RNA–Protein interactions for RNA: ENST00000639276.1

NECAP1-217, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-217ENST00000639276 EMILIN3Q9NT22 766 aa9.92□□□□□ -0.82
NECAP1-217ENST00000639276 PSMD10O75832 226 aa9.91□□□□□ -0.82
NECAP1-217ENST00000639276 TFRCP02786 760 aaKnown RBP9.91□□□□□ -0.82
NECAP1-217ENST00000639276 ALAS1P13196 640 aa9.91□□□□□ -0.82
NECAP1-217ENST00000639276 CASQ1P31415 396 aa9.91□□□□□ -0.82
NECAP1-217ENST00000639276 PPP1R2P41236 205 aa9.91□□□□□ -0.82
NECAP1-217ENST00000639276 KCNA1Q09470 495 aa9.91□□□□□ -0.82
NECAP1-217ENST00000639276 TRIM14Q14142 442 aa9.91□□□□□ -0.82
NECAP1-217ENST00000639276 CEP55Q53EZ4 464 aa9.91□□□□□ -0.82
NECAP1-217ENST00000639276 MCTP2Q6DN12 878 aa9.91□□□□□ -0.82
NECAP1-217ENST00000639276 SFR1Q86XK3 245 aa9.91□□□□□ -0.82
NECAP1-217ENST00000639276 SMCR8Q8TEV9 937 aaPredicted RBP9.91□□□□□ -0.82
NECAP1-217ENST00000639276 CLEC4DQ8WXI8 215 aa9.91□□□□□ -0.82
NECAP1-217ENST00000639276 UPF1Q92900 1129 aaKnown RBP eCLIP9.91□□□□□ -0.824e-7■■■□□ 15.7
NECAP1-217ENST00000639276 HSD17B14Q9BPX1 270 aa9.91□□□□□ -0.82
NECAP1-217ENST00000639276 SGIP1Q9BQI5 828 aa9.91□□□□□ -0.82
NECAP1-217ENST00000639276 SH2D4AQ9H788 454 aa9.91□□□□□ -0.82
NECAP1-217ENST00000639276 ATAD5Q96QE3 1844 aa9.91□□□□□ -0.82
NECAP1-217ENST00000639276 RRP9O43818 475 aaKnown RBP9.91□□□□□ -0.82
NECAP1-217ENST00000639276 FLOT1O75955 427 aa9.91□□□□□ -0.82
NECAP1-217ENST00000639276 PLEKP08567 350 aaPredicted RBP9.91□□□□□ -0.82
NECAP1-217ENST00000639276 MYBP10242 640 aa9.91□□□□□ -0.82
NECAP1-217ENST00000639276 ITGB5P18084 799 aa9.91□□□□□ -0.82
NECAP1-217ENST00000639276 HOXD13P35453 343 aa9.91□□□□□ -0.82
NECAP1-217ENST00000639276 LRRC63Q05C16 580 aa9.91□□□□□ -0.82
NECAP1-217ENST00000639276 SPP2Q13103 211 aa9.91□□□□□ -0.82
NECAP1-217ENST00000639276 ERMNQ8TAM6 284 aa9.91□□□□□ -0.82
NECAP1-217ENST00000639276 CARD6Q9BX69 1037 aa9.91□□□□□ -0.82
NECAP1-217ENST00000639276 WDR11Q9BZH6 1224 aa9.91□□□□□ -0.82
NECAP1-217ENST00000639276 KCTD10Q9H3F6 313 aa9.91□□□□□ -0.82
NECAP1-217ENST00000639276 EPN1Q9Y6I3 576 aaPredicted RBP9.91□□□□□ -0.82
NECAP1-217ENST00000639276 PCNTO95613 3336 aa9.91□□□□□ -0.82
NECAP1-217ENST00000639276 FRMD3A2A2Y4 597 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 FZD9O00144 591 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 PLA2G6O60733 806 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 PRPF6O94906 941 aaKnown RBP9.9□□□□□ -0.82
NECAP1-217ENST00000639276 NDUFA10O95299 355 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 ICAM1P05362 532 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 VCAM1P19320 739 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 ARHGAP25P42331 645 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 ZNF569Q5MCW4 686 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 ANGEL2Q5VTE6 544 aaKnown RBP9.9□□□□□ -0.82
NECAP1-217ENST00000639276 TRMT1LQ7Z2T5 733 aaKnown RBP9.9□□□□□ -0.82
NECAP1-217ENST00000639276 PRPF38AQ8NAV1 312 aaKnown RBP9.9□□□□□ -0.82
NECAP1-217ENST00000639276 TRPM4Q8TD43 1214 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 ERGIC2Q96RQ1 377 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 ZNF577Q9BSK1 485 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 EPC1Q9H2F5 836 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 UNC45AQ9H3U1 944 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 MMRN2Q9H8L6 949 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 SIK3Q9Y2K2 1263 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 GAS7O60861 476 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 FKBP3Q00688 224 aaKnown RBP9.9□□□□□ -0.82
NECAP1-217ENST00000639276 KCNMA1Q12791 1236 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 TNFAIP1Q13829 316 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 PRKG1Q13976 671 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 FKBP15Q5T1M5 1219 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 KSR1Q8IVT5 923 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 PDCL2Q8N4E4 241 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 BANK1Q8NDB2 785 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 SLC5A5Q92911 643 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 ERO1AQ96HE7 468 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 TSG101Q99816 390 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 CRACR2AQ9BSW2 395 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 GTPBP4Q9BZE4 634 aaKnown RBP9.9□□□□□ -0.82
NECAP1-217ENST00000639276 PDCL3Q9H2J4 239 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 RABGAP1Q9Y3P9 1069 aa9.9□□□□□ -0.82
NECAP1-217ENST00000639276 GOLGA6L9A6NEM1 432 aa9.89□□□□□ -0.83
NECAP1-217ENST00000639276 CTNND1O60716 968 aaKnown RBP9.89□□□□□ -0.83
NECAP1-217ENST00000639276 RPS12P25398 132 aaKnown RBP9.89□□□□□ -0.83
NECAP1-217ENST00000639276 HSD17B4P51659 736 aa9.89□□□□□ -0.83
NECAP1-217ENST00000639276 CYP27A1Q02318 531 aa9.89□□□□□ -0.83
NECAP1-217ENST00000639276 MAN2A1Q16706 1144 aa9.89□□□□□ -0.83
NECAP1-217ENST00000639276 CCDC40Q4G0X9 1142 aa9.89□□□□□ -0.83
NECAP1-217ENST00000639276 RINT1Q6NUQ1 792 aa9.89□□□□□ -0.83
NECAP1-217ENST00000639276 SH2D3AQ9BRG2 576 aa9.89□□□□□ -0.83
NECAP1-217ENST00000639276 POLR3CQ9BUI4 534 aaPredicted RBP9.89□□□□□ -0.83
NECAP1-217ENST00000639276 KIAA1683Q9H0B3 1180 aa9.89□□□□□ -0.83
NECAP1-217ENST00000639276 RPAP3Q9H6T3 665 aaPredicted RBP9.89□□□□□ -0.83
NECAP1-217ENST00000639276 RIPK3Q9Y572 518 aa9.89□□□□□ -0.83
NECAP1-217ENST00000639276 COL4A3BPQ9Y5P4 624 aa9.89□□□□□ -0.83
NECAP1-217ENST00000639276 RCCD1A6NED2 376 aa9.89□□□□□ -0.83
NECAP1-217ENST00000639276 IPO5O00410 1097 aaKnown RBP9.89□□□□□ -0.83
NECAP1-217ENST00000639276 WDR46O15213 610 aaKnown RBP9.89□□□□□ -0.83
NECAP1-217ENST00000639276 TUBB4AP04350 444 aa9.89□□□□□ -0.83
NECAP1-217ENST00000639276 HERVK_113P62684 666 aa9.89□□□□□ -0.83
NECAP1-217ENST00000639276 ADAM9Q13443 819 aa9.89□□□□□ -0.83
NECAP1-217ENST00000639276 ARHGAP29Q52LW3 1261 aa9.89□□□□□ -0.83
NECAP1-217ENST00000639276 SLC35F6Q8N357 371 aa9.89□□□□□ -0.83
NECAP1-217ENST00000639276 TAAR1Q96RJ0 339 aa9.89□□□□□ -0.83
NECAP1-217ENST00000639276 NHEJ1Q9H9Q4 299 aaPredicted RBP9.89□□□□□ -0.83
NECAP1-217ENST00000639276 GUCA1BQ9UMX6 200 aa9.89□□□□□ -0.83
NECAP1-217ENST00000639276 PITPNM2Q9BZ72 1349 aa9.89□□□□□ -0.83
NECAP1-217ENST00000639276 EYA4O95677 639 aa9.88□□□□□ -0.83
NECAP1-217ENST00000639276 EIF2AK2P19525 551 aaKnown RBP9.88□□□□□ -0.83
NECAP1-217ENST00000639276 MAP3K9P80192 1104 aa9.88□□□□□ -0.83
NECAP1-217ENST00000639276 MRPS9P82933 396 aaKnown RBP9.88□□□□□ -0.83
NECAP1-217ENST00000639276 ZBED6P86452 979 aa9.88□□□□□ -0.83
NECAP1-217ENST00000639276 TRAF1Q13077 416 aa9.88□□□□□ -0.83
NECAP1-217ENST00000639276 PPP2R5CQ13362 524 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms