RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 LIMCH1Q9UPQ0 1083 aa17.84■□□□□ 0.45
LINC00339-207ENST00000634712 TELO2Q9Y4R8 837 aa17.84■□□□□ 0.45
LINC00339-207ENST00000634712 SLC34A2O95436 690 aa17.83■□□□□ 0.45
LINC00339-207ENST00000634712 RFC2P35250 354 aa17.83■□□□□ 0.45
LINC00339-207ENST00000634712 USP11P51784 963 aa17.83■□□□□ 0.45
LINC00339-207ENST00000634712 ZNF200P98182 395 aaPredicted RBP17.83■□□□□ 0.45
LINC00339-207ENST00000634712 PRR16Q569H4 304 aa17.83■□□□□ 0.45
LINC00339-207ENST00000634712 C16orf59Q7L2K0 433 aa17.83■□□□□ 0.45
LINC00339-207ENST00000634712 DEFB128Q7Z7B8 93 aa17.83■□□□□ 0.45
LINC00339-207ENST00000634712 CRYGNQ8WXF5 182 aa17.83■□□□□ 0.45
LINC00339-207ENST00000634712 RNPEPQ9H4A4 650 aa17.83■□□□□ 0.45
LINC00339-207ENST00000634712 ERAP1Q9NZ08 941 aa17.83■□□□□ 0.45
LINC00339-207ENST00000634712 KCNJ14Q9UNX9 436 aa17.83■□□□□ 0.45
LINC00339-207ENST00000634712 DDX39AO00148 427 aaKnown RBP17.82■□□□□ 0.44
LINC00339-207ENST00000634712 IPO5O00410 1097 aaKnown RBP17.82■□□□□ 0.44
LINC00339-207ENST00000634712 LARGE1O95461 756 aa17.82■□□□□ 0.44
LINC00339-207ENST00000634712 CTDNEP1O95476 244 aa17.82■□□□□ 0.44
LINC00339-207ENST00000634712 PFKMP08237 780 aa17.82■□□□□ 0.44
LINC00339-207ENST00000634712 IQCF3P0C7M6 154 aa17.82■□□□□ 0.44
LINC00339-207ENST00000634712 ACTR2P61160 394 aa17.82■□□□□ 0.44
LINC00339-207ENST00000634712 ITGB3BPQ13352 177 aaPredicted RBP17.82■□□□□ 0.44
LINC00339-207ENST00000634712 GPR153Q6NV75 609 aa17.82■□□□□ 0.44
LINC00339-207ENST00000634712 DAGLBQ8NCG7 672 aa17.82■□□□□ 0.44
LINC00339-207ENST00000634712 TBCKQ8TEA7 893 aa17.82■□□□□ 0.44
LINC00339-207ENST00000634712 AFAP1L1Q8TED9 768 aa17.82■□□□□ 0.44
LINC00339-207ENST00000634712 TNPO1Q92973 898 aaKnown RBP17.82■□□□□ 0.44
LINC00339-207ENST00000634712 FTOQ9C0B1 505 aaKnown RBP eCLIP17.82■□□□□ 0.44
LINC00339-207ENST00000634712 TBC1D22BQ9NU19 505 aa17.82■□□□□ 0.44
LINC00339-207ENST00000634712 LAMA3Q16787 3333 aa17.81■□□□□ 0.44
LINC00339-207ENST00000634712 IGLV3-22A0A075B6J6 115 aa17.81■□□□□ 0.44
LINC00339-207ENST00000634712 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.81■□□□□ 0.44
LINC00339-207ENST00000634712 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.81■□□□□ 0.44
LINC00339-207ENST00000634712 DTNBO60941 627 aa17.81■□□□□ 0.44
LINC00339-207ENST00000634712 ACTN1P12814 892 aa17.81■□□□□ 0.44
LINC00339-207ENST00000634712 SELPP16109 830 aa17.81■□□□□ 0.44
LINC00339-207ENST00000634712 MARK3P27448 753 aa17.81■□□□□ 0.44
LINC00339-207ENST00000634712 CIITAP33076 1130 aa17.81■□□□□ 0.44
LINC00339-207ENST00000634712 NONOQ15233 471 aaKnown RBP eCLIP17.81■□□□□ 0.44
LINC00339-207ENST00000634712 OTOP2Q7RTS6 562 aa17.81■□□□□ 0.44
LINC00339-207ENST00000634712 KRT25Q7Z3Z0 450 aa17.81■□□□□ 0.44
LINC00339-207ENST00000634712 UIMC1Q96RL1 719 aa17.81■□□□□ 0.44
LINC00339-207ENST00000634712 PHF20Q9BVI0 1012 aa17.81■□□□□ 0.44
LINC00339-207ENST00000634712 SETD4Q9NVD3 440 aa17.81■□□□□ 0.44
LINC00339-207ENST00000634712 CCDC194A0A1B0GVG4 234 aa17.8■□□□□ 0.44
LINC00339-207ENST00000634712 PARNO95453 639 aaKnown RBP17.8■□□□□ 0.44
LINC00339-207ENST00000634712 CKBP12277 381 aa17.8■□□□□ 0.44
LINC00339-207ENST00000634712 RBM25P49756 843 aaKnown RBP17.8■□□□□ 0.44
LINC00339-207ENST00000634712 SMAD3P84022 425 aaKnown RBP17.8■□□□□ 0.44
LINC00339-207ENST00000634712 TRIM29Q14134 588 aa17.8■□□□□ 0.44
LINC00339-207ENST00000634712 LRRC8DQ7L1W4 858 aa17.8■□□□□ 0.44
LINC00339-207ENST00000634712 HERVK_113Q902F9 699 aa17.8■□□□□ 0.44
LINC00339-207ENST00000634712 ZSCAN31Q96LW9 406 aaPredicted RBP17.8■□□□□ 0.44
LINC00339-207ENST00000634712 CTAGE1Q96RT6 745 aa17.8■□□□□ 0.44
LINC00339-207ENST00000634712 BRMS1Q9HCU9 246 aa17.8■□□□□ 0.44
LINC00339-207ENST00000634712 NRCAMQ92823 1304 aa17.8■□□□□ 0.44
LINC00339-207ENST00000634712 TRIP12Q14669 1992 aaPredicted RBP17.8■□□□□ 0.44
LINC00339-207ENST00000634712 ZBBXA8MT70 800 aa17.79■□□□□ 0.44
LINC00339-207ENST00000634712 BACH1O14867 736 aa17.79■□□□□ 0.44
LINC00339-207ENST00000634712 TREHO43280 583 aa17.79■□□□□ 0.44
LINC00339-207ENST00000634712 LGR5O75473 907 aa17.79■□□□□ 0.44
LINC00339-207ENST00000634712 THPOP40225 353 aa17.79■□□□□ 0.44
LINC00339-207ENST00000634712 STAT5BP51692 787 aa17.79■□□□□ 0.44
LINC00339-207ENST00000634712 PPFIA1Q13136 1202 aa17.79■□□□□ 0.44
LINC00339-207ENST00000634712 HIC1Q14526 733 aa17.79■□□□□ 0.44
LINC00339-207ENST00000634712 FAM160B1Q5W0V3 765 aa17.79■□□□□ 0.44
LINC00339-207ENST00000634712 MIS18BP1Q6P0N0 1132 aa17.79■□□□□ 0.44
LINC00339-207ENST00000634712 SERINC5Q86VE9 423 aa17.79■□□□□ 0.44
LINC00339-207ENST00000634712 NSUN7Q8NE18 718 aaKnown RBP17.79■□□□□ 0.44
LINC00339-207ENST00000634712 DHX38Q92620 1227 aaKnown RBP17.79■□□□□ 0.44
LINC00339-207ENST00000634712 EMSYQ7Z589 1322 aa17.79■□□□□ 0.44
LINC00339-207ENST00000634712 KAT6AQ92794 2004 aa17.79■□□□□ 0.44
LINC00339-207ENST00000634712 M0R2N6 131 aa17.79■□□□□ 0.44
LINC00339-207ENST00000634712 RBL2Q08999 1139 aa17.79■□□□□ 0.44
LINC00339-207ENST00000634712 RABEP1Q15276 862 aa17.79■□□□□ 0.44
LINC00339-207ENST00000634712 PLPPR4Q7Z2D5 763 aa17.79■□□□□ 0.44
LINC00339-207ENST00000634712 DEFB123Q8N688 67 aa17.79■□□□□ 0.44
LINC00339-207ENST00000634712 TRPC6Q9Y210 931 aa17.79■□□□□ 0.44
LINC00339-207ENST00000634712 DHX15O43143 795 aaKnown RBP17.78■□□□□ 0.44
LINC00339-207ENST00000634712 ST18O60284 1047 aa17.78■□□□□ 0.44
LINC00339-207ENST00000634712 ATG7O95352 703 aa17.78■□□□□ 0.44
LINC00339-207ENST00000634712 FDPSP14324 419 aaKnown RBP17.78■□□□□ 0.44
LINC00339-207ENST00000634712 HOXC8P31273 242 aa17.78■□□□□ 0.44
LINC00339-207ENST00000634712 KRT76Q01546 638 aa17.78■□□□□ 0.44
LINC00339-207ENST00000634712 NPY5RQ15761 445 aa17.78■□□□□ 0.44
LINC00339-207ENST00000634712 INF2Q27J81 1249 aa17.78■□□□□ 0.44
LINC00339-207ENST00000634712 ZNF618Q5T7W0 954 aa17.78■□□□□ 0.44
LINC00339-207ENST00000634712 ZNF746Q6NUN9 644 aaPredicted RBP17.78■□□□□ 0.44
LINC00339-207ENST00000634712 CCDC83Q8IWF9 413 aa17.78■□□□□ 0.44
LINC00339-207ENST00000634712 LMBR1Q8WVP7 490 aa17.78■□□□□ 0.44
LINC00339-207ENST00000634712 PCYT2Q99447 389 aa17.78■□□□□ 0.44
LINC00339-207ENST00000634712 KIF2CQ99661 725 aa17.78■□□□□ 0.44
LINC00339-207ENST00000634712 SH2B1Q9NRF2 756 aaPredicted RBP17.78■□□□□ 0.44
LINC00339-207ENST00000634712 GJB4Q9NTQ9 266 aa17.78■□□□□ 0.44
LINC00339-207ENST00000634712 SAMM50Q9Y512 469 aa17.78■□□□□ 0.44
LINC00339-207ENST00000634712 SLC4A7Q9Y6M7 1214 aa17.78■□□□□ 0.44
LINC00339-207ENST00000634712 RRN3P2A6NIE6 340 aa17.77■□□□□ 0.43
LINC00339-207ENST00000634712 RSPH10B2B2RC85 870 aa17.77■□□□□ 0.43
LINC00339-207ENST00000634712 MSH4O15457 936 aa17.77■□□□□ 0.43
LINC00339-207ENST00000634712 JAK2O60674 1132 aa17.77■□□□□ 0.43
LINC00339-207ENST00000634712 CCNE2O96020 404 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms