RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 DGKIO75912 1065 aa2.59□□□□□ -1.99
SCN1A-215ENST00000637285 FBLP22087 321 aaKnown RBP2.59□□□□□ -1.99
SCN1A-215ENST00000637285 KRTAP10-11P60412 298 aa2.59□□□□□ -1.99
SCN1A-215ENST00000637285 FOXL1Q12952 345 aa2.59□□□□□ -1.99
SCN1A-215ENST00000637285 EMC4Q5J8M3 183 aa2.59□□□□□ -1.99
SCN1A-215ENST00000637285 SGMS1Q86VZ5 419 aa2.59□□□□□ -1.99
SCN1A-215ENST00000637285 CRACR2BQ8N4Y2 399 aaPredicted RBP2.59□□□□□ -1.99
SCN1A-215ENST00000637285 BVESQ8NE79 360 aa2.59□□□□□ -1.99
SCN1A-215ENST00000637285 GPR150Q8NGU9 434 aa2.59□□□□□ -1.99
SCN1A-215ENST00000637285 KLHL6Q8WZ60 621 aa2.59□□□□□ -1.99
SCN1A-215ENST00000637285 TACO1Q9BSH4 297 aaKnown RBP2.59□□□□□ -1.99
SCN1A-215ENST00000637285 SMOC1Q9H4F8 434 aa2.59□□□□□ -1.99
SCN1A-215ENST00000637285 CYP26B1Q9NR63 512 aa2.59□□□□□ -1.99
SCN1A-215ENST00000637285 KCND1Q9NSA2 647 aa2.59□□□□□ -1.99
SCN1A-215ENST00000637285 PARPBPQ9NWS1 579 aa2.59□□□□□ -1.99
SCN1A-215ENST00000637285 CEP72Q9P209 647 aa2.59□□□□□ -1.99
SCN1A-215ENST00000637285 PCDHA2Q9Y5H9 948 aa2.59□□□□□ -1.99
SCN1A-215ENST00000637285 A0A1W2PQH9 124 aa2.58□□□□□ -2
SCN1A-215ENST00000637285 ESYT3A0FGR9 886 aa2.58□□□□□ -2
SCN1A-215ENST00000637285 ANKRD34BA5PLL1 514 aa2.58□□□□□ -2
SCN1A-215ENST00000637285 H7BY64 318 aa2.58□□□□□ -2
SCN1A-215ENST00000637285 SLC27A2O14975 620 aa2.58□□□□□ -2
SCN1A-215ENST00000637285 MEFVO15553 781 aaPredicted RBP2.58□□□□□ -2
SCN1A-215ENST00000637285 MAFKO60675 156 aa2.58□□□□□ -2
SCN1A-215ENST00000637285 RPS6KA4O75676 772 aa2.58□□□□□ -2
SCN1A-215ENST00000637285 RPS19P39019 145 aaKnown RBP2.58□□□□□ -2
SCN1A-215ENST00000637285 ECI1P42126 302 aa2.58□□□□□ -2
SCN1A-215ENST00000637285 PFKPQ01813 784 aa2.58□□□□□ -2
SCN1A-215ENST00000637285 HHEXQ03014 270 aa2.58□□□□□ -2
SCN1A-215ENST00000637285 CYP4F3Q08477 520 aa2.58□□□□□ -2
SCN1A-215ENST00000637285 KCNAB2Q13303 367 aa2.58□□□□□ -2
SCN1A-215ENST00000637285 LSAMPQ13449 338 aa2.58□□□□□ -2
SCN1A-215ENST00000637285 PPP2R5EQ16537 467 aa2.58□□□□□ -2
SCN1A-215ENST00000637285 E4F1Q66K89 784 aaPredicted RBP2.58□□□□□ -2
SCN1A-215ENST00000637285 KIAA1211LQ6NV74 962 aa2.58□□□□□ -2
SCN1A-215ENST00000637285 RBM12BQ8IXT5 1001 aaKnown RBP2.58□□□□□ -2
SCN1A-215ENST00000637285 RPUSD2Q8IZ73 545 aaKnown RBP2.58□□□□□ -2
SCN1A-215ENST00000637285 ZNF513Q8N8E2 541 aaPredicted RBP2.58□□□□□ -2
SCN1A-215ENST00000637285 RCBTB1Q8NDN9 531 aa2.58□□□□□ -2
SCN1A-215ENST00000637285 PHOSPHO1Q8TCT1 267 aa2.58□□□□□ -2
SCN1A-215ENST00000637285 APBA2Q99767 749 aa2.58□□□□□ -2
SCN1A-215ENST00000637285 EPB41L1Q9H4G0 881 aa2.58□□□□□ -2
SCN1A-215ENST00000637285 ZNF703Q9H7S9 590 aaPredicted RBP2.58□□□□□ -2
SCN1A-215ENST00000637285 ADARB2Q9NS39 739 aaKnown RBP2.58□□□□□ -2
SCN1A-215ENST00000637285 AURKAIP1Q9NWT8 199 aaPredicted RBP2.58□□□□□ -2
SCN1A-215ENST00000637285 HSPBP1Q9NZL4 362 aa2.58□□□□□ -2
SCN1A-215ENST00000637285 ASH2LQ9UBL3 628 aa2.58□□□□□ -2
SCN1A-215ENST00000637285 ZNHIT2Q9UHR6 403 aa2.58□□□□□ -2
SCN1A-215ENST00000637285 GIT1Q9Y2X7 761 aa2.58□□□□□ -2
SCN1A-215ENST00000637285 CAPN14A8MX76 684 aa2.57□□□□□ -2
SCN1A-215ENST00000637285 MATN2O00339 956 aa2.57□□□□□ -2
SCN1A-215ENST00000637285 KRIT1O00522 736 aa2.57□□□□□ -2
SCN1A-215ENST00000637285 IL18BPO95998 194 aa2.57□□□□□ -2
SCN1A-215ENST00000637285 SNRPB2P08579 225 aaKnown RBP2.57□□□□□ -2
SCN1A-215ENST00000637285 ENO2P09104 434 aaPredicted RBP2.57□□□□□ -2
SCN1A-215ENST00000637285 LCP1P13796 627 aa2.57□□□□□ -2
SCN1A-215ENST00000637285 PDE6AP16499 860 aa2.57□□□□□ -2
SCN1A-215ENST00000637285 ADRA1BP35368 520 aa2.57□□□□□ -2
SCN1A-215ENST00000637285 DUSP8Q13202 625 aa2.57□□□□□ -2
SCN1A-215ENST00000637285 CRHR2Q13324 411 aa2.57□□□□□ -2
SCN1A-215ENST00000637285 ZMAT1Q5H9K5 638 aa2.57□□□□□ -2
SCN1A-215ENST00000637285 EPHA10Q5JZY3 1008 aa2.57□□□□□ -2
SCN1A-215ENST00000637285 DNAJC14Q6Y2X3 702 aaPredicted RBP2.57□□□□□ -2
SCN1A-215ENST00000637285 TMPRSS6Q8IU80 811 aa2.57□□□□□ -2
SCN1A-215ENST00000637285 TRIM59Q8IWR1 403 aa2.57□□□□□ -2
SCN1A-215ENST00000637285 TRIM48Q8IWZ4 208 aa2.57□□□□□ -2
SCN1A-215ENST00000637285 D2HGDHQ8N465 521 aa2.57□□□□□ -2
SCN1A-215ENST00000637285 PIP4K2CQ8TBX8 421 aa2.57□□□□□ -2
SCN1A-215ENST00000637285 BTN2A2Q8WVV5 523 aa2.57□□□□□ -2
SCN1A-215ENST00000637285 CLEC4DQ8WXI8 215 aa2.57□□□□□ -2
SCN1A-215ENST00000637285 ZNF764Q96H86 408 aaPredicted RBP2.57□□□□□ -2
SCN1A-215ENST00000637285 TMEM176AQ96HP8 235 aa2.57□□□□□ -2
SCN1A-215ENST00000637285 NKX2-4Q9H2Z4 354 aa2.57□□□□□ -2
SCN1A-215ENST00000637285 RIOX1Q9H6W3 641 aa2.57□□□□□ -2
SCN1A-215ENST00000637285 PLA2G3Q9NZ20 509 aa2.57□□□□□ -2
SCN1A-215ENST00000637285 PUF60Q9UHX1 559 aaKnown RBP2.57□□□□□ -2
SCN1A-215ENST00000637285 CUTAO60888 179 aa2.56□□□□□ -2
SCN1A-215ENST00000637285 GCP02774 474 aa2.56□□□□□ -2
SCN1A-215ENST00000637285 LTFP02788 710 aa2.56□□□□□ -2
SCN1A-215ENST00000637285 FAHP16930 419 aa2.56□□□□□ -2
SCN1A-215ENST00000637285 ITGB6P18564 788 aa2.56□□□□□ -2
SCN1A-215ENST00000637285 POLD1P28340 1107 aa2.56□□□□□ -2
SCN1A-215ENST00000637285 GJA4P35212 333 aa2.56□□□□□ -2
SCN1A-215ENST00000637285 KCNJ6P48051 423 aa2.56□□□□□ -2
SCN1A-215ENST00000637285 EIF6P56537 245 aaKnown RBP2.56□□□□□ -2
SCN1A-215ENST00000637285 C21orf58P58505 322 aa2.56□□□□□ -2
SCN1A-215ENST00000637285 TUSC3Q13454 348 aa2.56□□□□□ -2
SCN1A-215ENST00000637285 PRSS53Q2L4Q9 553 aa2.56□□□□□ -2
SCN1A-215ENST00000637285 PAN2Q504Q3 1202 aaKnown RBP2.56□□□□□ -2
SCN1A-215ENST00000637285 VHLLQ6RSH7 139 aa2.56□□□□□ -2
SCN1A-215ENST00000637285 GAREM2Q75VX8 874 aa2.56□□□□□ -2
SCN1A-215ENST00000637285 SND1Q7KZF4 910 aaKnown RBP eCLIP2.56□□□□□ -2
SCN1A-215ENST00000637285 PPIL6Q8IXY8 311 aa2.56□□□□□ -2
SCN1A-215ENST00000637285 THEMISQ8N1K5 641 aaPredicted RBP2.56□□□□□ -2
SCN1A-215ENST00000637285 TTLL11Q8NHH1 800 aa2.56□□□□□ -2
SCN1A-215ENST00000637285 JAM3Q9BX67 310 aa2.56□□□□□ -2
SCN1A-215ENST00000637285 NRDE2Q9H7Z3 1164 aa2.56□□□□□ -2
SCN1A-215ENST00000637285 HECAQ9UBI9 543 aaPredicted RBP2.56□□□□□ -2
SCN1A-215ENST00000637285 ZNF839A8K0R7 811 aa2.55□□□□□ -2
SCN1A-215ENST00000637285 ARHGAP6O43182 974 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms