RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 TELO2Q9Y4R8 837 aa14.31□□□□□ -0.12
SOX2-OT-247ENST00000628347 CNTNAP5Q8WYK1 1306 aa14.31□□□□□ -0.12
SOX2-OT-247ENST00000628347 NRCAMQ92823 1304 aa14.31□□□□□ -0.12
SOX2-OT-247ENST00000628347 SIP14410 1827 aa14.31□□□□□ -0.12
SOX2-OT-247ENST00000628347 BDP1A6H8Y1 2624 aa14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 COL4A6Q14031 1691 aa14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 LINC01553A4QN01 128 aa14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 SPDYE3A6NKU9 549 aa14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 ATP9AO75110 1047 aa14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 AMHP03971 560 aa14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 ITGB5P18084 799 aa14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 HTRA4P83105 476 aaPredicted RBP14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 UBE2SQ16763 222 aa14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 AAK1Q2M2I8 961 aa14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 UTP14CQ5TAP6 766 aaKnown RBP14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 PPP1R18Q6NYC8 613 aa14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 SYNE3Q6ZMZ3 975 aa14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 SPRED2Q7Z698 418 aa14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 MICU3Q86XE3 530 aa14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 SP7Q8TDD2 431 aaPredicted RBP14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 ADAMTS19Q8TE59 1207 aa14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 LMBR1Q8WVP7 490 aa14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 SEPT1Q8WYJ6 367 aa14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 SEPT8Q92599 483 aa14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 TGS1Q96RS0 853 aaKnown RBP14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 EHMT1Q9H9B1 1298 aa14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 PCDHA6Q9UN73 950 aa14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 INSL6Q9Y581 213 aa14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 PCDHA8Q9Y5H6 950 aa14.3□□□□□ -0.12
SOX2-OT-247ENST00000628347 GSTTP1A0A1W2PQM5 241 aa14.29□□□□□ -0.12
SOX2-OT-247ENST00000628347 hCG_1642624A0A1W2PR95 340 aa14.29□□□□□ -0.12
SOX2-OT-247ENST00000628347 hCG_1984214I3L0E3 225 aa14.29□□□□□ -0.12
SOX2-OT-247ENST00000628347 BMP1P13497 986 aa14.29□□□□□ -0.12
SOX2-OT-247ENST00000628347 TCF7P36402 384 aaPredicted RBP14.29□□□□□ -0.12
SOX2-OT-247ENST00000628347 RCAN1P53805 252 aa14.29□□□□□ -0.12
SOX2-OT-247ENST00000628347 ARHGAP4P98171 946 aa14.29□□□□□ -0.12
SOX2-OT-247ENST00000628347 FUT2Q10981 343 aa14.29□□□□□ -0.12
SOX2-OT-247ENST00000628347 KRT40Q6A162 431 aa14.29□□□□□ -0.12
SOX2-OT-247ENST00000628347 DHX32Q7L7V1 743 aaKnown RBP14.29□□□□□ -0.12
SOX2-OT-247ENST00000628347 RAB11FIP4Q86YS3 637 aa14.29□□□□□ -0.12
SOX2-OT-247ENST00000628347 CCDC82Q8N4S0 544 aa14.29□□□□□ -0.12
SOX2-OT-247ENST00000628347 ZNF713Q8N859 430 aaPredicted RBP14.29□□□□□ -0.12
SOX2-OT-247ENST00000628347 IL27Q8NEV9 243 aa14.29□□□□□ -0.12
SOX2-OT-247ENST00000628347 APBB2Q92870 758 aa14.29□□□□□ -0.12
SOX2-OT-247ENST00000628347 UHRF1Q96T88 793 aaPredicted RBP14.29□□□□□ -0.12
SOX2-OT-247ENST00000628347 JADE2Q9NQC1 790 aa14.29□□□□□ -0.12
SOX2-OT-247ENST00000628347 CTSHP09668 335 aa14.28□□□□□ -0.12
SOX2-OT-247ENST00000628347 SP4Q02446 784 aa14.28□□□□□ -0.12
SOX2-OT-247ENST00000628347 MTMR1Q13613 665 aa14.28□□□□□ -0.12
SOX2-OT-247ENST00000628347 KRT32Q14532 448 aa14.28□□□□□ -0.12
SOX2-OT-247ENST00000628347 WWC2Q6AWC2 1192 aa14.28□□□□□ -0.12
SOX2-OT-247ENST00000628347 TAF2Q6P1X5 1199 aa14.28□□□□□ -0.12
SOX2-OT-247ENST00000628347 HEATR3Q7Z4Q2 680 aa14.28□□□□□ -0.12
SOX2-OT-247ENST00000628347 GDPD5Q8WTR4 605 aa14.28□□□□□ -0.12
SOX2-OT-247ENST00000628347 TOP1MTQ969P6 601 aa14.28□□□□□ -0.12
SOX2-OT-247ENST00000628347 SUGCTQ9HAC7 445 aa14.28□□□□□ -0.12
SOX2-OT-247ENST00000628347 RIC8AQ9NPQ8 531 aa14.28□□□□□ -0.12
SOX2-OT-247ENST00000628347 ERAP1Q9NZ08 941 aa14.28□□□□□ -0.12
SOX2-OT-247ENST00000628347 NFASCO94856 1347 aa14.27□□□□□ -0.12
SOX2-OT-247ENST00000628347 MBLAC1A4D2B0 266 aaPredicted RBP14.27□□□□□ -0.13
SOX2-OT-247ENST00000628347 ZBTB43O43298 467 aa14.27□□□□□ -0.13
SOX2-OT-247ENST00000628347 CDC45O75419 566 aa14.27□□□□□ -0.13
SOX2-OT-247ENST00000628347 FOSP01100 380 aaPredicted RBP14.27□□□□□ -0.13
SOX2-OT-247ENST00000628347 TFF2Q03403 129 aa14.27□□□□□ -0.13
SOX2-OT-247ENST00000628347 PPFIA1Q13136 1202 aa14.27□□□□□ -0.13
SOX2-OT-247ENST00000628347 SKIV2LQ15477 1246 aaKnown RBP14.27□□□□□ -0.13
SOX2-OT-247ENST00000628347 RTN1Q16799 776 aa14.27□□□□□ -0.13
SOX2-OT-247ENST00000628347 TYW1BQ6NUM6 668 aa14.27□□□□□ -0.13
SOX2-OT-247ENST00000628347 RASEFQ8IZ41 740 aa14.27□□□□□ -0.13
SOX2-OT-247ENST00000628347 MYOCDQ8IZQ8 938 aa14.27□□□□□ -0.13
SOX2-OT-247ENST00000628347 SAMD11Q96NU1 681 aa14.27□□□□□ -0.13
SOX2-OT-247ENST00000628347 MXRA8Q9BRK3 442 aa14.27□□□□□ -0.13
SOX2-OT-247ENST00000628347 OSBPL7Q9BZF2 842 aa14.27□□□□□ -0.13
SOX2-OT-247ENST00000628347 GLT8D2Q9H1C3 349 aa14.27□□□□□ -0.13
SOX2-OT-247ENST00000628347 SMARCAD1Q9H4L7 1026 aa14.27□□□□□ -0.13
SOX2-OT-247ENST00000628347 BRPF3Q9ULD4 1205 aa14.27□□□□□ -0.13
SOX2-OT-247ENST00000628347 BRWD1Q9NSI6 2320 aa14.27□□□□□ -0.13
SOX2-OT-247ENST00000628347 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.26□□□□□ -0.13
SOX2-OT-247ENST00000628347 RPLP2P05387 115 aaKnown RBP14.26□□□□□ -0.13
SOX2-OT-247ENST00000628347 HMGB1P09429 215 aaKnown RBP14.26□□□□□ -0.13
SOX2-OT-247ENST00000628347 NAPAP54920 295 aa14.26□□□□□ -0.13
SOX2-OT-247ENST00000628347 MGAT3Q09327 533 aa14.26□□□□□ -0.13
SOX2-OT-247ENST00000628347 GRIK4Q16099 956 aa14.26□□□□□ -0.13
SOX2-OT-247ENST00000628347 ADCK5Q3MIX3 580 aa14.26□□□□□ -0.13
SOX2-OT-247ENST00000628347 FAM117BQ6P1L5 589 aa14.26□□□□□ -0.13
SOX2-OT-247ENST00000628347 SKAP1Q86WV1 359 aa14.26□□□□□ -0.13
SOX2-OT-247ENST00000628347 KCNB2Q92953 911 aa14.26□□□□□ -0.13
SOX2-OT-247ENST00000628347 HLA-CQ95604 372 aa14.26□□□□□ -0.13
SOX2-OT-247ENST00000628347 IFIH1Q9BYX4 1025 aaKnown RBP14.26□□□□□ -0.13
SOX2-OT-247ENST00000628347 JPH1Q9HDC5 661 aaPredicted RBP14.26□□□□□ -0.13
SOX2-OT-247ENST00000628347 FAM217BQ9NTX9 383 aaPredicted RBP14.26□□□□□ -0.13
SOX2-OT-247ENST00000628347 TCF20Q9UGU0 1960 aaKnown RBP14.25□□□□□ -0.13
SOX2-OT-247ENST00000628347 RRN3P2A6NIE6 340 aa14.25□□□□□ -0.13
SOX2-OT-247ENST00000628347 STXBP3O00186 592 aa14.25□□□□□ -0.13
SOX2-OT-247ENST00000628347 CHRNA1P02708 482 aa14.25□□□□□ -0.13
SOX2-OT-247ENST00000628347 CLK2P49760 499 aaKnown RBP14.25□□□□□ -0.13
SOX2-OT-247ENST00000628347 ADCY7P51828 1080 aa14.25□□□□□ -0.13
SOX2-OT-247ENST00000628347 AP3B2Q13367 1082 aa14.25□□□□□ -0.13
SOX2-OT-247ENST00000628347 MARCH8Q5T0T0 291 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms