RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 GJD3Q8N144 294 aa10.78□□□□□ -0.68
CACNA1A-236ENST00000637117 AFG1LQ8WV93 481 aa10.78□□□□□ -0.68
CACNA1A-236ENST00000637117 TGS1Q96RS0 853 aaKnown RBP10.78□□□□□ -0.68
CACNA1A-236ENST00000637117 CTAGE1Q96RT6 745 aa10.78□□□□□ -0.68
CACNA1A-236ENST00000637117 TMEM47Q9BQJ4 181 aa10.78□□□□□ -0.68
CACNA1A-236ENST00000637117 FSD1Q9BTV5 496 aa10.78□□□□□ -0.68
CACNA1A-236ENST00000637117 UBE2ZQ9H832 354 aaPredicted RBP10.78□□□□□ -0.68
CACNA1A-236ENST00000637117 MTUS1Q9ULD2 1270 aa10.78□□□□□ -0.68
CACNA1A-236ENST00000637117 NOVA2Q9UNW9 492 aaKnown RBP10.78□□□□□ -0.68
CACNA1A-236ENST00000637117 ABHD14A-ACY1A0A1B0GW23 586 aa10.77□□□□□ -0.69
CACNA1A-236ENST00000637117 LINC01553A4QN01 128 aa10.77□□□□□ -0.69
CACNA1A-236ENST00000637117 PRR33A8MZF0 331 aa10.77□□□□□ -0.69
CACNA1A-236ENST00000637117 ORC4O43929 436 aa10.77□□□□□ -0.69
CACNA1A-236ENST00000637117 NBNO60934 754 aa10.77□□□□□ -0.69
CACNA1A-236ENST00000637117 GJB5O95377 273 aa10.77□□□□□ -0.69
CACNA1A-236ENST00000637117 CXCL10P02778 98 aa10.77□□□□□ -0.69
CACNA1A-236ENST00000637117 FGRP09769 529 aa10.77□□□□□ -0.69
CACNA1A-236ENST00000637117 CASTP20810 708 aaKnown RBP10.77□□□□□ -0.69
CACNA1A-236ENST00000637117 IKBKEQ14164 716 aa10.77□□□□□ -0.69
CACNA1A-236ENST00000637117 LEXMQ3ZCV2 418 aa10.77□□□□□ -0.69
CACNA1A-236ENST00000637117 TMEM164Q5U3C3 297 aa10.77□□□□□ -0.69
CACNA1A-236ENST00000637117 CCDC62Q6P9F0 684 aa10.77□□□□□ -0.69
CACNA1A-236ENST00000637117 PHTF2Q8N3S3 785 aa10.77□□□□□ -0.69
CACNA1A-236ENST00000637117 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.77□□□□□ -0.69
CACNA1A-236ENST00000637117 DHX38Q92620 1227 aaKnown RBP10.77□□□□□ -0.69
CACNA1A-236ENST00000637117 ANAPC4Q9UJX5 808 aa10.77□□□□□ -0.69
CACNA1A-236ENST00000637117 MUC6Q6W4X9 2439 aa10.77□□□□□ -0.69
CACNA1A-236ENST00000637117 TTC41PQ6P2S7 1318 aa10.77□□□□□ -0.69
CACNA1A-236ENST00000637117 FOXP2O15409 715 aa10.76□□□□□ -0.69
CACNA1A-236ENST00000637117 S1PR4O95977 384 aa10.76□□□□□ -0.69
CACNA1A-236ENST00000637117 GH1P01241 217 aa10.76□□□□□ -0.69
CACNA1A-236ENST00000637117 MMP3P08254 477 aa10.76□□□□□ -0.69
CACNA1A-236ENST00000637117 PDHBP11177 359 aa10.76□□□□□ -0.69
CACNA1A-236ENST00000637117 CKBP12277 381 aa10.76□□□□□ -0.69
CACNA1A-236ENST00000637117 KCNA5P22460 613 aa10.76□□□□□ -0.69
CACNA1A-236ENST00000637117 LY6KQ17RY6 165 aa10.76□□□□□ -0.69
CACNA1A-236ENST00000637117 TCTN1Q2MV58 587 aa10.76□□□□□ -0.69
CACNA1A-236ENST00000637117 LINC01559Q495D7 138 aa10.76□□□□□ -0.69
CACNA1A-236ENST00000637117 C20orf194Q5TEA3 1177 aa10.76□□□□□ -0.69
CACNA1A-236ENST00000637117 FAM117BQ6P1L5 589 aa10.76□□□□□ -0.69
CACNA1A-236ENST00000637117 SEPT14Q6ZU15 432 aa10.76□□□□□ -0.69
CACNA1A-236ENST00000637117 RGS22Q8NE09 1264 aa10.76□□□□□ -0.69
CACNA1A-236ENST00000637117 PI4K2BQ8TCG2 481 aa10.76□□□□□ -0.69
CACNA1A-236ENST00000637117 KAT2BQ92831 832 aa10.76□□□□□ -0.69
CACNA1A-236ENST00000637117 CRBNQ96SW2 442 aa10.76□□□□□ -0.69
CACNA1A-236ENST00000637117 TOMM22Q9NS69 142 aa10.76□□□□□ -0.69
CACNA1A-236ENST00000637117 TCP11L1Q9NUJ3 509 aa10.76□□□□□ -0.69
CACNA1A-236ENST00000637117 HDAC6Q9UBN7 1215 aa10.76□□□□□ -0.69
CACNA1A-236ENST00000637117 FCF1Q9Y324 198 aaKnown RBP10.76□□□□□ -0.69
CACNA1A-236ENST00000637117 EFCAB14O75071 495 aa10.75□□□□□ -0.69
CACNA1A-236ENST00000637117 ALADP13716 330 aa10.75□□□□□ -0.69
CACNA1A-236ENST00000637117 IL9P15248 144 aa10.75□□□□□ -0.69
CACNA1A-236ENST00000637117 RBL2Q08999 1139 aa10.75□□□□□ -0.69
CACNA1A-236ENST00000637117 DGKDQ16760 1214 aa10.75□□□□□ -0.69
CACNA1A-236ENST00000637117 CRTC2Q53ET0 693 aaPredicted RBP10.75□□□□□ -0.69
CACNA1A-236ENST00000637117 RRP12Q5JTH9 1297 aaKnown RBP10.75□□□□□ -0.69
CACNA1A-236ENST00000637117 VPS53Q5VIR6 699 aa10.75□□□□□ -0.69
CACNA1A-236ENST00000637117 CHST3Q7LGC8 479 aa10.75□□□□□ -0.69
CACNA1A-236ENST00000637117 C7orf31Q8N865 590 aa10.75□□□□□ -0.69
CACNA1A-236ENST00000637117 TBC1D5Q92609 795 aa10.75□□□□□ -0.69
CACNA1A-236ENST00000637117 UIMC1Q96RL1 719 aa10.75□□□□□ -0.69
CACNA1A-236ENST00000637117 ALG1Q9BT22 464 aa10.75□□□□□ -0.69
CACNA1A-236ENST00000637117 GTF2IRD1Q9UHL9 959 aa10.75□□□□□ -0.69
CACNA1A-236ENST00000637117 RCAN3Q9UKA8 241 aa10.75□□□□□ -0.69
CACNA1A-236ENST00000637117 INSL6Q9Y581 213 aa10.75□□□□□ -0.69
CACNA1A-236ENST00000637117 PTPRSQ13332 1948 aa10.75□□□□□ -0.69
CACNA1A-236ENST00000637117 WDR19Q8NEZ3 1342 aa10.75□□□□□ -0.69
CACNA1A-236ENST00000637117 PIEZO1Q92508 2521 aa10.75□□□□□ -0.69
CACNA1A-236ENST00000637117 TANC1Q9C0D5 1861 aa10.74□□□□□ -0.69
CACNA1A-236ENST00000637117 ARHGAP1Q07960 439 aa10.74□□□□□ -0.69
CACNA1A-236ENST00000637117 ZNF543Q08ER8 600 aa10.74□□□□□ -0.69
CACNA1A-236ENST00000637117 PTK7Q13308 1070 aa10.74□□□□□ -0.69
CACNA1A-236ENST00000637117 AGERQ15109 404 aa10.74□□□□□ -0.69
CACNA1A-236ENST00000637117 ALX1Q15699 326 aa10.74□□□□□ -0.69
CACNA1A-236ENST00000637117 EML3Q32P44 896 aa10.74□□□□□ -0.69
CACNA1A-236ENST00000637117 MAP7D1Q3KQU3 841 aa10.74□□□□□ -0.69
CACNA1A-236ENST00000637117 USH1GQ495M9 461 aa10.74□□□□□ -0.69
CACNA1A-236ENST00000637117 B4GALNT3Q6L9W6 998 aa10.74□□□□□ -0.69
CACNA1A-236ENST00000637117 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.74□□□□□ -0.69
CACNA1A-236ENST00000637117 BAP1Q92560 729 aa10.74□□□□□ -0.69
CACNA1A-236ENST00000637117 TTC14Q96N46 770 aa10.74□□□□□ -0.69
CACNA1A-236ENST00000637117 TAAR1Q96RJ0 339 aa10.74□□□□□ -0.69
CACNA1A-236ENST00000637117 CTNNA3Q9UI47 895 aa10.74□□□□□ -0.69
CACNA1A-236ENST00000637117 RBAK-RBAKDNI3L0D1 243 aa10.73□□□□□ -0.69
CACNA1A-236ENST00000637117 LZTS3O60299 673 aaPredicted RBP10.73□□□□□ -0.69
CACNA1A-236ENST00000637117 LGR5O75473 907 aa10.73□□□□□ -0.69
CACNA1A-236ENST00000637117 FGAP02671 866 aa10.73□□□□□ -0.69
CACNA1A-236ENST00000637117 SNHG28P0DPA3 235 aa10.73□□□□□ -0.69
CACNA1A-236ENST00000637117 ZNF200P98182 395 aaPredicted RBP10.73□□□□□ -0.69
CACNA1A-236ENST00000637117 STXBP2Q15833 593 aa10.73□□□□□ -0.69
CACNA1A-236ENST00000637117 TRIM71Q2Q1W2 868 aaKnown RBP10.73□□□□□ -0.69
CACNA1A-236ENST00000637117 ZNF618Q5T7W0 954 aa10.73□□□□□ -0.69
CACNA1A-236ENST00000637117 TRAF7Q6Q0C0 670 aa10.73□□□□□ -0.69
CACNA1A-236ENST00000637117 BPHLQ86WA6 291 aaPredicted RBP10.73□□□□□ -0.69
CACNA1A-236ENST00000637117 ZNF511Q8NB15 262 aa10.73□□□□□ -0.69
CACNA1A-236ENST00000637117 SYTL5Q8TDW5 730 aaPredicted RBP10.73□□□□□ -0.69
CACNA1A-236ENST00000637117 OTUD7AQ8TE49 926 aaPredicted RBP10.73□□□□□ -0.69
CACNA1A-236ENST00000637117 NSUN6Q8TEA1 469 aaKnown RBP10.73□□□□□ -0.69
CACNA1A-236ENST00000637117 FOXJ1Q92949 421 aa10.73□□□□□ -0.69
CACNA1A-236ENST00000637117 IWS1Q96ST2 819 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms