RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 FCRL3Q96P31 734 aaPredicted RBP4.36□□□□□ -1.71
CCDC7-213ENST00000639290 TMEM9BQ9NQ34 198 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 DBR1Q9UK59 544 aaKnown RBP4.36□□□□□ -1.71
CCDC7-213ENST00000639290 NOD1Q9Y239 953 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 ABCA2Q9BZC7 2435 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 ASTN1O14525 1302 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 EIF5BO60841 1220 aaKnown RBP4.36□□□□□ -1.71
CCDC7-213ENST00000639290 VCAM1P19320 739 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 PURAQ00577 322 aaKnown RBP4.36□□□□□ -1.71
CCDC7-213ENST00000639290 PFKPQ01813 784 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 CAVIN4Q5BKX8 364 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 AXDND1Q5T1B0 1012 aaPredicted RBP4.36□□□□□ -1.71
CCDC7-213ENST00000639290 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.36□□□□□ -1.71
CCDC7-213ENST00000639290 CCDC149Q6ZUS6 474 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 PIP4P1Q86T03 277 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 MYOCDQ8IZQ8 938 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 POF1BQ8WVV4 589 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 CHRDQ9H2X0 955 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 LTB4R2Q9NPC1 389 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 ZBTB21Q9ULJ3 1066 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 VPS9D1Q9Y2B5 631 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 MAN2B2Q9Y2E5 1009 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 HEMK1Q9Y5R4 338 aaPredicted RBP4.36□□□□□ -1.71
CCDC7-213ENST00000639290 MYO10Q9HD67 2058 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 COL6A6A6NMZ7 2263 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 ARP10275 920 aa4.35□□□□□ -1.71
CCDC7-213ENST00000639290 ADRA1BP35368 520 aa4.35□□□□□ -1.71
CCDC7-213ENST00000639290 UCNP55089 124 aa4.35□□□□□ -1.71
CCDC7-213ENST00000639290 SF3A2Q15428 464 aaKnown RBP4.35□□□□□ -1.71
CCDC7-213ENST00000639290 GRIK5Q16478 980 aa4.35□□□□□ -1.71
CCDC7-213ENST00000639290 ATG14Q6ZNE5 492 aa4.35□□□□□ -1.71
CCDC7-213ENST00000639290 CACNA2D4Q7Z3S7 1137 aa4.35□□□□□ -1.71
CCDC7-213ENST00000639290 FOXP4Q8IVH2 680 aaPredicted RBP4.35□□□□□ -1.71
CCDC7-213ENST00000639290 STAMQ92783 540 aa4.35□□□□□ -1.71
CCDC7-213ENST00000639290 KCTD12Q96CX2 325 aaKnown RBP4.35□□□□□ -1.71
CCDC7-213ENST00000639290 ZC3H10Q96K80 434 aaKnown RBP4.35□□□□□ -1.71
CCDC7-213ENST00000639290 REPIN1Q9BWE0 567 aaKnown RBP4.35□□□□□ -1.71
CCDC7-213ENST00000639290 CHMP4AQ9BY43 222 aa4.35□□□□□ -1.71
CCDC7-213ENST00000639290 AAASQ9NRG9 546 aa4.35□□□□□ -1.71
CCDC7-213ENST00000639290 CA14Q9ULX7 337 aa4.35□□□□□ -1.71
CCDC7-213ENST00000639290 PARP14Q460N5 1801 aa4.35□□□□□ -1.71
CCDC7-213ENST00000639290 LOXHD1Q8IVV2 1947 aa4.35□□□□□ -1.71
CCDC7-213ENST00000639290 GOLGA8CPA6NN73 597 aa4.35□□□□□ -1.71
CCDC7-213ENST00000639290 NKRFO15226 690 aaKnown RBP eCLIP4.35□□□□□ -1.71
CCDC7-213ENST00000639290 PAPLNO95428 1278 aa4.35□□□□□ -1.71
CCDC7-213ENST00000639290 CKBP12277 381 aa4.35□□□□□ -1.71
CCDC7-213ENST00000639290 BMP3P12645 472 aa4.35□□□□□ -1.71
CCDC7-213ENST00000639290 ADSSP30520 456 aa4.35□□□□□ -1.71
CCDC7-213ENST00000639290 DPP6P42658 865 aa4.35□□□□□ -1.71
CCDC7-213ENST00000639290 MLF2Q15773 248 aaPredicted RBP4.35□□□□□ -1.71
CCDC7-213ENST00000639290 TAF1BQ53T94 588 aaPredicted RBP4.35□□□□□ -1.71
CCDC7-213ENST00000639290 SPATA3Q8NHX4 192 aa4.35□□□□□ -1.71
CCDC7-213ENST00000639290 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.35□□□□□ -1.71
CCDC7-213ENST00000639290 COG6Q9Y2V7 657 aa4.35□□□□□ -1.71
CCDC7-213ENST00000639290 UBR5O95071 2799 aaPredicted RBP4.35□□□□□ -1.71
CCDC7-213ENST00000639290 SIPA1L1O43166 1804 aa4.34□□□□□ -1.71
CCDC7-213ENST00000639290 ADCY6O43306 1168 aa4.34□□□□□ -1.71
CCDC7-213ENST00000639290 B4GALT3O60512 393 aa4.34□□□□□ -1.71
CCDC7-213ENST00000639290 DDX58O95786 925 aaKnown RBP4.34□□□□□ -1.71
CCDC7-213ENST00000639290 BEX3Q00994 111 aa4.34□□□□□ -1.71
CCDC7-213ENST00000639290 MCM6Q14566 821 aa4.34□□□□□ -1.71
CCDC7-213ENST00000639290 TRAF7Q6Q0C0 670 aa4.34□□□□□ -1.71
CCDC7-213ENST00000639290 FMNL3Q8IVF7 1028 aa4.34□□□□□ -1.71
CCDC7-213ENST00000639290 SLC44A3Q8N4M1 653 aa4.34□□□□□ -1.71
CCDC7-213ENST00000639290 FAM26EQ8N5C1 309 aa4.34□□□□□ -1.71
CCDC7-213ENST00000639290 ZNF428Q96B54 188 aa4.34□□□□□ -1.71
CCDC7-213ENST00000639290 IFIH1Q9BYX4 1025 aaKnown RBP4.34□□□□□ -1.71
CCDC7-213ENST00000639290 KIAA1522Q9P206 1035 aaPredicted RBP4.34□□□□□ -1.71
CCDC7-213ENST00000639290 PI4KBQ9UBF8 816 aa4.34□□□□□ -1.71
CCDC7-213ENST00000639290 MUC22E2RYF6 1773 aaPredicted RBP4.34□□□□□ -1.71
CCDC7-213ENST00000639290 DNHD1Q96M86 4753 aa4.34□□□□□ -1.71
CCDC7-213ENST00000639290 CFAP46Q8IYW2 2715 aa4.34□□□□□ -1.71
CCDC7-213ENST00000639290 DSPP15924 2871 aaKnown RBP4.34□□□□□ -1.71
CCDC7-213ENST00000639290 CARNS1A5YM72 827 aa4.34□□□□□ -1.72
CCDC7-213ENST00000639290 ASB14A6NK59 587 aa4.34□□□□□ -1.72
CCDC7-213ENST00000639290 C4orf47A7E2U8 309 aa4.34□□□□□ -1.72
CCDC7-213ENST00000639290 PATL2C9JE40 543 aaKnown RBP4.34□□□□□ -1.72
CCDC7-213ENST00000639290 RRP8O43159 456 aaKnown RBP4.34□□□□□ -1.72
CCDC7-213ENST00000639290 DNAJB1P25685 340 aa4.34□□□□□ -1.72
CCDC7-213ENST00000639290 MPLP40238 635 aa4.34□□□□□ -1.72
CCDC7-213ENST00000639290 MLLT3P42568 568 aaPredicted RBP4.34□□□□□ -1.72
CCDC7-213ENST00000639290 PSMC6P62333 389 aa4.34□□□□□ -1.72
CCDC7-213ENST00000639290 PTGISQ16647 500 aa4.34□□□□□ -1.72
CCDC7-213ENST00000639290 TCTN1Q2MV58 587 aa4.34□□□□□ -1.72
CCDC7-213ENST00000639290 C11orf74Q86VG3 221 aa4.34□□□□□ -1.72
CCDC7-213ENST00000639290 VPS37DQ86XT2 251 aa4.34□□□□□ -1.72
CCDC7-213ENST00000639290 GPR152Q8TDT2 470 aa4.34□□□□□ -1.72
CCDC7-213ENST00000639290 BAP1Q92560 729 aa4.34□□□□□ -1.72
CCDC7-213ENST00000639290 PCMTD1Q96MG8 357 aaPredicted RBP4.34□□□□□ -1.72
CCDC7-213ENST00000639290 METTL22Q9BUU2 404 aaPredicted RBP4.34□□□□□ -1.72
CCDC7-213ENST00000639290 RPAP3Q9H6T3 665 aaPredicted RBP4.34□□□□□ -1.72
CCDC7-213ENST00000639290 TCP11L1Q9NUJ3 509 aa4.34□□□□□ -1.72
CCDC7-213ENST00000639290 SEPT9Q9UHD8 586 aaPredicted RBP4.34□□□□□ -1.72
CCDC7-213ENST00000639290 EVLQ9UI08 416 aaPredicted RBP4.34□□□□□ -1.72
CCDC7-213ENST00000639290 PRR12Q9ULL5 1215 aa4.34□□□□□ -1.72
CCDC7-213ENST00000639290 PDS5AQ29RF7 1337 aaKnown RBP4.33□□□□□ -1.72
CCDC7-213ENST00000639290 PCSK5Q92824 1860 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 ANHXE9PGG2 379 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 PDE4CQ08493 712 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 NOLC1Q14978 699 aaKnown RBP eCLIP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms