RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 F13A1P00488 732 aa14.91□□□□□ -0.02
GTF3A-209ENST00000640289 TXKP42681 527 aa14.91□□□□□ -0.02
GTF3A-209ENST00000640289 ATN1P54259 1190 aaPredicted RBP14.91□□□□□ -0.02
GTF3A-209ENST00000640289 CHMP4BP1P59074 171 aa14.91□□□□□ -0.02
GTF3A-209ENST00000640289 B3GNT9Q6UX72 402 aa14.91□□□□□ -0.02
GTF3A-209ENST00000640289 C4orf32Q8N8J7 132 aa14.91□□□□□ -0.02
GTF3A-209ENST00000640289 VTI1AQ96AJ9 217 aa14.91□□□□□ -0.02
GTF3A-209ENST00000640289 FAM20AQ96MK3 541 aa14.91□□□□□ -0.02
GTF3A-209ENST00000640289 GLT1D1Q96MS3 346 aa14.91□□□□□ -0.02
GTF3A-209ENST00000640289 MTMR9Q96QG7 549 aa14.91□□□□□ -0.02
GTF3A-209ENST00000640289 PCYT2Q99447 389 aa14.91□□□□□ -0.02
GTF3A-209ENST00000640289 C16orf70Q9BSU1 422 aa14.91□□□□□ -0.02
GTF3A-209ENST00000640289 MTG1Q9BT17 334 aaPredicted RBP14.91□□□□□ -0.02
GTF3A-209ENST00000640289 FTOQ9C0B1 505 aaKnown RBP eCLIP14.91□□□□□ -0.02
GTF3A-209ENST00000640289 ZSCAN16Q9H4T2 348 aaPredicted RBP14.91□□□□□ -0.02
GTF3A-209ENST00000640289 VAV3Q9UKW4 847 aa14.91□□□□□ -0.02
GTF3A-209ENST00000640289 ZDHHC9Q9Y397 364 aa14.91□□□□□ -0.02
GTF3A-209ENST00000640289 KPNA6O60684 536 aa14.9□□□□□ -0.02
GTF3A-209ENST00000640289 ATG7O95352 703 aa14.9□□□□□ -0.02
GTF3A-209ENST00000640289 BAG4O95429 457 aaKnown RBP14.9□□□□□ -0.02
GTF3A-209ENST00000640289 BRD1O95696 1058 aa14.9□□□□□ -0.02
GTF3A-209ENST00000640289 OR52Z1P0C646 297 aa14.9□□□□□ -0.02
GTF3A-209ENST00000640289 PDIA4P13667 645 aaKnown RBP14.9□□□□□ -0.02
GTF3A-209ENST00000640289 KRT76Q01546 638 aa14.9□□□□□ -0.02
GTF3A-209ENST00000640289 PTGDRQ13258 359 aa14.9□□□□□ -0.02
GTF3A-209ENST00000640289 ORC2Q13416 577 aaPredicted RBP14.9□□□□□ -0.02
GTF3A-209ENST00000640289 ZNF746Q6NUN9 644 aaPredicted RBP14.9□□□□□ -0.02
GTF3A-209ENST00000640289 ABHD15Q6UXT9 468 aa14.9□□□□□ -0.02
GTF3A-209ENST00000640289 SLC39A5Q6ZMH5 540 aa14.9□□□□□ -0.02
GTF3A-209ENST00000640289 SLFN12Q8IYM2 578 aa14.9□□□□□ -0.02
GTF3A-209ENST00000640289 TCEAL9Q9UHQ7 104 aa14.9□□□□□ -0.02
GTF3A-209ENST00000640289 DOCK5Q9H7D0 1870 aa14.9□□□□□ -0.02
GTF3A-209ENST00000640289 GRIN2DO15399 1336 aa14.9□□□□□ -0.02
GTF3A-209ENST00000640289 EML1O00423 815 aa14.89□□□□□ -0.03
GTF3A-209ENST00000640289 CABYRO75952 493 aa14.89□□□□□ -0.03
GTF3A-209ENST00000640289 F2P00734 622 aa14.89□□□□□ -0.03
GTF3A-209ENST00000640289 SUPT20HL2P0C7V6 817 aa14.89□□□□□ -0.03
GTF3A-209ENST00000640289 DDIT3P35638 169 aa14.89□□□□□ -0.03
GTF3A-209ENST00000640289 PSEN2P49810 448 aa14.89□□□□□ -0.03
GTF3A-209ENST00000640289 SPIRE1Q08AE8 756 aa14.89□□□□□ -0.03
GTF3A-209ENST00000640289 SF3A1Q15459 793 aaKnown RBP14.89□□□□□ -0.03
GTF3A-209ENST00000640289 LRRC26Q2I0M4 334 aa14.89□□□□□ -0.03
GTF3A-209ENST00000640289 FOXD4L6Q3SYB3 417 aaPredicted RBP14.89□□□□□ -0.03
GTF3A-209ENST00000640289 FOXD4L3Q6VB84 417 aaPredicted RBP14.89□□□□□ -0.03
GTF3A-209ENST00000640289 MIER3Q7Z3K6 550 aa14.89□□□□□ -0.03
GTF3A-209ENST00000640289 CCDC60Q8IWA6 550 aaPredicted RBP14.89□□□□□ -0.03
GTF3A-209ENST00000640289 TTC12Q9H892 705 aaPredicted RBP14.89□□□□□ -0.03
GTF3A-209ENST00000640289 DISC1Q9NRI5 854 aa14.89□□□□□ -0.03
GTF3A-209ENST00000640289 DAXXQ9UER7 740 aaPredicted RBP14.89□□□□□ -0.03
GTF3A-209ENST00000640289 SAMM50Q9Y512 469 aa14.89□□□□□ -0.03
GTF3A-209ENST00000640289 PCDHA10Q9Y5I2 948 aa14.89□□□□□ -0.03
GTF3A-209ENST00000640289 CLIC4Q9Y696 253 aa14.89□□□□□ -0.03
GTF3A-209ENST00000640289 KIAA0100Q14667 2235 aaKnown RBP14.89□□□□□ -0.03
GTF3A-209ENST00000640289 IGKV6D-21A0A0A0MT36 114 aa14.88□□□□□ -0.03
GTF3A-209ENST00000640289 A0A0U1RQG5 324 aaPredicted RBP14.88□□□□□ -0.03
GTF3A-209ENST00000640289 WDR64B1ANS9 1081 aa14.88□□□□□ -0.03
GTF3A-209ENST00000640289 H3BRB1 525 aa14.88□□□□□ -0.03
GTF3A-209ENST00000640289 HAS3O00219 553 aa14.88□□□□□ -0.03
GTF3A-209ENST00000640289 BACH1O14867 736 aa14.88□□□□□ -0.03
GTF3A-209ENST00000640289 LGR5O75473 907 aa14.88□□□□□ -0.03
GTF3A-209ENST00000640289 MARK3P27448 753 aa14.88□□□□□ -0.03
GTF3A-209ENST00000640289 CEBPZQ03701 1054 aaKnown RBP14.88□□□□□ -0.03
GTF3A-209ENST00000640289 PPP2R5CQ13362 524 aa14.88□□□□□ -0.03
GTF3A-209ENST00000640289 ITGA7Q13683 1181 aa14.88□□□□□ -0.03
GTF3A-209ENST00000640289 MFSD10Q14728 455 aa14.88□□□□□ -0.03
GTF3A-209ENST00000640289 KIAA0753Q2KHM9 967 aa14.88□□□□□ -0.03
GTF3A-209ENST00000640289 NBPF20Q3BBV1 942 aa14.88□□□□□ -0.03
GTF3A-209ENST00000640289 NCAPH2Q6IBW4 605 aa14.88□□□□□ -0.03
GTF3A-209ENST00000640289 SWSAP1Q6NVH7 229 aa14.88□□□□□ -0.03
GTF3A-209ENST00000640289 MIS18BP1Q6P0N0 1132 aa14.88□□□□□ -0.03
GTF3A-209ENST00000640289 SMAP1Q8IYB5 467 aaPredicted RBP14.88□□□□□ -0.03
GTF3A-209ENST00000640289 GLG1Q92896 1179 aa14.88□□□□□ -0.03
GTF3A-209ENST00000640289 USP28Q96RU2 1077 aa14.88□□□□□ -0.03
GTF3A-209ENST00000640289 TUT1Q9H6E5 874 aaKnown RBP14.88□□□□□ -0.03
GTF3A-209ENST00000640289 PCDHA12Q9UN75 941 aa14.88□□□□□ -0.03
GTF3A-209ENST00000640289 EMSYQ7Z589 1322 aa14.88□□□□□ -0.03
GTF3A-209ENST00000640289 POTEMA6NI47 508 aa14.87□□□□□ -0.03
GTF3A-209ENST00000640289 PSAPP07602 524 aa14.87□□□□□ -0.03
GTF3A-209ENST00000640289 TECP42680 631 aa14.87□□□□□ -0.03
GTF3A-209ENST00000640289 STAT5BP51692 787 aa14.87□□□□□ -0.03
GTF3A-209ENST00000640289 JAK3P52333 1124 aa14.87□□□□□ -0.03
GTF3A-209ENST00000640289 ATP2C1P98194 919 aaPredicted RBP14.87□□□□□ -0.03
GTF3A-209ENST00000640289 IL17AQ16552 155 aa14.87□□□□□ -0.03
GTF3A-209ENST00000640289 SLC43A3Q8NBI5 491 aa14.87□□□□□ -0.03
GTF3A-209ENST00000640289 KATNAL1Q9BW62 490 aa14.87□□□□□ -0.03
GTF3A-209ENST00000640289 RNPEPQ9H4A4 650 aa14.87□□□□□ -0.03
GTF3A-209ENST00000640289 SMARCAD1Q9H4L7 1026 aa14.87□□□□□ -0.03
GTF3A-209ENST00000640289 AZI2Q9H6S1 392 aa14.87□□□□□ -0.03
GTF3A-209ENST00000640289 ZNF302Q9NR11 478 aa14.87□□□□□ -0.03
GTF3A-209ENST00000640289 GABBR1Q9UBS5 961 aa14.87□□□□□ -0.03
GTF3A-209ENST00000640289 ARVCFO00192 962 aa14.86□□□□□ -0.03
GTF3A-209ENST00000640289 ATP4AP20648 1035 aa14.86□□□□□ -0.03
GTF3A-209ENST00000640289 SFNP31947 248 aa14.86□□□□□ -0.03
GTF3A-209ENST00000640289 RTP1P59025 263 aa14.86□□□□□ -0.03
GTF3A-209ENST00000640289 SNX17Q15036 470 aa14.86□□□□□ -0.03
GTF3A-209ENST00000640289 PTPAQ15257 358 aa14.86□□□□□ -0.03
GTF3A-209ENST00000640289 UGCGQ16739 394 aa14.86□□□□□ -0.03
GTF3A-209ENST00000640289 TRIM60Q495X7 471 aa14.86□□□□□ -0.03
GTF3A-209ENST00000640289 FAM47CQ5HY64 1035 aa14.86□□□□□ -0.03
GTF3A-209ENST00000640289 BANK1Q8NDB2 785 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms