RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 RABGGTBP53611 331 aa19.12■□□□□ 0.65
CACNA1A-259ENST00000638114 ARHGAP4P98171 946 aa19.12■□□□□ 0.65
CACNA1A-259ENST00000638114 CEP55Q53EZ4 464 aa19.12■□□□□ 0.65
CACNA1A-259ENST00000638114 ZNF618Q5T7W0 954 aa19.12■□□□□ 0.65
CACNA1A-259ENST00000638114 SERINC5Q86VE9 423 aa19.12■□□□□ 0.65
CACNA1A-259ENST00000638114 REXO1Q8N1G1 1221 aaKnown RBP19.12■□□□□ 0.65
CACNA1A-259ENST00000638114 SDF4Q9BRK5 362 aa19.12■□□□□ 0.65
CACNA1A-259ENST00000638114 JPH1Q9HDC5 661 aaPredicted RBP19.12■□□□□ 0.65
CACNA1A-259ENST00000638114 SETD4Q9NVD3 440 aa19.12■□□□□ 0.65
CACNA1A-259ENST00000638114 GSTTP1A0A1W2PQM5 241 aa19.11■□□□□ 0.65
CACNA1A-259ENST00000638114 CPLX1O14810 134 aa19.11■□□□□ 0.65
CACNA1A-259ENST00000638114 ARP10275 920 aa19.11■□□□□ 0.65
CACNA1A-259ENST00000638114 GNA11P29992 359 aa19.11■□□□□ 0.65
CACNA1A-259ENST00000638114 HOXC8P31273 242 aa19.11■□□□□ 0.65
CACNA1A-259ENST00000638114 THPOP40225 353 aa19.11■□□□□ 0.65
CACNA1A-259ENST00000638114 STK3Q13188 491 aa19.11■□□□□ 0.65
CACNA1A-259ENST00000638114 GPNMBQ14956 572 aa19.11■□□□□ 0.65
CACNA1A-259ENST00000638114 GRIN2CQ14957 1233 aa19.11■□□□□ 0.65
CACNA1A-259ENST00000638114 TRIM22Q8IYM9 498 aa19.11■□□□□ 0.65
CACNA1A-259ENST00000638114 CCDC148Q8NFR7 591 aa19.11■□□□□ 0.65
CACNA1A-259ENST00000638114 GLG1Q92896 1179 aa19.11■□□□□ 0.65
CACNA1A-259ENST00000638114 ZNF274Q96GC6 653 aaPredicted RBP19.11■□□□□ 0.65
CACNA1A-259ENST00000638114 NKX2-4Q9H2Z4 354 aa19.11■□□□□ 0.65
CACNA1A-259ENST00000638114 SLC9A2Q9UBY0 812 aa19.11■□□□□ 0.65
CACNA1A-259ENST00000638114 ADAMTS3O15072 1205 aa19.1■□□□□ 0.65
CACNA1A-259ENST00000638114 NBNO60934 754 aa19.1■□□□□ 0.65
CACNA1A-259ENST00000638114 BAIAP3O94812 1187 aa19.1■□□□□ 0.65
CACNA1A-259ENST00000638114 FOSL2P15408 326 aa19.1■□□□□ 0.65
CACNA1A-259ENST00000638114 MARK3P27448 753 aa19.1■□□□□ 0.65
CACNA1A-259ENST00000638114 MCTP2Q6DN12 878 aa19.1■□□□□ 0.65
CACNA1A-259ENST00000638114 SLC17A8Q8NDX2 589 aa19.1■□□□□ 0.65
CACNA1A-259ENST00000638114 AGO4Q9HCK5 861 aaKnown RBP19.1■□□□□ 0.65
CACNA1A-259ENST00000638114 VPS54Q9P1Q0 977 aa19.1■□□□□ 0.65
CACNA1A-259ENST00000638114 YBX2Q9Y2T7 364 aaKnown RBP19.1■□□□□ 0.65
CACNA1A-259ENST00000638114 NFASCO94856 1347 aa19.09■□□□□ 0.65
CACNA1A-259ENST00000638114 KAT6AQ92794 2004 aa19.09■□□□□ 0.65
CACNA1A-259ENST00000638114 MEIS1O00470 390 aa19.09■□□□□ 0.65
CACNA1A-259ENST00000638114 CXCL10P02778 98 aa19.09■□□□□ 0.65
CACNA1A-259ENST00000638114 KCNJ6P48051 423 aa19.09■□□□□ 0.65
CACNA1A-259ENST00000638114 SSRP1Q08945 709 aaKnown RBP19.09■□□□□ 0.65
CACNA1A-259ENST00000638114 CNKSR3Q6P9H4 555 aa19.09■□□□□ 0.65
CACNA1A-259ENST00000638114 TRAF7Q6Q0C0 670 aa19.09■□□□□ 0.65
CACNA1A-259ENST00000638114 PLA2G4DQ86XP0 818 aa19.09■□□□□ 0.65
CACNA1A-259ENST00000638114 BICD2Q8TD16 824 aa19.09■□□□□ 0.65
CACNA1A-259ENST00000638114 RASGRP4Q8TDF6 673 aa19.09■□□□□ 0.65
CACNA1A-259ENST00000638114 LMBR1Q8WVP7 490 aa19.09■□□□□ 0.65
CACNA1A-259ENST00000638114 SLC9A7Q96T83 725 aa19.09■□□□□ 0.65
CACNA1A-259ENST00000638114 SMARCAD1Q9H4L7 1026 aa19.09■□□□□ 0.65
CACNA1A-259ENST00000638114 SLC28A3Q9HAS3 691 aa19.09■□□□□ 0.65
CACNA1A-259ENST00000638114 ERAP1Q9NZ08 941 aa19.09■□□□□ 0.65
CACNA1A-259ENST00000638114 PCDHA11Q9Y5I1 949 aa19.09■□□□□ 0.65
CACNA1A-259ENST00000638114 NRCAMQ92823 1304 aa19.08■□□□□ 0.65
CACNA1A-259ENST00000638114 RSPH10B2B2RC85 870 aa19.08■□□□□ 0.64
CACNA1A-259ENST00000638114 FAM86B1E9PN63 330 aa19.08■□□□□ 0.64
CACNA1A-259ENST00000638114 FAM86B2P0C5J1 330 aa19.08■□□□□ 0.64
CACNA1A-259ENST00000638114 RSPH10BP0C881 870 aa19.08■□□□□ 0.64
CACNA1A-259ENST00000638114 MYOGP15173 224 aa19.08■□□□□ 0.64
CACNA1A-259ENST00000638114 PPFIA1Q13136 1202 aa19.08■□□□□ 0.64
CACNA1A-259ENST00000638114 ITGB3BPQ13352 177 aaPredicted RBP19.08■□□□□ 0.64
CACNA1A-259ENST00000638114 MBTPS1Q14703 1052 aa19.08■□□□□ 0.64
CACNA1A-259ENST00000638114 CPLX2Q6PUV4 134 aaKnown RBP19.08■□□□□ 0.64
CACNA1A-259ENST00000638114 NIPA1Q7RTP0 329 aa19.08■□□□□ 0.64
CACNA1A-259ENST00000638114 AZI2Q9H6S1 392 aa19.08■□□□□ 0.64
CACNA1A-259ENST00000638114 CDH23Q9H251 3354 aa19.08■□□□□ 0.64
CACNA1A-259ENST00000638114 EMSYQ7Z589 1322 aa19.07■□□□□ 0.64
CACNA1A-259ENST00000638114 DDX39AO00148 427 aaKnown RBP19.07■□□□□ 0.64
CACNA1A-259ENST00000638114 CYP3A4P08684 503 aa19.07■□□□□ 0.64
CACNA1A-259ENST00000638114 CTSHP09668 335 aa19.07■□□□□ 0.64
CACNA1A-259ENST00000638114 NLRP5P59047 1200 aa19.07■□□□□ 0.64
CACNA1A-259ENST00000638114 ANAPC15P60006 121 aa19.07■□□□□ 0.64
CACNA1A-259ENST00000638114 ACTR2P61160 394 aa19.07■□□□□ 0.64
CACNA1A-259ENST00000638114 ADAM17P78536 824 aa19.07■□□□□ 0.64
CACNA1A-259ENST00000638114 PPP2R2DQ66LE6 453 aa19.07■□□□□ 0.64
CACNA1A-259ENST00000638114 MAFAQ8NHW3 353 aaPredicted RBP19.07■□□□□ 0.64
CACNA1A-259ENST00000638114 PHOSPHO2Q8TCD6 241 aa19.07■□□□□ 0.64
CACNA1A-259ENST00000638114 CRYGNQ8WXF5 182 aa19.07■□□□□ 0.64
CACNA1A-259ENST00000638114 SH3GLB2Q9NR46 395 aa19.07■□□□□ 0.64
CACNA1A-259ENST00000638114 CHD9Q3L8U1 2897 aa19.07■□□□□ 0.64
CACNA1A-259ENST00000638114 MYO9BQ13459 2157 aa19.06■□□□□ 0.64
CACNA1A-259ENST00000638114 RBAK-RBAKDNI3L0D1 243 aa19.06■□□□□ 0.64
CACNA1A-259ENST00000638114 CAND2O75155 1236 aa19.06■□□□□ 0.64
CACNA1A-259ENST00000638114 LGR5O75473 907 aa19.06■□□□□ 0.64
CACNA1A-259ENST00000638114 DEXIO95424 95 aa19.06■□□□□ 0.64
CACNA1A-259ENST00000638114 WDR5P61964 334 aaKnown RBP19.06■□□□□ 0.64
CACNA1A-259ENST00000638114 TCTN1Q2MV58 587 aa19.06■□□□□ 0.64
CACNA1A-259ENST00000638114 HERC6Q8IVU3 1022 aa19.06■□□□□ 0.64
CACNA1A-259ENST00000638114 UIMC1Q96RL1 719 aa19.06■□□□□ 0.64
CACNA1A-259ENST00000638114 PCYT2Q99447 389 aa19.06■□□□□ 0.64
CACNA1A-259ENST00000638114 PRDM12Q9H4Q4 367 aa19.06■□□□□ 0.64
CACNA1A-259ENST00000638114 IGLV3-22A0A075B6J6 115 aa19.05■□□□□ 0.64
CACNA1A-259ENST00000638114 ABHD14A-ACY1A0A1B0GW23 586 aa19.05■□□□□ 0.64
CACNA1A-259ENST00000638114 EIF5BO60841 1220 aaKnown RBP19.05■□□□□ 0.64
CACNA1A-259ENST00000638114 IGBP1P78318 339 aa19.05■□□□□ 0.64
CACNA1A-259ENST00000638114 SETQ01105 290 aaPredicted RBP19.05■□□□□ 0.64
CACNA1A-259ENST00000638114 IKBKEQ14164 716 aa19.05■□□□□ 0.64
CACNA1A-259ENST00000638114 GRIK4Q16099 956 aa19.05■□□□□ 0.64
CACNA1A-259ENST00000638114 GAS2L1Q99501 681 aaPredicted RBP19.05■□□□□ 0.64
CACNA1A-259ENST00000638114 SLKQ9H2G2 1235 aaPredicted RBP19.05■□□□□ 0.64
CACNA1A-259ENST00000638114 TUBE1Q9UJT0 475 aa19.05■□□□□ 0.64
CACNA1A-259ENST00000638114 TRPC6Q9Y210 931 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms