3UIK4 456 aa17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 Foxo6Q70KY4 559 aa17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 Ms4a5Q810P8 197 aa17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 Bola2Q8BGS2 86 aa17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 Lsm14bQ8CGC4 385 aaKnown RBP17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 Zkscan3Q91VW9 553 aa17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 Kif17Q99PW8 1038 aa17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 Arl2bpQ9D385 163 aa17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 Mzb1Q9D8I1 188 aa17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 Smco2Q9DA21 347 aa17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 Add1Q9QYC0 735 aaKnown RBP17.98■□□□□ 0.47
Shh-201ENSMUST00000002708 GabreA2AMW3 916 aa17.97■□□□□ 0.47
Shh-201ENSMUST00000002708 MtrA6H5Y3 1253 aa17.97■□□□□ 0.47
Shh-201ENSMUST00000002708 Nedd1P33215 660 aa17.97■□□□□ 0.47
Shh-201ENSMUST00000002708 Igf2bp2Q5SF07 592 aaKnown RBP17.97■□□□□ 0.47
Shh-201ENSMUST00000002708 Cog5Q8C0L8 829 aa17.97■□□□□ 0.47
Shh-201ENSMUST00000002708 Eif3hQ91WK2 352 aaKnown RBP17.97■□□□□ 0.47
Shh-201ENSMUST00000002708 MycbpQ9EQS3 103 aa17.97■□□□□ 0.47
Shh-201ENSMUST00000002708 Slc40a1Q9JHI9 570 aa17.97■□□□□ 0.47
Shh-201ENSMUST00000002708 Klra10Q9R1G6 266 aa17.97■□□□□ 0.47
Shh-201ENSMUST00000002708 Myh10Q61879 1976 aaKnown RBP17.97■□□□□ 0.47
Shh-201ENSMUST00000002708 Fam129cD3YZB0 591 aa17.97■□□□□ 0.47
Shh-201ENSMUST00000002708 Mroh8E9PYI4 1049 aa17.97■□□□□ 0.47
Shh-201ENSMUST00000002708 Kiaa0319Q5SZV5 1081 aa17.97■□□□□ 0.47
Shh-201ENSMUST00000002708 Hoxa13Q62424 386 aa17.97■□□□□ 0.47
Shh-201ENSMUST00000002708 Naa35Q6PHQ8 725 aa17.97■□□□□ 0.47
Shh-201ENSMUST00000002708 Mettl13Q91YR5 698 aa17.97■□□□□ 0.47
Shh-201ENSMUST00000002708 Ly75Q60767 1723 aa17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 Nfxl1E9Q8I7 918 aaKnown RBP17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 AoahO35298 574 aa17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 Clcn6O35454 870 aa17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 Pcdha4O88689 947 aa17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 Myo1fP70248 1099 aa17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 Hnrnph2P70333 449 aaKnown RBP17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 Muc3aQ3U5A2 218 aa17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 Kctd16Q5DTY9 427 aa17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 Mybpc2Q5XKE0 1136 aa17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 Tshz2Q68FE9 1030 aa17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 Haus1Q8BHX1 278 aa17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 Riox2Q8CD15 465 aa17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 Dnajc28Q8VCE1 385 aa17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 Rfc4Q99J62 364 aa17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 GgcxQ9QYC7 757 aa17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 EmcnQ9R0H2 261 aa17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 Ttc13A0A1L1SSC7 844 aa17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 Lrig2Q52KR2 1054 aa17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 Asap3Q5U464 904 aa17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 Erlin2Q8BFZ9 340 aa17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 MslnlQ8C160 685 aa17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 Spats2Q8K1N4 545 aaKnown RBP17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 Cgref1Q8R1U2 281 aa17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 Nap1l5Q9JJF0 156 aa17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 Azi2Q9QYP6 405 aa17.96■□□□□ 0.47
Shh-201ENSMUST00000002708 Btaf1E9QAE3 1848 aa17.95■□□□□ 0.46
Shh-201ENSMUST00000002708 Apol10bG3X9K7 334 aa17.95■□□□□ 0.46
Shh-201ENSMUST00000002708 Gdap1O88741 358 aa17.95■□□□□ 0.46
Shh-201ENSMUST00000002708 Mpp3O88910 568 aa17.95■□□□□ 0.46
Shh-201ENSMUST00000002708 Gas8Q60779 478 aa17.95■□□□□ 0.46
Shh-201ENSMUST00000002708 Drd5Q8BLD9 478 aa17.95■□□□□ 0.46
Shh-201ENSMUST00000002708 Scfd1Q8BRF7 639 aaKnown RBP17.95■□□□□ 0.46
Shh-201ENSMUST00000002708 Yars2Q8BYL4 472 aaKnown RBP17.95■□□□□ 0.46
Shh-201ENSMUST00000002708 Pak2Q8CIN4 524 aa17.95■□□□□ 0.46
Shh-201ENSMUST00000002708 Klc4Q9DBS5 619 aa17.95■□□□□ 0.46
Shh-201ENSMUST00000002708 Kcnh2O35219 1162 aa17.95■□□□□ 0.46
Shh-201ENSMUST00000002708 Hnrnph1O35737 449 aaKnown RBP17.95■□□□□ 0.46
Shh-201ENSMUST00000002708 ProcP33587 460 aa17.95■□□□□ 0.46
Shh-201ENSMUST00000002708 Depdc1aQ8CIG0 804 aa17.95■□□□□ 0.46
Shh-201ENSMUST00000002708 Smc6Q924W5 1097 aa17.95■□□□□ 0.46
Shh-201ENSMUST00000002708 Erp44Q9D1Q6 406 aa17.95■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 164 ms