RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 TRIM71Q2Q1W2 868 aaKnown RBP20.84■□□□□ 0.93
CLN6-210ENST00000635747 REXO1Q8N1G1 1221 aaKnown RBP20.84■□□□□ 0.93
CLN6-210ENST00000635747 TNPO1Q92973 898 aaKnown RBP20.84■□□□□ 0.93
CLN6-210ENST00000635747 PGBD1Q96JS3 809 aa20.84■□□□□ 0.93
CLN6-210ENST00000635747 SLC9A7Q96T83 725 aa20.84■□□□□ 0.93
CLN6-210ENST00000635747 SMARCAD1Q9H4L7 1026 aa20.84■□□□□ 0.93
CLN6-210ENST00000635747 JPH1Q9HDC5 661 aaPredicted RBP20.84■□□□□ 0.93
CLN6-210ENST00000635747 SH3GLB2Q9NR46 395 aa20.84■□□□□ 0.93
CLN6-210ENST00000635747 PDRG1Q9NUG6 133 aa20.84■□□□□ 0.93
CLN6-210ENST00000635747 ERAP1Q9NZ08 941 aa20.84■□□□□ 0.93
CLN6-210ENST00000635747 SLC9A2Q9UBY0 812 aa20.84■□□□□ 0.93
CLN6-210ENST00000635747 PCDHA11Q9Y5I1 949 aa20.84■□□□□ 0.93
CLN6-210ENST00000635747 EMSYQ7Z589 1322 aa20.83■□□□□ 0.93
CLN6-210ENST00000635747 GSTTP1A0A1W2PQM5 241 aa20.83■□□□□ 0.93
CLN6-210ENST00000635747 EFCAB14O75071 495 aa20.83■□□□□ 0.93
CLN6-210ENST00000635747 CYP3A4P08684 503 aa20.83■□□□□ 0.93
CLN6-210ENST00000635747 PBX2P40425 430 aa20.83■□□□□ 0.93
CLN6-210ENST00000635747 ZNF618Q5T7W0 954 aa20.83■□□□□ 0.93
CLN6-210ENST00000635747 JAKMIP3Q5VZ66 844 aa20.83■□□□□ 0.93
CLN6-210ENST00000635747 CNKSR3Q6P9H4 555 aa20.83■□□□□ 0.93
CLN6-210ENST00000635747 SLC17A8Q8NDX2 589 aa20.83■□□□□ 0.93
CLN6-210ENST00000635747 GLG1Q92896 1179 aa20.83■□□□□ 0.93
CLN6-210ENST00000635747 UPF3BQ9BZI7 483 aaKnown RBP20.83■□□□□ 0.93
CLN6-210ENST00000635747 SLC28A3Q9HAS3 691 aa20.83■□□□□ 0.93
CLN6-210ENST00000635747 TMEM260Q9NX78 707 aa20.83■□□□□ 0.93
CLN6-210ENST00000635747 PKD2L1Q9P0L9 805 aa20.83■□□□□ 0.93
CLN6-210ENST00000635747 TREHO43280 583 aa20.82■□□□□ 0.92
CLN6-210ENST00000635747 THPOP40225 353 aa20.82■□□□□ 0.92
CLN6-210ENST00000635747 SSRP1Q08945 709 aaKnown RBP20.82■□□□□ 0.92
CLN6-210ENST00000635747 HIC1Q14526 733 aa20.82■□□□□ 0.92
CLN6-210ENST00000635747 TRIM50Q86XT4 487 aa20.82■□□□□ 0.92
CLN6-210ENST00000635747 CYP2W1Q8TAV3 490 aa20.82■□□□□ 0.92
CLN6-210ENST00000635747 AZI2Q9H6S1 392 aa20.82■□□□□ 0.92
CLN6-210ENST00000635747 NCOA5Q9HCD5 579 aaKnown RBP20.82■□□□□ 0.92
CLN6-210ENST00000635747 SETD4Q9NVD3 440 aa20.82■□□□□ 0.92
CLN6-210ENST00000635747 CHD9Q3L8U1 2897 aa20.82■□□□□ 0.92
CLN6-210ENST00000635747 CDH23Q9H251 3354 aa20.81■□□□□ 0.92
CLN6-210ENST00000635747 RSPH10B2B2RC85 870 aa20.81■□□□□ 0.92
CLN6-210ENST00000635747 KIF28PB7ZC32 967 aa20.81■□□□□ 0.92
CLN6-210ENST00000635747 RSPH10BP0C881 870 aa20.81■□□□□ 0.92
CLN6-210ENST00000635747 KCNJ6P48051 423 aa20.81■□□□□ 0.92
CLN6-210ENST00000635747 GPNMBQ14956 572 aa20.81■□□□□ 0.92
CLN6-210ENST00000635747 GRIN2CQ14957 1233 aa20.81■□□□□ 0.92
CLN6-210ENST00000635747 FAM177A1Q8N128 213 aaPredicted RBP20.81■□□□□ 0.92
CLN6-210ENST00000635747 MYLIPQ8WY64 445 aa20.81■□□□□ 0.92
CLN6-210ENST00000635747 AGO4Q9HCK5 861 aaKnown RBP20.81■□□□□ 0.92
CLN6-210ENST00000635747 TELO2Q9Y4R8 837 aa20.81■□□□□ 0.92
CLN6-210ENST00000635747 ABHD14A-ACY1A0A1B0GW23 586 aa20.8■□□□□ 0.92
CLN6-210ENST00000635747 NBNO60934 754 aa20.8■□□□□ 0.92
CLN6-210ENST00000635747 LGR5O75473 907 aa20.8■□□□□ 0.92
CLN6-210ENST00000635747 ARP10275 920 aa20.8■□□□□ 0.92
CLN6-210ENST00000635747 FOSL2P15408 326 aa20.8■□□□□ 0.92
CLN6-210ENST00000635747 ADAM17P78536 824 aa20.8■□□□□ 0.92
CLN6-210ENST00000635747 SETQ01105 290 aaPredicted RBP20.8■□□□□ 0.92
CLN6-210ENST00000635747 IKBKEQ14164 716 aa20.8■□□□□ 0.92
CLN6-210ENST00000635747 CRYGNQ8WXF5 182 aa20.8■□□□□ 0.92
CLN6-210ENST00000635747 WNT8BQ93098 351 aa20.8■□□□□ 0.92
CLN6-210ENST00000635747 TANC1Q9C0D5 1861 aa20.79■□□□□ 0.92
CLN6-210ENST00000635747 TRIP12Q14669 1992 aaPredicted RBP20.79■□□□□ 0.92
CLN6-210ENST00000635747 DEXIO95424 95 aa20.79■□□□□ 0.92
CLN6-210ENST00000635747 RPLP2P05387 115 aaKnown RBP20.79■□□□□ 0.92
CLN6-210ENST00000635747 ACTR2P61160 394 aa20.79■□□□□ 0.92
CLN6-210ENST00000635747 PPFIA1Q13136 1202 aa20.79■□□□□ 0.92
CLN6-210ENST00000635747 ANKRD1Q15327 319 aa20.79■□□□□ 0.92
CLN6-210ENST00000635747 TAF2Q6P1X5 1199 aa20.79■□□□□ 0.92
CLN6-210ENST00000635747 TRAF7Q6Q0C0 670 aa20.79■□□□□ 0.92
CLN6-210ENST00000635747 PLPPR4Q7Z2D5 763 aa20.79■□□□□ 0.92
CLN6-210ENST00000635747 PLA2G4DQ86XP0 818 aa20.79■□□□□ 0.92
CLN6-210ENST00000635747 LMBR1Q8WVP7 490 aa20.79■□□□□ 0.92
CLN6-210ENST00000635747 GAS2L1Q99501 681 aaPredicted RBP20.79■□□□□ 0.92
CLN6-210ENST00000635747 C22orf23Q9BZE7 217 aa20.79■□□□□ 0.92
CLN6-210ENST00000635747 NKX2-4Q9H2Z4 354 aa20.79■□□□□ 0.92
CLN6-210ENST00000635747 YBX2Q9Y2T7 364 aaKnown RBP20.79■□□□□ 0.92
CLN6-210ENST00000635747 EYSQ5T1H1 3165 aa20.79■□□□□ 0.92
CLN6-210ENST00000635747 RRN3P2A6NIE6 340 aa20.78■□□□□ 0.92
CLN6-210ENST00000635747 CDKL5O76039 1030 aa20.78■□□□□ 0.92
CLN6-210ENST00000635747 SLC26A2P50443 739 aa20.78■□□□□ 0.92
CLN6-210ENST00000635747 RABGGTBP53611 331 aa20.78■□□□□ 0.92
CLN6-210ENST00000635747 NLRP5P59047 1200 aa20.78■□□□□ 0.92
CLN6-210ENST00000635747 RPAINQ86UA6 219 aa20.78■□□□□ 0.92
CLN6-210ENST00000635747 RSPH3Q86UC2 560 aa20.78■□□□□ 0.92
CLN6-210ENST00000635747 VPS54Q9P1Q0 977 aa20.78■□□□□ 0.92
CLN6-210ENST00000635747 SCN5AQ14524 2016 aa20.78■□□□□ 0.92
CLN6-210ENST00000635747 FAM86B1E9PN63 330 aa20.77■□□□□ 0.92
CLN6-210ENST00000635747 IPO5O00410 1097 aaKnown RBP20.77■□□□□ 0.92
CLN6-210ENST00000635747 PPFIA3O75145 1194 aa20.77■□□□□ 0.92
CLN6-210ENST00000635747 ATG7O95352 703 aa20.77■□□□□ 0.92
CLN6-210ENST00000635747 FAM86B2P0C5J1 330 aa20.77■□□□□ 0.92
CLN6-210ENST00000635747 MARK3P27448 753 aa20.77■□□□□ 0.92
CLN6-210ENST00000635747 CIITAP33076 1130 aa20.77■□□□□ 0.92
CLN6-210ENST00000635747 STAT5BP51692 787 aa20.77■□□□□ 0.92
CLN6-210ENST00000635747 WDR5P61964 334 aaKnown RBP20.77■□□□□ 0.92
CLN6-210ENST00000635747 STK3Q13188 491 aa20.77■□□□□ 0.92
CLN6-210ENST00000635747 ITGB3BPQ13352 177 aaPredicted RBP20.77■□□□□ 0.92
CLN6-210ENST00000635747 PPP2R2DQ66LE6 453 aa20.77■□□□□ 0.92
CLN6-210ENST00000635747 GALNT17Q6IS24 598 aa20.77■□□□□ 0.92
CLN6-210ENST00000635747 HERC6Q8IVU3 1022 aa20.77■□□□□ 0.92
CLN6-210ENST00000635747 MAFAQ8NHW3 353 aaPredicted RBP20.77■□□□□ 0.92
CLN6-210ENST00000635747 SLKQ9H2G2 1235 aaPredicted RBP20.77■□□□□ 0.92
CLN6-210ENST00000635747 TBC1D22BQ9NU19 505 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms