RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 ACTRT1Q8TDG2 376 aa17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 TBC1D5Q92609 795 aa17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 RIC8AQ9NPQ8 531 aa17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 DOT1LQ8TEK3 1739 aa17.05■□□□□ 0.32
CACNA1A-235ENST00000637004 TOGARAM1Q9Y4F4 1720 aa17.05■□□□□ 0.32
CACNA1A-235ENST00000637004 LOC102724428A0A0B4J2F2 783 aa17.05■□□□□ 0.32
CACNA1A-235ENST00000637004 ERVV-1B6SEH8 477 aa17.05■□□□□ 0.32
CACNA1A-235ENST00000637004 SIK1P57059 783 aa17.05■□□□□ 0.32
CACNA1A-235ENST00000637004 SLC8A3P57103 927 aa17.05■□□□□ 0.32
CACNA1A-235ENST00000637004 IFI16Q16666 785 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-235ENST00000637004 LRRC55Q6ZSA7 311 aa17.05■□□□□ 0.32
CACNA1A-235ENST00000637004 ANKS4BQ8N8V4 417 aa17.05■□□□□ 0.32
CACNA1A-235ENST00000637004 TBC1D22AQ8WUA7 517 aa17.05■□□□□ 0.32
CACNA1A-235ENST00000637004 RSRC1Q96IZ7 334 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-235ENST00000637004 CCNL1Q9UK58 526 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-235ENST00000637004 FBXL5Q9UKA1 691 aa17.05■□□□□ 0.32
CACNA1A-235ENST00000637004 RREB1Q92766 1687 aa17.05■□□□□ 0.32
CACNA1A-235ENST00000637004 BTNL10A8MVZ5 291 aa17.05■□□□□ 0.32
CACNA1A-235ENST00000637004 TLR2O60603 784 aa17.05■□□□□ 0.32
CACNA1A-235ENST00000637004 MAGOHP61326 146 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-235ENST00000637004 KCNMA1Q12791 1236 aa17.05■□□□□ 0.32
CACNA1A-235ENST00000637004 BYSLQ13895 437 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-235ENST00000637004 MAGOHBQ96A72 148 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-235ENST00000637004 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.05■□□□□ 0.32
CACNA1A-235ENST00000637004 TRIM6Q9C030 488 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-235ENST00000637004 CNOT8Q9UFF9 292 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-235ENST00000637004 CCDC188H7C350 402 aa17.04■□□□□ 0.32
CACNA1A-235ENST00000637004 PPP1R12AO14974 1030 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-235ENST00000637004 CALRP27797 417 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-235ENST00000637004 ITPK1Q13572 414 aa17.04■□□□□ 0.32
CACNA1A-235ENST00000637004 CENPTQ96BT3 561 aa17.04■□□□□ 0.32
CACNA1A-235ENST00000637004 HOOK2Q96ED9 719 aa17.04■□□□□ 0.32
CACNA1A-235ENST00000637004 CHMP6Q96FZ7 201 aa17.04■□□□□ 0.32
CACNA1A-235ENST00000637004 STK17AQ9UEE5 414 aa17.04■□□□□ 0.32
CACNA1A-235ENST00000637004 BHMG1C9JSJ3 638 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-235ENST00000637004 SART1O43290 800 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-235ENST00000637004 ATP2C2O75185 946 aa17.04■□□□□ 0.32
CACNA1A-235ENST00000637004 KIF4AO95239 1232 aa17.04■□□□□ 0.32
CACNA1A-235ENST00000637004 DRD4P21917 467 aa17.04■□□□□ 0.32
CACNA1A-235ENST00000637004 USP11P51784 963 aa17.04■□□□□ 0.32
CACNA1A-235ENST00000637004 KRT71Q3SY84 523 aa17.04■□□□□ 0.32
CACNA1A-235ENST00000637004 C10orf76Q5T2E6 689 aa17.04■□□□□ 0.32
CACNA1A-235ENST00000637004 KRT25Q7Z3Z0 450 aa17.04■□□□□ 0.32
CACNA1A-235ENST00000637004 HEATR3Q7Z4Q2 680 aa17.04■□□□□ 0.32
CACNA1A-235ENST00000637004 CCDC197Q8NCU1 140 aa17.04■□□□□ 0.32
CACNA1A-235ENST00000637004 FAXDC2Q96IV6 333 aa17.04■□□□□ 0.32
CACNA1A-235ENST00000637004 PSMD1Q99460 953 aa17.04■□□□□ 0.32
CACNA1A-235ENST00000637004 PGRMC1O00264 195 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 IRF6O14896 467 aa17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 CEP104O60308 925 aa17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 ATP6V1G2O95670 118 aa17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 EIF3BP55884 814 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 ELF3P78545 371 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 ZNF34Q8IZ26 560 aa17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 BARHL2Q9NY43 387 aa17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 A0A087X0T9 212 aa17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 CCT8L1PA6NM43 557 aa17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 PHF20L1A8MW92 1017 aa17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 PPIP5K2O43314 1243 aa17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 CCNT1O60563 726 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 NEBLO76041 1014 aa17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 GSTA1P08263 222 aa17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 FAM228BP0C875 321 aa17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 TECP42680 631 aa17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 POLR2FP61218 127 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 KLHL30Q0D2K2 578 aa17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 LETM2Q2VYF4 491 aa17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 NBPF20Q3BBV1 942 aa17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 CCDC152Q4G0S7 254 aa17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 LRCH2Q5VUJ6 765 aa17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 RCSD1Q6JBY9 416 aa17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 CRELD2Q6UXH1 353 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 CUL5Q93034 780 aa17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 NOD2Q9HC29 1040 aa17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 COL4A3BPQ9Y5P4 624 aa17.03■□□□□ 0.32
CACNA1A-235ENST00000637004 ZNF804BA4D1E1 1349 aa17.02■□□□□ 0.32
CACNA1A-235ENST00000637004 PSMD2Q13200 908 aa17.02■□□□□ 0.32
CACNA1A-235ENST00000637004 DGKHQ86XP1 1220 aa17.02■□□□□ 0.32
CACNA1A-235ENST00000637004 DDX42Q86XP3 938 aaKnown RBP eCLIP17.02■□□□□ 0.32
CACNA1A-235ENST00000637004 CCDC26Q8TAB7 109 aa17.02■□□□□ 0.32
CACNA1A-235ENST00000637004 LSM14BQ9BX40 385 aaKnown RBP17.02■□□□□ 0.32
CACNA1A-235ENST00000637004 ADAMTS1Q9UHI8 967 aa17.02■□□□□ 0.32
CACNA1A-235ENST00000637004 MYMKA6NI61 221 aa17.02■□□□□ 0.32
CACNA1A-235ENST00000637004 NOL4O94818 638 aa17.02■□□□□ 0.32
CACNA1A-235ENST00000637004 BAG6P46379 1132 aa17.02■□□□□ 0.32
CACNA1A-235ENST00000637004 FKBP3Q00688 224 aaKnown RBP17.02■□□□□ 0.32
CACNA1A-235ENST00000637004 CHRNDQ07001 517 aa17.02■□□□□ 0.32
CACNA1A-235ENST00000637004 NAA25Q14CX7 972 aa17.02■□□□□ 0.32
CACNA1A-235ENST00000637004 NONOQ15233 471 aaKnown RBP eCLIP17.02■□□□□ 0.32
CACNA1A-235ENST00000637004 PPP1R7Q15435 360 aa17.02■□□□□ 0.32
CACNA1A-235ENST00000637004 HIBCHQ6NVY1 386 aaPredicted RBP17.02■□□□□ 0.32
CACNA1A-235ENST00000637004 TMC3Q7Z5M5 1100 aa17.02■□□□□ 0.32
CACNA1A-235ENST00000637004 AMIGO3Q86WK7 504 aa17.02■□□□□ 0.32
CACNA1A-235ENST00000637004 PNMA1Q8ND90 353 aa17.02■□□□□ 0.32
CACNA1A-235ENST00000637004 XPO6Q96QU8 1125 aaKnown RBP17.02■□□□□ 0.32
CACNA1A-235ENST00000637004 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.02■□□□□ 0.32
CACNA1A-235ENST00000637004 MMTAG2Q9BU76 263 aaKnown RBP17.02■□□□□ 0.32
CACNA1A-235ENST00000637004 LRRC27Q9C0I9 530 aa17.02■□□□□ 0.32
CACNA1A-235ENST00000637004 SLITRK6Q9H5Y7 841 aa17.02■□□□□ 0.32
CACNA1A-235ENST00000637004 AIPL1Q9NZN9 384 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms