RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 GNPTABQ3T906 1256 aa9.63□□□□□ -0.87
CDKL5-209ENST00000635828 TRAPPC12Q8WVT3 735 aa9.63□□□□□ -0.87
CDKL5-209ENST00000635828 PAWRQ96IZ0 340 aaKnown RBP9.63□□□□□ -0.87
CDKL5-209ENST00000635828 EPSTI1Q96J88 318 aa9.63□□□□□ -0.87
CDKL5-209ENST00000635828 PANK2Q9BZ23 570 aa9.63□□□□□ -0.87
CDKL5-209ENST00000635828 SAMM50Q9Y512 469 aa9.63□□□□□ -0.87
CDKL5-209ENST00000635828 GAS7O60861 476 aa9.63□□□□□ -0.87
CDKL5-209ENST00000635828 CTTNQ14247 550 aaKnown RBP9.63□□□□□ -0.87
CDKL5-209ENST00000635828 ZRSR1Q15695 479 aaKnown RBP9.63□□□□□ -0.87
CDKL5-209ENST00000635828 NLRX1Q86UT6 975 aa9.63□□□□□ -0.87
CDKL5-209ENST00000635828 C16orf70Q9BSU1 422 aa9.63□□□□□ -0.87
CDKL5-209ENST00000635828 SLC9A2Q9UBY0 812 aa9.63□□□□□ -0.87
CDKL5-209ENST00000635828 ZNF862O60290 1169 aa9.63□□□□□ -0.87
CDKL5-209ENST00000635828 MYL3P08590 195 aa9.63□□□□□ -0.87
CDKL5-209ENST00000635828 GJA8P48165 433 aa9.63□□□□□ -0.87
CDKL5-209ENST00000635828 RILPL1Q5EBL4 403 aa9.63□□□□□ -0.87
CDKL5-209ENST00000635828 SWSAP1Q6NVH7 229 aa9.63□□□□□ -0.87
CDKL5-209ENST00000635828 B3GNT9Q6UX72 402 aa9.63□□□□□ -0.87
CDKL5-209ENST00000635828 CHD9Q3L8U1 2897 aa9.63□□□□□ -0.87
CDKL5-209ENST00000635828 A0A087X0B3 334 aa9.62□□□□□ -0.87
CDKL5-209ENST00000635828 GJB1P08034 283 aa9.62□□□□□ -0.87
CDKL5-209ENST00000635828 GJA9P57773 515 aa9.62□□□□□ -0.87
CDKL5-209ENST00000635828 METTL7BQ6UX53 244 aa9.62□□□□□ -0.87
CDKL5-209ENST00000635828 BRAPQ7Z569 592 aa9.62□□□□□ -0.87
CDKL5-209ENST00000635828 LINC00301Q8NCQ3 95 aa9.62□□□□□ -0.87
CDKL5-209ENST00000635828 KLHDC9Q8NEP7 349 aa9.62□□□□□ -0.87
CDKL5-209ENST00000635828 SENP6Q9GZR1 1112 aaPredicted RBP9.62□□□□□ -0.87
CDKL5-209ENST00000635828 EHMT1Q9H9B1 1298 aa9.62□□□□□ -0.87
CDKL5-209ENST00000635828 PCDHA12Q9UN75 941 aa9.62□□□□□ -0.87
CDKL5-209ENST00000635828 MYH9P35579 1960 aaKnown RBP9.62□□□□□ -0.87
CDKL5-209ENST00000635828 ALPK3Q96L96 1907 aa9.62□□□□□ -0.87
CDKL5-209ENST00000635828 GH1P01241 217 aa9.62□□□□□ -0.87
CDKL5-209ENST00000635828 OR52Z1P0C646 297 aa9.62□□□□□ -0.87
CDKL5-209ENST00000635828 ATP2C1P98194 919 aaPredicted RBP9.62□□□□□ -0.87
CDKL5-209ENST00000635828 PURAQ00577 322 aaKnown RBP9.62□□□□□ -0.87
CDKL5-209ENST00000635828 MMTAG2Q9BU76 263 aaKnown RBP9.62□□□□□ -0.87
CDKL5-209ENST00000635828 CRISPLD2Q9H0B8 497 aa9.62□□□□□ -0.87
CDKL5-209ENST00000635828 CSRNP2Q9H175 543 aa9.62□□□□□ -0.87
CDKL5-209ENST00000635828 OGDHLQ9ULD0 1010 aa9.62□□□□□ -0.87
CDKL5-209ENST00000635828 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.62□□□□□ -0.87
CDKL5-209ENST00000635828 A6NJR5 290 aa9.62□□□□□ -0.87
CDKL5-209ENST00000635828 MED24O75448 989 aa9.62□□□□□ -0.87
CDKL5-209ENST00000635828 KCNK18Q7Z418 384 aa9.62□□□□□ -0.87
CDKL5-209ENST00000635828 TRMT44Q8IYL2 757 aaKnown RBP9.62□□□□□ -0.87
CDKL5-209ENST00000635828 MARCH6O60337 910 aa9.61□□□□□ -0.87
CDKL5-209ENST00000635828 TGFB3P10600 412 aa9.61□□□□□ -0.87
CDKL5-209ENST00000635828 ABHD15Q6UXT9 468 aa9.61□□□□□ -0.87
CDKL5-209ENST00000635828 DYDC2Q96IM9 177 aa9.61□□□□□ -0.87
CDKL5-209ENST00000635828 SENP7Q9BQF6 1050 aa9.61□□□□□ -0.87
CDKL5-209ENST00000635828 ZSCAN16Q9H4T2 348 aaPredicted RBP9.61□□□□□ -0.87
CDKL5-209ENST00000635828 GABBR1Q9UBS5 961 aa9.61□□□□□ -0.87
CDKL5-209ENST00000635828 FBXO2Q9UK22 296 aaPredicted RBP9.61□□□□□ -0.87
CDKL5-209ENST00000635828 A0A1W2PQ45 241 aaPredicted RBP9.61□□□□□ -0.87
CDKL5-209ENST00000635828 A0A1W2PQY0 241 aa9.61□□□□□ -0.87
CDKL5-209ENST00000635828 NOP56O00567 594 aaKnown RBP9.61□□□□□ -0.87
CDKL5-209ENST00000635828 GADD45BO75293 160 aaPredicted RBP9.61□□□□□ -0.87
CDKL5-209ENST00000635828 STAM2O75886 525 aa9.61□□□□□ -0.87
CDKL5-209ENST00000635828 LGALS2P05162 132 aa9.61□□□□□ -0.87
CDKL5-209ENST00000635828 ACLYP53396 1101 aa9.61□□□□□ -0.87
CDKL5-209ENST00000635828 SETQ01105 290 aaPredicted RBP9.61□□□□□ -0.87
CDKL5-209ENST00000635828 PLA2G4FQ68DD2 849 aa9.61□□□□□ -0.87
CDKL5-209ENST00000635828 XRRA1Q6P2D8 792 aa9.61□□□□□ -0.87
CDKL5-209ENST00000635828 FAM177A1Q8N128 213 aaPredicted RBP9.61□□□□□ -0.87
CDKL5-209ENST00000635828 PPTC7Q8NI37 304 aa9.61□□□□□ -0.87
CDKL5-209ENST00000635828 PIGOQ8TEQ8 1089 aa9.61□□□□□ -0.87
CDKL5-209ENST00000635828 MPHOSPH6Q99547 160 aaKnown RBP9.61□□□□□ -0.87
CDKL5-209ENST00000635828 SDF4Q9BRK5 362 aa9.61□□□□□ -0.87
CDKL5-209ENST00000635828 DISC1Q9NRI5 854 aa9.61□□□□□ -0.87
CDKL5-209ENST00000635828 NOL7Q9UMY1 257 aaKnown RBP9.61□□□□□ -0.87
CDKL5-209ENST00000635828 EVPLQ92817 2033 aa9.61□□□□□ -0.87
CDKL5-209ENST00000635828 POTEB3A0JP26 581 aa9.61□□□□□ -0.87
CDKL5-209ENST00000635828 SPATA31C1P0DKV0 1188 aa9.61□□□□□ -0.87
CDKL5-209ENST00000635828 POTEBQ6S5H4 581 aa9.61□□□□□ -0.87
CDKL5-209ENST00000635828 POTEGQ6S5H5 508 aa9.61□□□□□ -0.87
CDKL5-209ENST00000635828 WNT8BQ93098 351 aa9.61□□□□□ -0.87
CDKL5-209ENST00000635828 OSBPL7Q9BZF2 842 aa9.61□□□□□ -0.87
CDKL5-209ENST00000635828 C5orf42Q9H799 3197 aa9.61□□□□□ -0.87
CDKL5-209ENST00000635828 SLITRK3O94933 977 aa9.6□□□□□ -0.87
CDKL5-209ENST00000635828 NEDD9Q14511 834 aa9.6□□□□□ -0.87
CDKL5-209ENST00000635828 MOXD1Q6UVY6 613 aa9.6□□□□□ -0.87
CDKL5-209ENST00000635828 NIPA1Q7RTP0 329 aa9.6□□□□□ -0.87
CDKL5-209ENST00000635828 CATSPER3Q86XQ3 398 aa9.6□□□□□ -0.87
CDKL5-209ENST00000635828 ZNF668Q96K58 619 aaPredicted RBP9.6□□□□□ -0.87
CDKL5-209ENST00000635828 TEKT3Q9BXF9 490 aa9.6□□□□□ -0.87
CDKL5-209ENST00000635828 AP5M1Q9H0R1 490 aa9.6□□□□□ -0.87
CDKL5-209ENST00000635828 PCDHA7Q9UN72 937 aa9.6□□□□□ -0.87
CDKL5-209ENST00000635828 IGBP1P78318 339 aa9.6□□□□□ -0.87
CDKL5-209ENST00000635828 LEO1Q8WVC0 666 aaPredicted RBP9.6□□□□□ -0.87
CDKL5-209ENST00000635828 CTAGE1Q96RT6 745 aa9.6□□□□□ -0.87
CDKL5-209ENST00000635828 UPF3AQ9H1J1 476 aaKnown RBP9.6□□□□□ -0.87
CDKL5-209ENST00000635828 TRMT13Q9NUP7 481 aaKnown RBP9.6□□□□□ -0.87
CDKL5-209ENST00000635828 SCN10AQ9Y5Y9 1956 aa9.6□□□□□ -0.87
CDKL5-209ENST00000635828 LOC102724159A0A0B4J2E5 919 aa9.6□□□□□ -0.87
CDKL5-209ENST00000635828 B4DLN1 442 aa9.6□□□□□ -0.87
CDKL5-209ENST00000635828 GCFC2P16383 781 aaKnown RBP9.6□□□□□ -0.87
CDKL5-209ENST00000635828 TRAPPC10P48553 1259 aa9.6□□□□□ -0.87
CDKL5-209ENST00000635828 NASPP49321 788 aaPredicted RBP9.6□□□□□ -0.87
CDKL5-209ENST00000635828 NPEPPSP55786 919 aa9.6□□□□□ -0.87
CDKL5-209ENST00000635828 LAMC2Q13753 1193 aa9.6□□□□□ -0.87
CDKL5-209ENST00000635828 SLC39A14Q15043 492 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms