RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 M0QX08 132 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 AP1G1O43747 822 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 ZBED4O75132 1171 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 TADA3O75528 432 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 DGKIO75912 1065 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 STAU1O95793 577 aaKnown RBP5.46□□□□□ -1.54
SDCBP-213ENST00000630925 CAPNS1P04632 268 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 POLBP06746 335 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 HSPA5P11021 654 aaKnown RBP5.46□□□□□ -1.54
SDCBP-213ENST00000630925 KCNJ6P48051 423 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 SLC7A5Q01650 507 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 UBXN1Q04323 297 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 IFIT5Q13325 482 aaKnown RBP5.46□□□□□ -1.54
SDCBP-213ENST00000630925 MBTPS1Q14703 1052 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 TBCELQ5QJ74 424 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 IFIT1BQ5T764 474 aaKnown RBP5.46□□□□□ -1.54
SDCBP-213ENST00000630925 YOD1Q5VVQ6 348 aaPredicted RBP5.46□□□□□ -1.54
SDCBP-213ENST00000630925 ALKBH5Q6P6C2 394 aaKnown RBP5.46□□□□□ -1.54
SDCBP-213ENST00000630925 LRRC69Q6ZNQ3 347 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 ARHGEF18Q6ZSZ5 1173 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 KRT74Q7RTS7 529 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 NUP54Q7Z3B4 507 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 TAX1BP1Q86VP1 789 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 VPS52Q8N1B4 723 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 LRRC71Q8N4P6 559 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 TDRD7Q8NHU6 1098 aaKnown RBP5.46□□□□□ -1.54
SDCBP-213ENST00000630925 UTP15Q8TED0 518 aaKnown RBP5.46□□□□□ -1.54
SDCBP-213ENST00000630925 SLF1Q9BQI6 1058 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 NUCKS1Q9H1E3 243 aaKnown RBP5.46□□□□□ -1.54
SDCBP-213ENST00000630925 SPON1Q9HCB6 807 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 TCF7L2Q9NQB0 619 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 ARHGEF4Q9NR80 690 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 PAPOLBQ9NRJ5 636 aaKnown RBP5.46□□□□□ -1.54
SDCBP-213ENST00000630925 DKK3Q9UBP4 350 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 AASSQ9UDR5 926 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 SH3BGRL2Q9UJC5 107 aa5.46□□□□□ -1.54
SDCBP-213ENST00000630925 DISP1Q96F81 1524 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 PSDA5PKW4 1024 aaPredicted RBP5.45□□□□□ -1.54
SDCBP-213ENST00000630925 PCDHGA12O60330 932 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 DOK2O60496 412 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 NEMFO60524 1076 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 TPM3P06753 285 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 CKMT1AP12532 417 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 PCSK2P16519 638 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 HDCP19113 662 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 ATP4AP20648 1035 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 GUCY2CP25092 1073 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 HNF4AP41235 474 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 MTHFRP42898 656 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 MLECQ14165 292 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 ANKRD1Q15327 319 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 LLGL1Q15334 1064 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 TRIM61Q5EBN2 209 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 RUFY3Q7L099 469 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 PTRH1Q86Y79 214 aaKnown RBP5.45□□□□□ -1.54
SDCBP-213ENST00000630925 TRIML1Q8N9V2 468 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 ZMIZ2Q8NF64 920 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 C17orf50Q8WW18 174 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 NACC2Q96BF6 587 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 FAXDC2Q96IV6 333 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 FAM81BQ96LP2 452 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 NEK1Q96PY6 1258 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 ACO2Q99798 780 aaKnown RBP5.45□□□□□ -1.54
SDCBP-213ENST00000630925 TMEM120AQ9BXJ8 343 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 TEX13BQ9BXU2 312 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 GRPEL1Q9HAV7 217 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 RTEL1Q9NZ71 1219 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 ZHX1Q9UKY1 873 aaPredicted RBP5.45□□□□□ -1.54
SDCBP-213ENST00000630925 ZNF711Q9Y462 761 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 PCDHGC5Q9Y5F6 944 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 PCDHGA9Q9Y5G4 932 aaKnown RBP5.45□□□□□ -1.54
SDCBP-213ENST00000630925 PCDHGA8Q9Y5G5 932 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 PCDHGA7Q9Y5G6 932 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 PCDHGA6Q9Y5G7 932 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 PCDHGA3Q9Y5H0 932 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 PCDHGA2Q9Y5H1 932 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 SLC30A1Q9Y6M5 507 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 NEO1Q92859 1461 aa5.45□□□□□ -1.54
SDCBP-213ENST00000630925 WRNQ14191 1432 aaPredicted RBP eCLIP5.45□□□□□ -1.54
SDCBP-213ENST00000630925 PGPEP1LA6NFU8 196 aa5.44□□□□□ -1.54
SDCBP-213ENST00000630925 H0Y626 953 aa5.44□□□□□ -1.54
SDCBP-213ENST00000630925 NDC80O14777 642 aa5.44□□□□□ -1.54
SDCBP-213ENST00000630925 GRIN3BO60391 1043 aa5.44□□□□□ -1.54
SDCBP-213ENST00000630925 SOCS5O75159 536 aa5.44□□□□□ -1.54
SDCBP-213ENST00000630925 FBXO24O75426 580 aa5.44□□□□□ -1.54
SDCBP-213ENST00000630925 URI1O94763 535 aaPredicted RBP5.44□□□□□ -1.54
SDCBP-213ENST00000630925 SNX4O95219 450 aa5.44□□□□□ -1.54
SDCBP-213ENST00000630925 F13A1P00488 732 aa5.44□□□□□ -1.54
SDCBP-213ENST00000630925 TFE3P19532 575 aaPredicted RBP5.44□□□□□ -1.54
SDCBP-213ENST00000630925 PTPREP23469 700 aa5.44□□□□□ -1.54
SDCBP-213ENST00000630925 CNTFP26441 200 aa5.44□□□□□ -1.54
SDCBP-213ENST00000630925 PRIM2P49643 509 aa5.44□□□□□ -1.54
SDCBP-213ENST00000630925 NR1H2P55055 460 aa5.44□□□□□ -1.54
SDCBP-213ENST00000630925 POLR2FP61218 127 aaKnown RBP5.44□□□□□ -1.54
SDCBP-213ENST00000630925 CLCQ05315 142 aa5.44□□□□□ -1.54
SDCBP-213ENST00000630925 KLF1Q13351 362 aaPredicted RBP5.44□□□□□ -1.54
SDCBP-213ENST00000630925 BLMHQ13867 455 aa5.44□□□□□ -1.54
SDCBP-213ENST00000630925 PTPRNQ16849 979 aa5.44□□□□□ -1.54
SDCBP-213ENST00000630925 SKOR2Q2VWA4 1001 aaPredicted RBP5.44□□□□□ -1.54
SDCBP-213ENST00000630925 KIAA1211Q6ZU35 1233 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms