RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 RRP1BQ14684 758 aaKnown RBP13.39□□□□□ -0.27
CLN8-212ENST00000637083 SLC9C1Q4G0N8 1177 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 TRIM59Q8IWR1 403 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 SCFD1Q8WVM8 642 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 LENG9Q96B70 501 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 ALS2CR12Q96Q35 445 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 KCTD10Q9H3F6 313 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 ZHX3Q9H4I2 956 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 TUFT1Q9NNX1 390 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 ZNF70Q9UC06 446 aaPredicted RBP13.39□□□□□ -0.27
CLN8-212ENST00000637083 TRAF3IP3Q9Y228 551 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 PCDHA13Q9Y5I0 950 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 A0A1W2PRG0 241 aa13.38□□□□□ -0.27
CLN8-212ENST00000637083 POTEFA5A3E0 1075 aa13.38□□□□□ -0.27
CLN8-212ENST00000637083 LRRC53A6NM62 1247 aa13.38□□□□□ -0.27
CLN8-212ENST00000637083 FAM86B1E9PN63 330 aa13.38□□□□□ -0.27
CLN8-212ENST00000637083 PDXKO00764 312 aa13.38□□□□□ -0.27
CLN8-212ENST00000637083 MSH4O15457 936 aa13.38□□□□□ -0.27
CLN8-212ENST00000637083 EYA4O95677 639 aa13.38□□□□□ -0.27
CLN8-212ENST00000637083 FAM86B2P0C5J1 330 aa13.38□□□□□ -0.27
CLN8-212ENST00000637083 POTEIP0CG38 1075 aa13.38□□□□□ -0.27
CLN8-212ENST00000637083 RPL13P26373 211 aaKnown RBP13.38□□□□□ -0.27
CLN8-212ENST00000637083 GIT2Q14161 759 aa13.38□□□□□ -0.27
CLN8-212ENST00000637083 POTEGQ6S5H5 508 aa13.38□□□□□ -0.27
CLN8-212ENST00000637083 POTEEQ6S8J3 1075 aa13.38□□□□□ -0.27
CLN8-212ENST00000637083 FRMD5Q7Z6J6 570 aa13.38□□□□□ -0.27
CLN8-212ENST00000637083 NELFCDQ8IXH7 590 aa13.38□□□□□ -0.27
CLN8-212ENST00000637083 TBC1D7Q9P0N9 293 aa13.38□□□□□ -0.27
CLN8-212ENST00000637083 ARHGAP20Q9P2F6 1191 aa13.38□□□□□ -0.27
CLN8-212ENST00000637083 JRKLQ9Y4A0 524 aa13.38□□□□□ -0.27
CLN8-212ENST00000637083 TNS1Q9HBL0 1735 aaKnown RBP13.38□□□□□ -0.27
CLN8-212ENST00000637083 TBCAO75347 108 aaKnown RBP13.37□□□□□ -0.27
CLN8-212ENST00000637083 SPATA31C1P0DKV0 1188 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 SNAP25P60880 206 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 KNOP1Q1ED39 458 aaKnown RBP13.37□□□□□ -0.27
CLN8-212ENST00000637083 SPDYE2Q495Y8 402 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 ARSHQ5FYA8 562 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 SFMBT2Q5VUG0 894 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 CCDC70Q6NSX1 233 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 LARGE2Q8N3Y3 721 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 MSL3Q8N5Y2 521 aaKnown RBP13.37□□□□□ -0.27
CLN8-212ENST00000637083 MTMR14Q8NCE2 650 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 BAP1Q92560 729 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 RANBP17Q9H2T7 1088 aaKnown RBP13.37□□□□□ -0.27
CLN8-212ENST00000637083 METTL14Q9HCE5 456 aaKnown RBP13.37□□□□□ -0.27
CLN8-212ENST00000637083 PRDM10Q9NQV6 1147 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 TRIM10Q9UDY6 481 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 ZBTB21Q9ULJ3 1066 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 PSME4Q14997 1843 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 PJA2O43164 708 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 RAD17O75943 681 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 SERPING1P05155 500 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 PRLRP16471 622 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 EIF4A3P38919 411 aaKnown RBP13.37□□□□□ -0.27
CLN8-212ENST00000637083 MAGEA1P43355 309 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 KCNMA1Q12791 1236 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 PABPC4Q13310 644 aaKnown RBP eCLIP13.37□□□□□ -0.27
CLN8-212ENST00000637083 LONRF2Q1L5Z9 754 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 FAM83AQ86UY5 434 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 GLIS3Q8NEA6 775 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 AGBL3Q8NEM8 1001 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 EIF2AK1Q9BQI3 630 aaKnown RBP13.37□□□□□ -0.27
CLN8-212ENST00000637083 EPC1Q9H2F5 836 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 VCPKMTQ9H867 229 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 ANKZF1Q9H8Y5 726 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 FEM1BQ9UK73 627 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 VAV3Q9UKW4 847 aa13.37□□□□□ -0.27
CLN8-212ENST00000637083 NPHP3-ACAD11A0A0J9YXS1 232 aa13.36□□□□□ -0.27
CLN8-212ENST00000637083 EIF3JO75822 258 aaKnown RBP13.36□□□□□ -0.27
CLN8-212ENST00000637083 SEC31AO94979 1220 aaKnown RBP13.36□□□□□ -0.27
CLN8-212ENST00000637083 TBC1D8O95759 1140 aa13.36□□□□□ -0.27
CLN8-212ENST00000637083 CFBP00751 764 aa13.36□□□□□ -0.27
CLN8-212ENST00000637083 ATP1A1P05023 1023 aaKnown RBP13.36□□□□□ -0.27
CLN8-212ENST00000637083 KCNA3P22001 575 aa13.36□□□□□ -0.27
CLN8-212ENST00000637083 NR2F2P24468 414 aa13.36□□□□□ -0.27
CLN8-212ENST00000637083 HOXA13P31271 388 aaPredicted RBP13.36□□□□□ -0.27
CLN8-212ENST00000637083 SETQ01105 290 aaPredicted RBP13.36□□□□□ -0.27
CLN8-212ENST00000637083 CYP27A1Q02318 531 aa13.36□□□□□ -0.27
CLN8-212ENST00000637083 BMT2Q1RMZ1 405 aa13.36□□□□□ -0.27
CLN8-212ENST00000637083 FAM83BQ5T0W9 1011 aa13.36□□□□□ -0.27
CLN8-212ENST00000637083 HDXQ7Z353 690 aa13.36□□□□□ -0.27
CLN8-212ENST00000637083 SPICE1Q8N0Z3 855 aa13.36□□□□□ -0.27
CLN8-212ENST00000637083 RNF10Q8N5U6 811 aaKnown RBP13.36□□□□□ -0.27
CLN8-212ENST00000637083 GMLQ99445 158 aa13.36□□□□□ -0.27
CLN8-212ENST00000637083 P2RX7Q99572 595 aaKnown RBP13.36□□□□□ -0.27
CLN8-212ENST00000637083 REEP2Q9BRK0 252 aa13.36□□□□□ -0.27
CLN8-212ENST00000637083 WDR11Q9BZH6 1224 aa13.36□□□□□ -0.27
CLN8-212ENST00000637083 LACRTQ9GZZ8 138 aa13.36□□□□□ -0.27
CLN8-212ENST00000637083 OPLAHO14841 1288 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 SLC16A3O15427 465 aaKnown RBP13.35□□□□□ -0.27
CLN8-212ENST00000637083 PLA2G4AP47712 749 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 CACNB1Q02641 598 aaPredicted RBP13.35□□□□□ -0.27
CLN8-212ENST00000637083 PPP2R5CQ13362 524 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 MAP9Q49MG5 647 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 TDRD12Q587J7 1177 aaKnown RBP13.35□□□□□ -0.27
CLN8-212ENST00000637083 WDR93Q6P2C0 686 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 STXBP4Q6ZWJ1 553 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 EPM2AIP1Q7L775 607 aaPredicted RBP13.35□□□□□ -0.27
CLN8-212ENST00000637083 KRT26Q7Z3Y9 468 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 CCDC155Q8N6L0 562 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms