RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 VN1R2Q8NFZ6 395 aa13.95□□□□□ -0.18
CHD2-218ENST00000629346 KCNG4Q8TDN1 519 aa13.95□□□□□ -0.18
CHD2-218ENST00000629346 SMOC2Q9H3U7 446 aa13.95□□□□□ -0.18
CHD2-218ENST00000629346 ECHDC1Q9NTX5 307 aa13.95□□□□□ -0.18
CHD2-218ENST00000629346 DDX19BQ9UMR2 479 aa13.95□□□□□ -0.18
CHD2-218ENST00000629346 SUPT16HQ9Y5B9 1047 aaKnown RBP13.95□□□□□ -0.18
CHD2-218ENST00000629346 KIAA1217Q5T5P2 1943 aa13.95□□□□□ -0.18
CHD2-218ENST00000629346 BRD1O95696 1058 aa13.94□□□□□ -0.18
CHD2-218ENST00000629346 GOLGA8HP0CJ92 632 aa13.94□□□□□ -0.18
CHD2-218ENST00000629346 HOXC8P31273 242 aa13.94□□□□□ -0.18
CHD2-218ENST00000629346 ZNF543Q08ER8 600 aa13.94□□□□□ -0.18
CHD2-218ENST00000629346 MTMR3Q13615 1198 aa13.94□□□□□ -0.18
CHD2-218ENST00000629346 RRP12Q5JTH9 1297 aaKnown RBP13.94□□□□□ -0.18
CHD2-218ENST00000629346 ASTLQ6HA08 431 aaPredicted RBP13.94□□□□□ -0.18
CHD2-218ENST00000629346 KIAA2013Q8IYS2 634 aa13.94□□□□□ -0.18
CHD2-218ENST00000629346 UBA5Q9GZZ9 404 aa13.94□□□□□ -0.18
CHD2-218ENST00000629346 MFSD1Q9H3U5 465 aa13.94□□□□□ -0.18
CHD2-218ENST00000629346 MLXIPQ9HAP2 919 aa13.94□□□□□ -0.18
CHD2-218ENST00000629346 NCOR2Q9Y618 2525 aa13.94□□□□□ -0.18
CHD2-218ENST00000629346 CHRNA1P02708 482 aa13.93□□□□□ -0.18
CHD2-218ENST00000629346 SP2Q02086 613 aa13.93□□□□□ -0.18
CHD2-218ENST00000629346 NAALADL2Q58DX5 795 aa13.93□□□□□ -0.18
CHD2-218ENST00000629346 FAM26DQ5JW98 314 aa13.93□□□□□ -0.18
CHD2-218ENST00000629346 UBALD2Q8IYN6 164 aa13.93□□□□□ -0.18
CHD2-218ENST00000629346 ZFP91Q96JP5 570 aaPredicted RBP13.93□□□□□ -0.18
CHD2-218ENST00000629346 NEK1Q96PY6 1258 aa13.93□□□□□ -0.18
CHD2-218ENST00000629346 LRRCC1Q9C099 1032 aa13.93□□□□□ -0.18
CHD2-218ENST00000629346 CHMP4BQ9H444 224 aaKnown RBP13.93□□□□□ -0.18
CHD2-218ENST00000629346 BCAS3Q9H6U6 928 aa13.93□□□□□ -0.18
CHD2-218ENST00000629346 PXMP2Q9NR77 195 aa13.93□□□□□ -0.18
CHD2-218ENST00000629346 SORCS3Q9UPU3 1222 aa13.93□□□□□ -0.18
CHD2-218ENST00000629346 KMT2BQ9UMN6 2715 aaPredicted RBP13.93□□□□□ -0.18
CHD2-218ENST00000629346 CACNA1GO43497 2377 aa13.93□□□□□ -0.18
CHD2-218ENST00000629346 ABCB11O95342 1321 aa13.92□□□□□ -0.18
CHD2-218ENST00000629346 LGALS2P05162 132 aa13.92□□□□□ -0.18
CHD2-218ENST00000629346 GNAT1P11488 350 aa13.92□□□□□ -0.18
CHD2-218ENST00000629346 IBSPP21815 317 aaPredicted RBP13.92□□□□□ -0.18
CHD2-218ENST00000629346 TECP42680 631 aa13.92□□□□□ -0.18
CHD2-218ENST00000629346 ARHGAP4P98171 946 aa13.92□□□□□ -0.18
CHD2-218ENST00000629346 CDC37Q16543 378 aaPredicted RBP13.92□□□□□ -0.18
CHD2-218ENST00000629346 MCF2L2Q86YR7 1114 aa13.92□□□□□ -0.18
CHD2-218ENST00000629346 ATP8B4Q8TF62 1192 aa13.92□□□□□ -0.18
CHD2-218ENST00000629346 ZBTB40Q9NUA8 1239 aa13.92□□□□□ -0.18
CHD2-218ENST00000629346 DNAH14Q0VDD8 3507 aa13.92□□□□□ -0.18
CHD2-218ENST00000629346 CFBP00751 764 aa13.91□□□□□ -0.18
CHD2-218ENST00000629346 HSPD1P10809 573 aaKnown RBP13.91□□□□□ -0.18
CHD2-218ENST00000629346 UBA1P22314 1058 aaKnown RBP13.91□□□□□ -0.18
CHD2-218ENST00000629346 GATMP50440 423 aa13.91□□□□□ -0.18
CHD2-218ENST00000629346 LPIN1Q14693 890 aa13.91□□□□□ -0.18
CHD2-218ENST00000629346 LLGL2Q6P1M3 1020 aa13.91□□□□□ -0.18
CHD2-218ENST00000629346 CMTR2Q8IYT2 770 aaKnown RBP13.91□□□□□ -0.18
CHD2-218ENST00000629346 FLCNQ8NFG4 579 aa13.91□□□□□ -0.18
CHD2-218ENST00000629346 GPKOWQ92917 476 aaPredicted RBP eCLIP13.91□□□□□ -0.18
CHD2-218ENST00000629346 S1PR5Q9H228 398 aa13.91□□□□□ -0.18
CHD2-218ENST00000629346 CDH22Q9UJ99 828 aa13.91□□□□□ -0.18
CHD2-218ENST00000629346 NR2E1Q9Y466 385 aa13.91□□□□□ -0.18
CHD2-218ENST00000629346 EP300Q09472 2414 aaPredicted RBP13.91□□□□□ -0.18
CHD2-218ENST00000629346 NOP56O00567 594 aaKnown RBP13.9□□□□□ -0.18
CHD2-218ENST00000629346 FOXP2O15409 715 aa13.9□□□□□ -0.18
CHD2-218ENST00000629346 ORC4O43929 436 aa13.9□□□□□ -0.18
CHD2-218ENST00000629346 ASGR2P07307 311 aa13.9□□□□□ -0.18
CHD2-218ENST00000629346 ARP10275 920 aa13.9□□□□□ -0.18
CHD2-218ENST00000629346 CLCN5P51795 746 aa13.9□□□□□ -0.18
CHD2-218ENST00000629346 SPOUT1Q5T280 376 aaKnown RBP13.9□□□□□ -0.18
CHD2-218ENST00000629346 ANKRD54Q6NXT1 300 aa13.9□□□□□ -0.18
CHD2-218ENST00000629346 KCNV1Q6PIU1 500 aa13.9□□□□□ -0.18
CHD2-218ENST00000629346 LMBR1Q8WVP7 490 aa13.9□□□□□ -0.18
CHD2-218ENST00000629346 EHMT1Q9H9B1 1298 aa13.9□□□□□ -0.18
CHD2-218ENST00000629346 CCDC171Q6TFL3 1326 aa13.9□□□□□ -0.19
CHD2-218ENST00000629346 FRYLO94915 3013 aa13.89□□□□□ -0.19
CHD2-218ENST00000629346 C2CD4DB7Z1M9 353 aa13.89□□□□□ -0.19
CHD2-218ENST00000629346 SRGAP2BP0DMP2 458 aa13.89□□□□□ -0.19
CHD2-218ENST00000629346 ERVFC1P60507 584 aa13.89□□□□□ -0.19
CHD2-218ENST00000629346 PUM1Q14671 1186 aaKnown RBP eCLIP13.89□□□□□ -0.19
CHD2-218ENST00000629346 ANGPT1Q15389 498 aa13.89□□□□□ -0.19
CHD2-218ENST00000629346 DUSP6Q16828 381 aa13.89□□□□□ -0.19
CHD2-218ENST00000629346 UTP14CQ5TAP6 766 aaKnown RBP13.89□□□□□ -0.19
CHD2-218ENST00000629346 C20orf194Q5TEA3 1177 aa13.89□□□□□ -0.19
CHD2-218ENST00000629346 SYCE2Q6PIF2 218 aa13.89□□□□□ -0.19
CHD2-218ENST00000629346 RUFY4Q6ZNE9 571 aa13.89□□□□□ -0.19
CHD2-218ENST00000629346 TRIM50Q86XT4 487 aa13.89□□□□□ -0.19
CHD2-218ENST00000629346 LINC01599Q8WXQ3 324 aa13.89□□□□□ -0.19
CHD2-218ENST00000629346 HINFPQ9BQA5 517 aa13.89□□□□□ -0.19
CHD2-218ENST00000629346 PDCD2LQ9BRP1 358 aa13.89□□□□□ -0.19
CHD2-218ENST00000629346 USP26Q9BXU7 913 aa13.89□□□□□ -0.19
CHD2-218ENST00000629346 MRPL11Q9Y3B7 192 aaKnown RBP13.89□□□□□ -0.19
CHD2-218ENST00000629346 KIAA1671Q9BY89 1806 aa13.89□□□□□ -0.19
CHD2-218ENST00000629346 PI15O43692 258 aa13.88□□□□□ -0.19
CHD2-218ENST00000629346 DHX16O60231 1041 aaKnown RBP13.88□□□□□ -0.19
CHD2-218ENST00000629346 SNHG28P0DPA3 235 aa13.88□□□□□ -0.19
CHD2-218ENST00000629346 GPATCH4Q5T3I0 446 aaKnown RBP13.88□□□□□ -0.19
CHD2-218ENST00000629346 VPS53Q5VIR6 699 aa13.88□□□□□ -0.19
CHD2-218ENST00000629346 RTN4RL1Q86UN2 441 aaPredicted RBP13.88□□□□□ -0.19
CHD2-218ENST00000629346 ADGRF4Q8IZF3 695 aa13.88□□□□□ -0.19
CHD2-218ENST00000629346 IL31RAQ8NI17 732 aa13.88□□□□□ -0.19
CHD2-218ENST00000629346 GPATCH3Q96I76 525 aa13.88□□□□□ -0.19
CHD2-218ENST00000629346 MAF1Q9H063 256 aa13.88□□□□□ -0.19
CHD2-218ENST00000629346 VAT1LQ9HCJ6 419 aa13.88□□□□□ -0.19
CHD2-218ENST00000629346 TCP11L1Q9NUJ3 509 aa13.88□□□□□ -0.19
CHD2-218ENST00000629346 ANAPC4Q9UJX5 808 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms