RNA–Protein interactions for RNA: ENST00000636759.1

SCN1A-213, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 3,606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-213ENST00000636759 SYNRGQ9UMZ2 1314 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 ASAP2O43150 1006 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 WFS1O76024 890 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 COPS2P61201 443 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 SPAG1Q07617 926 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 AIMP1Q12904 312 aaKnown RBP7.45□□□□□ -1.22
SCN1A-213ENST00000636759 AGBL2Q5U5Z8 902 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 OLFML2BQ68BL8 750 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 GET4Q7L5D6 327 aaPredicted RBP7.45□□□□□ -1.22
SCN1A-213ENST00000636759 SAPCD2Q86UD0 394 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 UBLCP1Q8WVY7 318 aaPredicted RBP7.45□□□□□ -1.22
SCN1A-213ENST00000636759 ABHD8Q96I13 439 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 CENPKQ9BS16 269 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 CTNNAL1Q9UBT7 734 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 KIAA1551Q9HCM1 1747 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 MAGEA13PA6NCF6 341 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 MMEP08473 750 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 FECHP22830 423 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 CMPK2Q5EBM0 449 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 ZC3H18Q86VM9 953 aaKnown RBP7.45□□□□□ -1.22
SCN1A-213ENST00000636759 CREG2Q8IUH2 290 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 IQCF2Q8IXL9 164 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 PTPRN2Q92932 1015 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 SLC35B4Q969S0 331 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 CATSPER2Q96P56 530 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 NUDCD1Q96RS6 583 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 MYD88Q99836 296 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 PLCB1Q9NQ66 1216 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 SUCLA2Q9P2R7 463 aaPredicted RBP7.45□□□□□ -1.22
SCN1A-213ENST00000636759 AGAP1Q9UPQ3 857 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 R3HDM2Q9Y2K5 976 aaKnown RBP7.45□□□□□ -1.22
SCN1A-213ENST00000636759 ZNF711Q9Y462 761 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 COMMD3-BMI1R4GMX3 469 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 AFF2P51816 1311 aa7.45□□□□□ -1.22
SCN1A-213ENST00000636759 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.44□□□□□ -1.22
SCN1A-213ENST00000636759 F8W031 263 aaPredicted RBP7.44□□□□□ -1.22
SCN1A-213ENST00000636759 NVLO15381 856 aaKnown RBP7.44□□□□□ -1.22
SCN1A-213ENST00000636759 P4HA2O15460 535 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 SUN1O94901 812 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 BCRP11274 1271 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 OXCT1P55809 520 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 MTMR3Q13615 1198 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 CFAP221Q4G0U5 840 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 OR52E8Q6IFG1 317 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 ZNF280DQ6N043 979 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 MYOCDQ8IZQ8 938 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 PPFIBP2Q8ND30 876 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 DBNDD2Q9BQY9 259 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 FAM129AQ9BZQ8 928 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 ABCF3Q9NUQ8 709 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 TMED5Q9Y3A6 229 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 CD2APQ9Y5K6 639 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 TRIM43BA6NCK2 446 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 CDC25AP30304 524 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 CFAP157Q5JU67 520 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 TTC39AQ5SRH9 613 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 KLC3Q6P597 504 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 DHX32Q7L7V1 743 aaKnown RBP7.44□□□□□ -1.22
SCN1A-213ENST00000636759 FOXP4Q8IVH2 680 aaPredicted RBP7.44□□□□□ -1.22
SCN1A-213ENST00000636759 STK32AQ8WU08 396 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 SIKE1Q9BRV8 207 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 VPS16Q9H269 839 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 KCNMB3Q9NPA1 279 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 STOML1Q9UBI4 398 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 TFR2Q9UP52 801 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 ZNF148Q9UQR1 794 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 THRAP3Q9Y2W1 955 aaKnown RBP7.44□□□□□ -1.22
SCN1A-213ENST00000636759 BCL9O00512 1426 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 FAM237AA0A1B0GTK4 181 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 H0Y3Z8 333 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 ZFYP08048 801 aaPredicted RBP7.44□□□□□ -1.22
SCN1A-213ENST00000636759 HARSP12081 509 aaKnown RBP7.44□□□□□ -1.22
SCN1A-213ENST00000636759 BMP6P22004 513 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 FUT4P22083 530 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 BTG3Q14201 252 aaPredicted RBP7.44□□□□□ -1.22
SCN1A-213ENST00000636759 KANK3Q6NY19 840 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 RBBP8NLQ8NC74 664 aaPredicted RBP7.44□□□□□ -1.22
SCN1A-213ENST00000636759 OR2W6PQ8NHA6 318 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 ERMNQ8TAM6 284 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 DSCC1Q9BVC3 393 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 TIPINQ9BVW5 301 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 GPR108Q9NPR9 543 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 CEP126Q9P2H0 1117 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 GGT7Q9UJ14 662 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 HPSEQ9Y251 543 aa7.44□□□□□ -1.22
SCN1A-213ENST00000636759 LAMB1P07942 1786 aa7.43□□□□□ -1.22
SCN1A-213ENST00000636759 COL5A3P25940 1745 aaPredicted RBP7.43□□□□□ -1.22
SCN1A-213ENST00000636759 MAST3O60307 1309 aa7.43□□□□□ -1.22
SCN1A-213ENST00000636759 SCN7AQ01118 1682 aa7.43□□□□□ -1.22
SCN1A-213ENST00000636759 A0A0G2JS52 829 aa7.43□□□□□ -1.22
SCN1A-213ENST00000636759 SEMA3EO15041 775 aa7.43□□□□□ -1.22
SCN1A-213ENST00000636759 PPP6R2O75170 966 aa7.43□□□□□ -1.22
SCN1A-213ENST00000636759 RARAP10276 462 aa7.43□□□□□ -1.22
SCN1A-213ENST00000636759 CXCR5P32302 372 aa7.43□□□□□ -1.22
SCN1A-213ENST00000636759 PBX1P40424 430 aa7.43□□□□□ -1.22
SCN1A-213ENST00000636759 SPTY2D1Q68D10 685 aaPredicted RBP7.43□□□□□ -1.22
SCN1A-213ENST00000636759 SHC4Q6S5L8 630 aa7.43□□□□□ -1.22
SCN1A-213ENST00000636759 CCNJLQ8IV13 435 aa7.43□□□□□ -1.22
SCN1A-213ENST00000636759 KBTBD3Q8NAB2 608 aa7.43□□□□□ -1.22
SCN1A-213ENST00000636759 LENG1Q96BZ8 264 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms